Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 0.0e+00 1355.9 684 100.0
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 0.0e+00 1092.4 734 79.2
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 1.4e-253 879.8 682 67.9
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 1.0e-248 863.6 713 64.4
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 2.9e-248 862.1 723 64.3
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 4.3e-247 858.2 713 64.0
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 1.0e-245 853.6 716 63.7
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 3.1e-245 852.0 716 64.0
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 5.2e-245 851.3 709 64.0
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 1.5e-244 849.7 716 63.3
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 2.0e-244 849.4 712 63.6
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 3.7e-243 845.1 729 62.7
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 1.4e-242 843.2 712 63.2
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 2.4e-242 842.4 719 64.4
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 3.2e-242 842.0 717 63.5
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 3.2e-242 842.0 716 63.1
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.5e-241 838.6 724 62.3
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.6e-241 838.2 713 62.6
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 7.8e-241 837.4 716 62.6
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 3.9e-240 835.1 716 62.4
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 8.6e-240 833.9 716 62.7
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 1.2e-238 830.1 724 62.3
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 6.2e-238 827.8 725 61.8
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.1e-237 827.0 726 61.7
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 1.5e-236 823.2 713 62.3
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 2.2e-235 819.3 713 62.0
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 9.2e-234 813.9 729 59.7
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.2e-233 813.5 754 58.9
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 1.2e-233 813.5 719 61.2
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.2e-233 813.5 717 61.6
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 6.0e-233 811.2 719 60.5
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 7.8e-233 810.8 700 63.1
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 7.8e-233 810.8 713 61.3
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.3e-232 810.1 729 60.4
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 8.6e-232 807.4 724 61.0
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.5e-231 806.6 715 60.6
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 2.5e-231 805.8 714 61.5
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 5.6e-231 804.7 711 60.1
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 8.1e-230 800.8 711 59.9
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 4.0e-229 798.5 714 60.9
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 8.9e-229 797.3 731 60.2
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 2.0e-228 796.2 711 60.5
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 3.4e-228 795.4 722 60.4
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 3.4e-228 795.4 713 59.9
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 5.8e-228 794.7 696 62.5
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 1.3e-227 793.5 714 61.5
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 3.7e-227 792.0 717 59.7
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 4.9e-227 791.6 717 60.4
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 8.3e-227 790.8 725 60.0
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 4.1e-226 788.5 715 61.3
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 7.1e-226 787.7 729 60.2
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 9.2e-226 787.3 729 58.2
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 2.7e-225 785.8 734 59.4
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 3.5e-225 785.4 717 60.0
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 4.6e-225 785.0 730 59.6
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 4.6e-225 785.0 713 61.0
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 6.0e-225 784.6 725 59.3
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 1.7e-224 783.1 728 60.2
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 6.6e-224 781.2 774 57.0
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 1.5e-223 780.0 721 59.8
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 1.5e-223 780.0 732 59.3
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 2.5e-223 779.2 746 58.2
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.5e-223 779.2 755 57.1
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 4.3e-223 778.5 711 59.1
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 4.3e-223 778.5 729 59.0
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.1e-222 776.2 727 60.1
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.8e-221 773.1 721 59.9
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.8e-221 773.1 656 63.4
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 2.4e-221 772.7 703 60.3
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 3.1e-221 772.3 728 59.9
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 5.2e-221 771.5 720 59.6
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 2.6e-220 769.2 728 58.4
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 4.4e-220 768.5 737 60.0
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 9.9e-220 767.3 712 60.1
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 2.9e-219 765.8 734 58.3
