Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0099 Trochodendron aralioides HOM05D004012 ORTHO05D004752 2.5e-196 688.7 382 100.0
TAR628G1247 Trochodendron aralioides HOM05D004012 ORTHO05D004752 1.9e-175 619.4 412 78.6
Nn5g27391 Nelumbo nucifera HOM05D004012 ORTHO05D004752 1.6e-171 606.3 382 80.4
Dinv19127 Davidia involucrata HOM05D004012 ORTHO05D004752 5.4e-159 564.7 384 75.8
Aqoxy5G01862 Aquilegia oxysepala HOM05D004012 ORTHO05D004752 5.1e-157 558.1 382 73.0
MBI10_g20270_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 1.1e-156 557.0 382 73.6
Dinv26833 Davidia involucrata HOM05D004012 ORTHO05D004752 1.6e-155 553.1 387 72.1
GSVIVG01000257001 Vitis vinifera HOM05D004012 ORTHO05D004752 4.0e-154 548.5 381 73.5
Hma1.2p1_3052F.1_g332140 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 1.3e-152 543.5 382 72.5
Manes.13G154600 Manihot esculenta HOM05D004012 ORTHO05D004752 1.7e-152 543.1 382 72.3
Sc16g0009950 Simmondsia chinensis HOM05D004012 ORTHO05D004752 2.2e-152 542.7 382 71.7
Hund07194 Selenicereus undatus HOM05D004012 ORTHO05D004752 3.8e-152 542.0 382 72.3
CSS0025733 Camellia sinensis var. sinensis HOM05D004012 ORTHO05D004752 1.9e-151 539.7 382 73.0
Hma1.2p1_0513F.1_g169610 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 3.2e-151 538.9 382 72.0
AUR62006937 Chenopodium quinoa HOM05D004012 ORTHO05D004752 1.6e-150 536.6 382 72.0
PSO210G3799 Papaver somniferum HOM05D004012 ORTHO05D004752 1.0e-149 533.9 382 79.1
PSO761G0211 Papaver somniferum HOM05D004012 ORTHO05D004752 1.3e-149 533.5 382 79.1
AUR62000581 Chenopodium quinoa HOM05D004012 ORTHO05D004752 1.8e-149 533.1 382 71.7
CiPaw.15G186100 Carya illinoinensis HOM05D004012 ORTHO05D004752 3.9e-149 531.9 381 70.3
SalBow1G0131 Salvia bowleyana HOM05D004012 ORTHO05D004752 1.5e-148 530.0 381 69.3
Potri.017G122600 Populus trichocarpa HOM05D004012 ORTHO05D004752 3.7e-147 525.4 382 69.4
Migut.D01135 Erythranthe guttata HOM05D004012 ORTHO05D004752 4.8e-147 525.0 382 68.1
MSTRG.9397 Avicennia marina HOM05D004012 ORTHO05D004752 1.8e-146 523.1 382 67.8
Rhsim01G0147700 Rhododendron simsii HOM05D004012 ORTHO05D004752 2.4e-146 522.7 410 68.3
Atru.chr3.1437 Acer truncatum HOM05D004012 ORTHO05D004752 4.0e-146 521.9 379 69.7
Sopen04g017040 Solanum pennellii HOM05D004012 ORTHO05D004752 4.0e-146 521.9 382 70.2
Oeu034405.1 Olea europaea HOM05D004012 ORTHO05D004752 5.8e-145 518.1 382 68.8
CAN.G10.8 Capsicum annuum HOM05D004012 ORTHO05D004752 7.6e-145 517.7 382 69.6
Gohir.A10G084900 Gossypium hirsutum HOM05D004012 ORTHO05D004752 1.3e-144 516.9 382 69.4
Gohir.D10G106700 Gossypium hirsutum HOM05D004012 ORTHO05D004752 1.3e-144 516.9 382 69.4
Gorai.011G116800 Gossypium raimondii HOM05D004012 ORTHO05D004752 1.3e-144 516.9 382 69.4
ClCG02G000230 Citrullus lanatus HOM05D004012 ORTHO05D004752 1.7e-144 516.5 393 66.9
