Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 8.3e-67 256.9 131 100.0
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 2.5e-31 139.0 166 50.0
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 4.8e-30 134.8 166 48.2
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.4e-29 133.3 165 49.1
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 3.1e-29 132.1 164 48.2
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 6.9e-29 131.0 140 55.0
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 9.0e-29 130.6 167 49.1
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 9.0e-29 130.6 167 49.1
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 1.2e-28 130.2 166 47.0
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 2.0e-28 129.4 163 48.5
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 2.0e-28 129.4 167 49.1
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 7.6e-28 127.5 166 47.0
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 2.9e-27 125.6 166 45.8
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 3.8e-27 125.2 141 48.9
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 4.9e-27 124.8 163 48.5
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 6.4e-27 124.4 166 47.0
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 8.4e-27 124.0 141 54.6
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 2.4e-26 122.5 141 48.2
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 2.4e-26 122.5 167 46.7
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 5.5e-26 121.3 166 45.8
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 5.5e-26 121.3 167 45.5
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 7.1e-26 120.9 167 46.1
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 9.3e-26 120.6 140 50.7
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 1.6e-25 119.8 139 51.1
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 2.1e-25 119.4 167 43.7
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 2.7e-25 119.0 167 45.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 2.7e-25 119.0 166 42.2
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 6.0e-25 117.9 140 50.7
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 6.0e-25 117.9 140 50.7
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 6.0e-25 117.9 166 44.6
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 7.9e-25 117.5 166 41.6
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 3.0e-24 115.5 158 46.8
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 5.1e-24 114.8 163 45.4
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 2.5e-23 112.5 167 43.1
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 2.5e-23 112.5 141 46.1
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 3.3e-23 112.1 158 46.2
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 3.3e-23 112.1 166 42.2
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 4.3e-23 111.7 140 45.7
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 5.6e-23 111.3 140 46.4
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 5.6e-23 111.3 163 42.9
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 9.6e-23 110.5 134 48.5
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 1.6e-22 109.8 155 45.2
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 1.6e-22 109.8 155 45.2
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 2.8e-22 109.0 152 44.1
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 2.8e-22 109.0 166 43.4
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 2.8e-22 109.0 140 44.3
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 2.8e-22 109.0 166 41.0
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 3.7e-22 108.6 162 42.0
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 4.8e-22 108.2 166 44.0
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 4.8e-22 108.2 162 41.4
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 6.2e-22 107.8 139 46.0
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 6.2e-22 107.8 141 44.0
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 8.1e-22 107.5 162 41.4
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 1.8e-21 106.3 166 40.4
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 2.4e-21 105.9 139 45.3
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 5.3e-21 104.8 136 47.1
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 5.3e-21 104.8 166 39.8
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 5.3e-21 104.8 162 40.7
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 5.3e-21 104.8 164 40.9
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 6.9e-21 104.4 163 39.9
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 9.0e-21 104.0 162 41.4
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 1.5e-20 103.2 162 40.1
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 1.5e-20 103.2 155 41.9
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 2.0e-20 102.8 162 38.9
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 2.0e-20 102.8 166 40.4
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 2.0e-20 102.8 163 38.7
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 3.4e-20 102.1 158 40.5
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 3.4e-20 102.1 164 38.4
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 7.6e-20 100.9 162 40.1
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 7.6e-20 100.9 137 43.8
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 1.0e-19 100.5 146 41.8
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 1.3e-19 100.1 162 41.4
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 2.9e-19 99.0 162 39.5
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 2.9e-19 99.0 160 41.9
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 3.8e-19 98.6 167 41.3
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 4.9e-19 98.2 136 42.6
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 4.9e-19 98.2 162 40.7
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 6.5e-19 97.8 159 40.3
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 8.4e-19 97.4 166 38.6
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 8.4e-19 97.4 166 39.2
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 1.4e-18 96.7 166 37.3
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 1.4e-18 96.7 162 38.3
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 4.2e-18 95.1 166 39.2
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 5.5e-18 94.7 166 37.3
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 7.1e-18 94.4 162 38.9
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 7.1e-18 94.4 160 39.4
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 9.3e-18 94.0 162 38.3
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 9.3e-18 94.0 162 38.9
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 1.2e-17 93.6 135 41.5
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 1.6e-17 93.2 162 38.9
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.6e-17 93.2 164 38.4
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.6e-17 93.2 166 37.3
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 3.5e-17 92.0 165 39.4
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 6.0e-17 91.3 166 37.3
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 2.5e-15 85.9 140 37.9
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.5e-15 85.9 140 37.9
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.5e-15 85.9 140 37.9
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.5e-15 85.9 140 37.9
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 2.1e-14 82.8 137 37.2
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.1e-14 82.8 140 37.1
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.1e-13 80.5 160 34.4
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.0e-12 76.3 162 34.6
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.9e-10 69.7 149 33.6
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 5.5e-10 68.2 73 52.1
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 2.5e-07 59.3 121 31.4


User provided reference genes

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