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.9e-219 765.8 757 57.7
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.2e-217 760.4 746 58.0
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 4.6e-217 758.4 715 57.9
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 2.3e-216 756.1 714 58.5
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 6.6e-216 754.6 717 58.7
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 5.6e-215 751.5 724 57.9
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 7.3e-215 751.1 714 57.1
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 1.3e-214 750.4 717 58.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 8.1e-214 747.7 699 60.2
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.0e-213 745.3 436 89.2
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.5e-212 743.4 454 85.0
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 2.6e-212 742.7 718 58.1
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 1.3e-211 740.3 718 57.9
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 2.9e-211 739.2 718 57.9
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 3.3e-207 725.7 699 58.1
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 4.0e-205 718.8 662 59.8
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 5.8e-204 714.9 713 55.1
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.9e-203 712.6 684 57.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 5.6e-199 698.4 658 59.6
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 8.7e-192 674.5 818 48.8
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 2.4e-181 639.8 726 49.7
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.5e-175 620.5 729 48.4
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.4e-170 604.0 539 60.9
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 3.1e-165 586.3 504 63.3
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 3.4e-151 539.7 460 62.6
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.3e-142 511.1 572 50.9
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 1.3e-139 501.1 428 61.9
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.0e-136 491.5 617 48.1
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 5.2e-136 489.2 413 63.0
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 4.4e-135 486.1 417 60.9
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.1e-125 454.9 403 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 1.6e-121 441.0 627 42.6
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 5.4e-117 426.0 395 57.0
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 3.0e-115 420.2 399 56.6
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.8e-113 413.7 378 58.5
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 8.1e-113 412.1 359 60.4
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.4e-111 406.8 359 59.9
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 5.1e-107 392.9 362 58.6
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 3.6e-105 386.7 392 55.1
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 5.1e-83 313.2 195 79.0
Zm00001eb098830 Zea mays HOM05D004674 ORTHO05D007261 2.5e-61 241.1 168 70.2
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 8.8e-59 232.6 151 78.1
TAR376G0549 Trochodendron aralioides HOM05D004674 ORTHO05D007261 8.8e-59 232.6 131 90.1
vmacro19462 Vaccinium macrocarpon HOM05D004674 ORTHO05D007261 3.8e-54 217.2 139 78.4
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 2.0e-50 204.9 226 50.9
Zm00001eb124970 Zea mays HOM05D004674 ORTHO05D007261 3.1e-48 197.6 136 72.8
Psat4g095680 Pisum sativum HOM05D004674 ORTHO05D007261 1.1e-40 172.6 105 81.0
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 5.3e-40 170.2 266 40.6
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 1.1e-37 162.5 93 87.1
Atru.chr3.653 Acer truncatum HOM05D004674 ORTHO05D007261 1.9e-37 161.8 94 80.9
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 9.4e-37 159.5 142 60.6
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 8.0e-36 156.4 300 38.0
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 2.6e-34 151.4 162 56.8
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 4.4e-34 150.6 156 55.1
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 5.7e-34 150.2 135 61.5
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 3.1e-32 144.4 388 32.5
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 3.2e-29 134.4 112 59.8
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.6e-28 131.0 112 56.2
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.6e-28 131.0 112 56.2
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 1.2e-23 115.9 71 76.1
Psat2g002040 Pisum sativum HOM05D004674 ORTHO05D327579 4.3e-21 107.5 132 47.0
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 3.6e-20 104.4 90 54.4
MD02G1142900 Malus domestica HOM05D004674 ORTHO05D007261 1.4e-19 102.4 103 61.2
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 7.5e-18 96.7 74 60.8
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 5.4e-16 90.5 58 69.0
Zm00001eb334700 Zea mays HOM05D004674 ORTHO05D007261 1.2e-15 89.4 71 64.8
Gohir.A06G159466 Gossypium hirsutum HOM05D004674 ORTHO05D029177 3.5e-15 87.8 51 84.3
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 5.9e-15 87.0 58 65.5
FAN23G1600 Fragaria x ananassa HOM05D004674 ORTHO05D045629 5.0e-14 84.0 79 57.0
Gorai.010G192800 Gossypium raimondii HOM05D004674 ORTHO05D029177 6.6e-14 83.6 51 80.4
FAN14G4531 Fragaria x ananassa HOM05D004674 ORTHO05D020551 1.4e-11 75.9 85 51.8
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 9.8e-10 69.7 44 72.7
SGA_v2.0_scaffold257G45676 Striga asiatica HOM05D004674 ORTHO05D051422 6.0e-07 60.5 51 52.9


User provided reference genes

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