Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0177 Trochodendron aralioides HOM05D005561 ORTHO05D006834 6.3e-63 243.8 113 100.0
GSVIVG01013397001 Vitis vinifera HOM05D005561 ORTHO05D006834 4.4e-48 194.5 113 80.5
COL.COLO4_35541 Corchorus olitorius HOM05D005561 ORTHO05D006834 5.7e-48 194.1 113 77.9
CANSAT78G2155 Cannabis sativa HOM05D005561 ORTHO05D006834 7.5e-48 193.7 113 77.0
Lj4C7T6 Lonicera japonica HOM05D005561 ORTHO05D006834 1.3e-47 193.0 113 81.4
Thecc.08G062600 Theobroma cacao HOM05D005561 ORTHO05D006834 1.3e-47 193.0 113 77.9
Dinv31967 Davidia involucrata HOM05D005561 ORTHO05D006834 1.7e-47 192.6 113 78.8
Duzib041G0482 Durio zibethinus HOM05D005561 ORTHO05D006834 2.2e-47 192.2 113 77.0
Duzib116G0146 Durio zibethinus HOM05D005561 ORTHO05D006834 6.3e-47 190.7 113 77.0
Psat5g009720 Pisum sativum HOM05D005561 ORTHO05D006834 6.3e-47 190.7 113 77.9
Gohir.A01G103500 Gossypium hirsutum HOM05D005561 ORTHO05D006834 8.2e-47 190.3 113 76.1
Gohir.D01G088800 Gossypium hirsutum HOM05D005561 ORTHO05D006834 8.2e-47 190.3 113 76.1
Gorai.002G114500 Gossypium raimondii HOM05D005561 ORTHO05D006834 8.2e-47 190.3 113 76.1
CSS0019163 Camellia sinensis var. sinensis HOM05D005561 ORTHO05D006834 1.4e-46 189.5 113 77.9
Ca_15401_v3 Cicer arietinum L. HOM05D005561 ORTHO05D006834 1.8e-46 189.1 113 77.0
Nn5g31005 Nelumbo nucifera HOM05D005561 ORTHO05D006834 2.4e-46 188.7 113 78.8
TPR.G38189 Trifolium pratense HOM05D005561 ORTHO05D006834 4.1e-46 188.0 113 76.1
Prupe.5G009000 Prunus persica HOM05D005561 ORTHO05D006834 5.3e-46 187.6 113 75.2
Cfa014114 Carpinus fangiana HOM05D005561 ORTHO05D006834 7.0e-46 187.2 113 75.2
Haze_22832 Corylus avellana HOM05D005561 ORTHO05D006834 7.0e-46 187.2 113 75.2
Medtr3g115870 Medicago truncatula HOM05D005561 ORTHO05D006834 7.0e-46 187.2 113 75.2
ClCG08G009280 Citrullus lanatus HOM05D005561 ORTHO05D006834 9.1e-46 186.8 113 73.5
Manes.05G124800 Manihot esculenta HOM05D005561 ORTHO05D006834 1.2e-45 186.4 113 74.3
Ciclev10000678m.g Citrus clementina HOM05D005561 ORTHO05D006834 1.6e-45 186.0 113 74.3
DCAR_016786 Daucus carota HOM05D005561 ORTHO05D006834 1.6e-45 186.0 113 74.3
FAN13G3253 Fragaria x ananassa HOM05D005561 ORTHO05D006834 1.6e-45 186.0 113 74.3
MD06G1007100 Malus domestica HOM05D005561 ORTHO05D006834 2.0e-45 185.7 113 74.3
arahy.Tifrunner.gnm1.ann1.NG9QQJ Arachis hypogaea HOM05D005561 ORTHO05D006834 2.7e-45 185.3 113 74.3
CsaV3_6G031410 Cucumis sativus L. HOM05D005561 ORTHO05D006834 3.5e-45 184.9 113 72.6
Ah.11g041760 Amaranthus hybridus HOM05D005561 ORTHO05D006834 4.5e-45 184.5 113 71.7
MELO3C026526.2 Cucumis melo HOM05D005561 ORTHO05D006834 4.5e-45 184.5 113 72.6