CsaV3_2G019600 Cucumis sativus L. HOM05D004012 ORTHO05D004752 3.8e-144 515.4 382 68.3
FvH4_5g20280 Fragaria vesca HOM05D004012 ORTHO05D004752 4.9e-144 515.0 385 68.6
FAN18G2241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.9e-143 513.1 385 68.3
Cc07_g20580 Coffea canephora HOM05D004012 ORTHO05D004752 3.2e-143 512.3 382 68.3
Lalb_Chr01g0020921 Lupinus albus HOM05D004012 ORTHO05D004752 3.2e-143 512.3 382 67.8
MELO3C023211.2 Cucumis melo HOM05D004012 ORTHO05D004752 4.2e-143 511.9 382 67.5
Lj6g0017875 Lotus japonicus HOM05D004012 ORTHO05D004752 4.2e-143 511.9 382 66.5
RcHm_v2.0_Chr7g0205341 Rosa chinensis HOM05D004012 ORTHO05D004752 4.2e-143 511.9 385 67.5
MSTRG.4671 Avicennia marina HOM05D004012 ORTHO05D004752 7.1e-143 511.1 382 66.8
FAN08G1522 Fragaria x ananassa HOM05D004012 ORTHO05D004752 9.3e-143 510.8 385 68.1
ECA238G2948 Erigeron canadensis HOM05D004012 ORTHO05D004752 1.2e-142 510.4 382 68.8
Glyma.02G005000 Glycine max HOM05D004012 ORTHO05D004752 2.1e-142 509.6 382 67.0
CANSAT54G0087 Cannabis sativa HOM05D004012 ORTHO05D004752 2.7e-142 509.2 383 67.4
FAN04G0350 Fragaria x ananassa HOM05D004012 ORTHO05D004752 3.5e-142 508.8 385 68.1
Phvul.007G277800 Phaseolus vulgaris HOM05D004012 ORTHO05D004752 1.3e-141 506.9 382 66.8
Lalb_Chr03g0037441 Lupinus albus HOM05D004012 ORTHO05D004752 1.8e-141 506.5 382 67.0
VMungo0720G3057 Vigna mungo HOM05D004012 ORTHO05D004752 3.0e-141 505.8 382 66.8
Cc07_g20480 Coffea canephora HOM05D004012 ORTHO05D004752 3.9e-141 505.4 382 68.1
Prupe.5G058000 Prunus persica HOM05D004012 ORTHO05D004752 3.9e-141 505.4 385 68.6
CDE05G2224 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 6.7e-141 504.6 380 67.1
MD04G1052500 Malus domestica HOM05D004012 ORTHO05D004752 7.4e-140 501.1 385 68.6
arahy.Tifrunner.gnm1.ann1.5Q2P9B Arachis hypogaea HOM05D004012 ORTHO05D004752 3.7e-139 498.8 381 65.6
arahy.Tifrunner.gnm1.ann1.EZQ64B Arachis hypogaea HOM05D004012 ORTHO05D004752 3.7e-139 498.8 381 65.6
Eucgr.I00032 Eucalyptus grandis HOM05D004012 ORTHO05D004752 3.1e-138 495.7 381 66.4
HanXRQChr13g0402671 Helianthus annuus HOM05D004012 ORTHO05D004752 1.5e-137 493.4 381 66.4
PGR119G2008 Punica granatum HOM05D004012 ORTHO05D004752 1.5e-137 493.4 381 64.8
Sed0016932 Sechium edule HOM05D004012 ORTHO05D004752 2.6e-137 492.7 382 66.2
ATR1089G159 Amborella trichopoda HOM05D004012 ORTHO05D004752 4.5e-137 491.9 381 66.4
MD06G1047700 Malus domestica HOM05D004012 ORTHO05D004752 7.6e-137 491.1 385 67.0
Lalb_Chr19g0127941 Lupinus albus HOM05D004012 ORTHO05D004752 8.4e-136 487.6 382 65.4
TWI31G0701 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 1.1e-135 487.3 382 66.0
EL10Ac4g09708 Beta vulgaris HOM05D004012 ORTHO05D004752 1.2e-134 483.8 383 66.8
DCAR_009624 Daucus carota HOM05D004012 ORTHO05D004752 7.9e-134 481.1 426 60.3
vmacro21003 Vaccinium macrocarpon HOM05D004012 ORTHO05D004752 7.9e-134 481.1 411 63.0