Lj1g0007073 Lotus japonicus HOM05D005561 ORTHO05D006834 4.5e-45 184.5 113 74.3
Rhsim06G0005100 Rhododendron simsii HOM05D005561 ORTHO05D006834 4.5e-45 184.5 113 75.2
Potri.002G007700 Populus trichocarpa HOM05D005561 ORTHO05D006834 5.9e-45 184.1 113 73.5
QL02p015136 Quercus lobata HOM05D005561 ORTHO05D006834 7.7e-45 183.7 112 73.2
CSS0027936 Camellia sinensis var. sinensis HOM05D005561 ORTHO05D006834 1.0e-44 183.3 113 73.5
vmacro21786 Vaccinium macrocarpon HOM05D005561 ORTHO05D006834 1.3e-44 183.0 113 75.2
Glyma.04G016300 Glycine max HOM05D005561 ORTHO05D006834 1.7e-44 182.6 113 74.3
FvH4_5g25640 Fragaria vesca HOM05D005561 ORTHO05D006834 2.2e-44 182.2 113 73.5
FAN04G1314 Fragaria x ananassa HOM05D005561 ORTHO05D006834 2.2e-44 182.2 113 73.5
FAN18G1577 Fragaria x ananassa HOM05D005561 ORTHO05D006834 2.2e-44 182.2 113 73.5
Duzib093G0247 Durio zibethinus HOM05D005561 ORTHO05D006834 2.9e-44 181.8 113 74.3
Sabra05G0196600 Salix brachista HOM05D005561 ORTHO05D006834 2.9e-44 181.8 113 72.6
Cpa.g.sc26.163 Carica papaya HOM05D005561 ORTHO05D006834 3.8e-44 181.4 113 71.7
Glyma.06G016400 Glycine max HOM05D005561 ORTHO05D006834 5.0e-44 181.0 113 74.3
Oeu026110.1 Olea europaea HOM05D005561 ORTHO05D006834 5.0e-44 181.0 113 72.6
RcHm_v2.0_Chr7g0215931 Rosa chinensis HOM05D005561 ORTHO05D006834 5.0e-44 181.0 113 73.5
Sc02g0009190 Simmondsia chinensis HOM05D005561 ORTHO05D006834 5.0e-44 181.0 113 71.7
Lalb_Chr11g0061481 Lupinus albus HOM05D005561 ORTHO05D006834 6.5e-44 180.6 113 74.3
Potri.005G253500 Populus trichocarpa HOM05D005561 ORTHO05D006834 6.5e-44 180.6 113 71.7
TWI56G0057 Tripterygium wilfordii HOM05D005561 ORTHO05D006834 6.5e-44 180.6 113 72.6
Ciclev10009595m.g Citrus clementina HOM05D005561 ORTHO05D006834 8.5e-44 180.3 113 70.8
FAN08G1213 Fragaria x ananassa HOM05D005561 ORTHO05D006834 8.5e-44 180.3 113 72.6
Oeu016877.1 Olea europaea HOM05D005561 ORTHO05D006834 8.5e-44 180.3 113 73.5
PSO210G6209 Papaver somniferum HOM05D005561 ORTHO05D006834 8.5e-44 180.3 113 72.6
EL10Ac1g01911 Beta vulgaris HOM05D005561 ORTHO05D006834 1.1e-43 179.9 113 70.8
Lalb_Chr23g0265661 Lupinus albus HOM05D005561 ORTHO05D006834 1.1e-43 179.9 113 73.5
CiPaw.07G135900 Carya illinoinensis HOM05D005561 ORTHO05D006834 1.9e-43 179.1 113 73.5
VMungo1309G3038 Vigna mungo HOM05D005561 ORTHO05D006834 2.5e-43 178.7 113 70.8
PSO170G1066 Papaver somniferum HOM05D005561 ORTHO05D006834 3.2e-43 178.3 113 71.7
TWI36G1622 Tripterygium wilfordii HOM05D005561 ORTHO05D006834 3.2e-43 178.3 113 73.5
Atru.chr13.103 Acer truncatum HOM05D005561 ORTHO05D006834 4.2e-43 177.9 113 70.8