HPP92_005635 Vanilla planifolia HOM05D004012 ORTHO05D004752 8.7e-133 477.6 351 69.2
Ca_12160_v3 Cicer arietinum L. HOM05D004012 ORTHO05D004752 9.7e-132 474.2 382 62.0
MBI06_g32154_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 2.0e-129 466.5 317 72.6
Lsat_1_v5_gn_0_9061 Lactuca sativa HOM05D004012 ORTHO05D004752 1.3e-128 463.8 381 64.6
Duzib147G1077 Durio zibethinus HOM05D004012 ORTHO05D004752 2.2e-128 463.0 358 67.6
Glyma.10G003500 Glycine max HOM05D004012 ORTHO05D004752 6.5e-128 461.5 349 65.6
Psat6g104000 Pisum sativum HOM05D004012 ORTHO05D004752 1.4e-127 460.3 402 60.0
CDE05G3168 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 3.2e-127 459.1 386 63.0
unitig_0.g354 Utricularia gibba HOM05D004012 ORTHO05D004752 7.2e-127 458.0 378 61.1
Sabra04G0062100 Salix brachista HOM05D004012 ORTHO05D004752 2.3e-125 453.0 368 63.3
SGA_v2.0_scaffold14G07064 Striga asiatica HOM05D004012 ORTHO05D004752 5.1e-125 451.8 385 61.3
Medtr1g041405 Medicago truncatula HOM05D004012 ORTHO05D004752 6.7e-125 451.4 401 58.6
Potri.004G092400 Populus trichocarpa HOM05D004012 ORTHO05D004752 2.5e-124 449.5 351 65.0
TPR.G25177 Trifolium pratense HOM05D004012 ORTHO05D004752 4.8e-123 445.3 396 59.1
TWI79G0644 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 6.3e-123 444.9 354 65.8
Aa31LG11G11210 Aethionema arabicum HOM05D004012 ORTHO05D004752 1.2e-121 440.7 383 56.9
Mapoly0005s0018 Marchantia polymorpha HOM05D004012 ORTHO05D004752 1.5e-121 440.3 382 59.2
AL6G29670 Arabidopsis lyrata HOM05D004012 ORTHO05D004752 1.3e-120 437.2 384 58.1
Carub.0006s1668 Capsella rubella HOM05D004012 ORTHO05D004752 5.0e-120 435.3 384 58.1
Thhalv10013606m.g Eutrema salsugineum HOM05D004012 ORTHO05D004752 8.5e-120 434.5 383 57.4
Ciclev10005092m.g Citrus clementina HOM05D004012 ORTHO05D004752 1.1e-119 434.1 290 72.1
Sabra17G0101400 Salix brachista HOM05D004012 ORTHO05D004752 1.9e-119 433.3 390 59.0
Sp6g25900 Schrenkiella parvula HOM05D004012 ORTHO05D004752 4.2e-119 432.2 383 57.4
Sabra17G0104000 Salix brachista HOM05D004012 ORTHO05D004752 7.2e-119 431.4 390 58.7
Thecc.01G145600 Theobroma cacao HOM05D004012 ORTHO05D004752 3.6e-118 429.1 291 71.8
Actinidia14359 Actinidia chinensis HOM05D004012 ORTHO05D004752 7.9e-118 427.9 415 58.1
AT5G18420 Arabidopsis thaliana HOM05D004012 ORTHO05D004752 7.9e-118 427.9 382 56.8
Lsat_1_v5_gn_5_118080 Lactuca sativa HOM05D004012 ORTHO05D004752 1.4e-117 427.2 382 61.5
Duzib187G0370 Durio zibethinus HOM05D004012 ORTHO05D004752 3.9e-117 425.6 328 67.1
Eucgr.I00085 Eucalyptus grandis HOM05D004012 ORTHO05D004752 3.9e-117 425.6 334 64.4
Actinidia12239 Actinidia chinensis HOM05D004012 ORTHO05D004752 8.8e-117 424.5 309 69.3
C09p58260 Brassica napus HOM05D004012 ORTHO05D004752 1.3e-115 420.6 383 56.4
A10p21150 Brassica napus HOM05D004012 ORTHO05D004752 1.7e-115 420.2 383 56.4
Os11g0240900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 1.7e-115 420.2 383 58.0
BraA10t44178Z Brassica rapa HOM05D004012 ORTHO05D004752 2.2e-115 419.9 384 56.2
BolC9t58691H Brassica oleracea HOM05D004012 ORTHO05D004752 6.3e-115 418.3 384 55.7
CARHR194600 Cardamine hirsuta HOM05D004012 ORTHO05D004752 8.2e-115 417.9 384 56.5
BcaB08g36680 Brassica carinata HOM05D004012 ORTHO05D004752 1.4e-114 417.2 383 56.1
Pp3c20_12330 Physcomitrium patens HOM05D004012 ORTHO05D004752 4.1e-114 415.6 381 56.7
BraA03t10211Z Brassica rapa HOM05D004012 ORTHO05D004752 2.0e-113 413.3 385 55.6
Lj4A823T24 Lonicera japonica HOM05D004012 ORTHO05D004752 5.9e-113 411.8 304 69.1
Duzib264G1318 Durio zibethinus HOM05D004012 ORTHO05D004752 1.3e-112 410.6 351 61.8
BolC3t13514H Brassica oleracea HOM05D004012 ORTHO05D004752 2.9e-112 409.5 385 55.3
Actinidia30855 Actinidia chinensis HOM05D004012 ORTHO05D004752 1.1e-111 407.5 382 59.9
Pp3c24_6950 Physcomitrium patens HOM05D004012 ORTHO05D004752 1.1e-111 407.5 381 55.9
Zm00001eb112220 Zea mays HOM05D004012 ORTHO05D004752 8.8e-109 397.9 389 57.1
THA.LOC104806688 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 2.6e-108 396.4 386 54.1
CBR_g22449 Chara braunii HOM05D004012 ORTHO05D004752 7.7e-105 384.8 385 54.5
FAN13G1241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.0e-104 384.4 281 67.6
Pp3c23_1780 Physcomitrium patens HOM05D004012 ORTHO05D004752 1.3e-104 384.0 353 56.9
Zm00001eb167940 Zea mays HOM05D004012 ORTHO05D004752 1.3e-104 384.0 383 56.7
Ah.02g118090 Amaranthus hybridus HOM05D004012 ORTHO05D004752 1.3e-99 367.5 306 61.8
C03p10330 Brassica napus HOM05D004012 ORTHO05D004752 1.0e-96 357.8 354 52.3
Nitab4.5_0000064g0090 Nicotiana tabacum HOM05D004012 ORTHO05D004752 1.9e-87 327.0 227 69.6
DCAR_019944 Daucus carota HOM05D004012 ORTHO05D004752 5.6e-87 325.5 291 60.1
Peaxi162Scf00621g00412 Petunia axillaris HOM05D004012 ORTHO05D004752 2.1e-86 323.6 234 67.1
Cpa.g.sc138.55 Carica papaya HOM05D004012 ORTHO05D004752 5.2e-85 318.9 226 67.7
Solyc04g024500.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 1.2e-84 317.8 227 68.3
Oeu036288.1 Olea europaea HOM05D004012 ORTHO05D004752 1.5e-84 317.4 227 66.1
SMO196G0070 Selaginella moellendorffii HOM05D004012 ORTHO05D004752 2.0e-84 317.0 278 60.4
PGSC0003DMG401004242 Solanum tuberosum HOM05D004012 ORTHO05D004752 2.6e-84 316.6 227 68.3
Nitab4.5_0005261g0010 Nicotiana tabacum HOM05D004012 ORTHO05D004752 5.9e-81 305.4 219 67.6
Cc07_g20540 Coffea canephora HOM05D004012 ORTHO05D004752 1.3e-80 304.3 292 55.1
AagrBONN_evm.TU.Sc2ySwM_228.2915 Anthoceros agrestis HOM05D004012 ORTHO05D004752 8.6e-80 301.6 276 55.8
Ah.06g188310 Amaranthus hybridus HOM05D004012 ORTHO05D004752 2.7e-73 280.0 193 67.9
QL10p034897 Quercus lobata HOM05D004012 ORTHO05D004752 3.4e-68 263.1 163 72.4