Cc10_g00480 Coffea canephora HOM05D005561 ORTHO05D006834 4.2e-43 177.9 113 72.6
Phvul.009G012500 Phaseolus vulgaris HOM05D005561 ORTHO05D006834 4.2e-43 177.9 113 70.8
Sed0010562 Sechium edule HOM05D005561 ORTHO05D006834 4.2e-43 177.9 113 70.8
AUR62042576 Chenopodium quinoa HOM05D005561 ORTHO05D006834 5.5e-43 177.6 113 69.9
AUR62035143 Chenopodium quinoa HOM05D005561 ORTHO05D006834 7.2e-43 177.2 113 69.9
Eucgr.F01790 Eucalyptus grandis HOM05D005561 ORTHO05D006834 3.6e-42 174.9 113 71.7
MD00G1113700 Malus domestica HOM05D005561 ORTHO05D006834 3.6e-42 174.9 113 70.8
CAN.G311.134 Capsicum annuum HOM05D005561 ORTHO05D006834 4.7e-42 174.5 113 71.7
Nitab4.5_0001208g0070 Nicotiana tabacum HOM05D005561 ORTHO05D006834 6.1e-42 174.1 113 70.8
Peaxi162Scf00680g00110 Petunia axillaris HOM05D005561 ORTHO05D006834 6.1e-42 174.1 113 71.7
CDE05G2424 Ceratophyllum demersum HOM05D005561 ORTHO05D006834 8.0e-42 173.7 113 70.8
MSTRG.992 Avicennia marina HOM05D005561 ORTHO05D006834 1.0e-41 173.3 113 69.0
Aqoxy5G00977 Aquilegia oxysepala HOM05D005561 ORTHO05D006834 1.8e-41 172.6 113 68.1
AUR62042579 Chenopodium quinoa HOM05D005561 ORTHO05D006834 1.8e-41 172.6 109 69.7
PGSC0003DMG400009989 Solanum tuberosum HOM05D005561 ORTHO05D006834 1.8e-41 172.6 113 70.8
THA.LOC104801947 Tarenaya hassleriana HOM05D005561 ORTHO05D006834 2.3e-41 172.2 113 68.1
Nitab4.5_0009646g0070 Nicotiana tabacum HOM05D005561 ORTHO05D006834 3.0e-41 171.8 113 69.9
MBI05_g33302_MAGBIO Magnolia biondii HOM05D005561 ORTHO05D006834 4.0e-41 171.4 113 69.9
Solyc04g082580.3 Solanum lycopersicum HOM05D005561 ORTHO05D006834 4.0e-41 171.4 113 69.9
Sopen04g036210 Solanum pennellii HOM05D005561 ORTHO05D006834 4.0e-41 171.4 113 69.9
Nitab4.5_0000383g0380 Nicotiana tabacum HOM05D005561 ORTHO05D006834 6.8e-41 170.6 113 69.9
ECA238G1647 Erigeron canadensis HOM05D005561 ORTHO05D006834 2.6e-40 168.7 113 64.6
HanXRQChr05g0144831 Helianthus annuus HOM05D005561 ORTHO05D006834 3.4e-40 168.3 113 67.3
Aa31LG9G12500 Aethionema arabicum HOM05D005561 ORTHO05D006834 1.7e-39 166.0 114 65.8
MSTRG.22092 Avicennia marina HOM05D005561 ORTHO05D006834 1.7e-39 166.0 113 70.8
unitig_22.g5815 Utricularia gibba HOM05D005561 ORTHO05D006834 4.8e-39 164.5 113 65.5
Lsat_1_v5_gn_2_1901 Lactuca sativa HOM05D005561 ORTHO05D006834 6.3e-39 164.1 113 64.6
SEGI_19604 Sequoiadendron giganteum HOM05D005561 ORTHO05D006834 1.1e-38 163.3 113 63.7
SEGI_32322 Sequoiadendron giganteum HOM05D005561 ORTHO05D006834 1.1e-38 163.3 113 63.7
ECA232G0027 Erigeron canadensis HOM05D005561 ORTHO05D006834 1.4e-38 162.9 113 64.6
HanXRQChr15g0492491 Helianthus annuus HOM05D005561 ORTHO05D006834 4.1e-38 161.4 113 66.4
BcaB07g31083 Brassica carinata HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
BcaC04g22001 Brassica carinata HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
BcaNung05251 Brassica carinata HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
A09p19610 Brassica napus HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
C09p24980 Brassica napus HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
BolC9t55390H Brassica oleracea HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
BraA09t37572Z Brassica rapa HOM05D005561 ORTHO05D006834 7.0e-38 160.6 114 65.8
AL8G19220 Arabidopsis lyrata HOM05D005561 ORTHO05D006834 3.5e-37 158.3 114 64.0
Thhalv10003171m.g Eutrema salsugineum HOM05D005561 ORTHO05D006834 3.5e-37 158.3 114 64.9
AT5G42360 Arabidopsis thaliana HOM05D005561 ORTHO05D006834 1.0e-36 156.8 114 64.0
Carub.0008s0680 Capsella rubella HOM05D005561 ORTHO05D006834 1.0e-36 156.8 114 64.0
AL8G19230 Arabidopsis lyrata HOM05D005561 ORTHO05D006834 1.3e-36 156.4 114 63.2
AT5G42350 Arabidopsis thaliana HOM05D005561 ORTHO05D006834 2.2e-36 155.6 114 63.2
CARHR284980 Cardamine hirsuta HOM05D005561 ORTHO05D006834 2.9e-36 155.2 114 63.2
PGR083G0762 Punica granatum HOM05D005561 ORTHO05D006834 3.8e-36 154.8 113 61.1
SalBow6G7068 Salvia bowleyana HOM05D005561 ORTHO05D006834 5.0e-36 154.5 116 66.4
HanXRQChr06g0185211 Helianthus annuus HOM05D005561 ORTHO05D006834 8.5e-36 153.7 114 62.3
Migut.N02971 Erythranthe guttata HOM05D005561 ORTHO05D006834 1.1e-35 153.3 116 64.7
Sp7g08210 Schrenkiella parvula HOM05D005561 ORTHO05D006834 1.5e-35 152.9 114 62.3
Lsat_1_v5_gn_9_45721 Lactuca sativa HOM05D005561 ORTHO05D006834 2.5e-35 152.1 119 61.3
ATR0807G210 Amborella trichopoda HOM05D005561 ORTHO05D006834 3.2e-35 151.8 114 64.0
SalBow1G8439 Salvia bowleyana HOM05D005561 ORTHO05D006834 3.6e-34 148.3 116 62.1
SalBow7G4605 Salvia bowleyana HOM05D005561 ORTHO05D006834 3.6e-34 148.3 116 62.1
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 7.5e-32 140.6 109 62.4
Zm00001eb320670 Zea mays HOM05D005561 ORTHO05D006834 2.8e-31 138.7 113 55.8
Sabra02G0006100 Salix brachista HOM05D005561 ORTHO05D006834 1.3e-28 129.8 75 76.0
Os09g0555300 Oryza sativa ssp. japonica HOM05D005561 ORTHO05D006834 8.0e-26 120.6 116 50.9
CARHR284990 Cardamine hirsuta HOM05D005561 ORTHO05D006834 8.9e-25 117.1 114 49.1
Mapoly0107s0031 Marchantia polymorpha HOM05D005561 ORTHO05D006834 7.5e-24 114.0 104 53.8
Actinidia17061 Actinidia chinensis HOM05D005561 ORTHO05D006834 1.8e-09 66.2 40 72.5


User provided reference genes

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