BcaC04g18693 Brassica carinata HOM05D004012 ORTHO05D004752 3.7e-67 259.6 388 43.6
Lju41A56G29 Lonicera japonica HOM05D004012 ORTHO05D004752 6.0e-65 252.3 314 46.2
Zm00001eb138450 Zea mays HOM05D004012 ORTHO05D004752 7.8e-65 251.9 228 57.9
HPP92_005646 Vanilla planifolia HOM05D004012 ORTHO05D004752 6.6e-56 222.2 182 61.5
Solyc04g024510.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 4.4e-52 209.5 157 72.6
Nitab4.5_0000064g0100 Nicotiana tabacum HOM05D004012 ORTHO05D004752 5.8e-52 209.1 177 65.5
Peaxi162Scf00621g00413 Petunia axillaris HOM05D004012 ORTHO05D004752 7.6e-52 208.8 155 72.9
Nitab4.5_0005261g0020 Nicotiana tabacum HOM05D004012 ORTHO05D004752 1.3e-51 208.0 156 71.8
SEGI_14103 Sequoiadendron giganteum HOM05D004012 ORTHO05D004752 2.9e-51 206.8 156 71.2
Haze_19373 Corylus avellana HOM05D004012 ORTHO05D004752 4.2e-50 203.0 157 70.7
HPP92_005645 Vanilla planifolia HOM05D004012 ORTHO05D004752 2.5e-47 193.7 153 69.9
Cre17.g726800 Chlamydomonas reinhardtii HOM05D004012 ORTHO05D004752 1.1e-45 188.3 456 34.2
SHI03102 Sapria himalayana HOM05D004012 ORTHO05D004752 1.1e-45 188.3 145 58.6
HPP92_005679 Vanilla planifolia HOM05D004012 ORTHO05D004752 2.0e-44 184.1 226 47.8
Os12g0197900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 2.4e-42 177.2 141 67.4
THA.LOC104799828 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 2.7e-41 173.7 184 53.8
PGSC0003DMG402004242 Solanum tuberosum HOM05D004012 ORTHO05D004752 1.6e-38 164.5 133 69.2
Lsat_1_v5_gn_2_19540 Lactuca sativa HOM05D004012 ORTHO05D004752 9.0e-37 158.7 182 50.5
DCAR_015558 Daucus carota HOM05D004012 ORTHO05D004752 7.4e-31 139.0 124 61.3
BcaNung06869 Brassica carinata HOM05D004012 ORTHO05D004752 5.3e-29 132.9 132 60.6
TPR.G34339 Trifolium pratense HOM05D004012 ORTHO05D004752 3.9e-24 116.7 193 40.9
Cpa.g.sc138.54 Carica papaya HOM05D004012 ORTHO05D004752 3.3e-23 113.6 99 64.6
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 1.8e-21 107.8 64 82.8
SHI03103 Sapria himalayana HOM05D004012 ORTHO05D004752 9.0e-21 105.5 178 40.4
Ciclev10006318m.g Citrus clementina HOM05D004012 ORTHO05D004752 2.0e-20 104.4 58 91.4
Oeu046377.1 Olea europaea HOM05D004012 ORTHO05D004752 2.0e-20 104.4 56 96.4
Lju41A56T30 Lonicera japonica HOM05D004012 ORTHO05D004752 7.2e-18 95.9 146 42.5
QL10p034900 Quercus lobata HOM05D004012 ORTHO05D004752 1.2e-17 95.1 65 75.4
Haze_27454 Corylus avellana HOM05D004012 ORTHO05D004752 6.1e-17 92.8 129 41.9
PSO761G0569 Papaver somniferum HOM05D004012 ORTHO05D004752 1.4e-13 81.6 57 70.2
MCO14G229 Micromonas commoda HOM05D004012 ORTHO05D004752 2.9e-11 73.9 215 29.3
Actinidia12240 Actinidia chinensis HOM05D004012 ORTHO05D004752 4.2e-10 70.1 45 75.6
Cc07_g20530 Coffea canephora HOM05D004012 ORTHO05D004752 1.5e-07 61.6 50 60.0


User provided reference genes

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