Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.2e-73 279.6 133 100.0
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.5e-39 166.4 79 92.4
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.2e-33 146.7 80 80.0
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 8.0e-33 144.1 80 78.8
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.4e-32 143.3 80 76.2
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.2e-31 140.2 80 73.8
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.2e-31 140.2 80 73.8
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.5e-31 139.8 80 75.0
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 7.5e-31 137.5 101 62.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 7.5e-31 137.5 80 70.0
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 7.5e-31 137.5 80 70.0
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.7e-30 136.3 131 51.9
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 2.8e-30 135.6 137 50.4
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 2.8e-30 135.6 80 67.5
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.8e-30 135.6 80 67.5
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.8e-30 135.6 80 67.5
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.8e-30 135.6 81 70.4
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 3.7e-30 135.2 80 70.0
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.8e-30 134.8 143 46.2
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 4.8e-30 134.8 77 76.6
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.8e-29 132.9 81 65.4
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.8e-29 132.9 77 72.7
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.1e-29 132.1 81 65.4
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 3.1e-29 132.1 86 65.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 4.1e-29 131.7 82 70.7
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 4.1e-29 131.7 86 65.1
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 4.1e-29 131.7 79 72.2
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 7.0e-29 131.0 86 64.0
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.2e-28 130.2 139 48.2
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.2e-28 130.2 139 48.2
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.2e-28 130.2 106 59.4
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 2.0e-28 129.4 80 68.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.0e-28 129.4 150 44.7
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 2.7e-28 129.0 79 65.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 3.5e-28 128.6 80 70.0
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 3.5e-28 128.6 81 67.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 3.5e-28 128.6 81 67.9
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 4.5e-28 128.3 142 47.2
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 4.5e-28 128.3 143 46.2
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 5.9e-28 127.9 79 68.4
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 7.7e-28 127.5 80 65.0
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.7e-27 126.3 79 70.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.7e-27 126.3 84 64.3
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.7e-27 126.3 84 64.3
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.7e-27 126.3 79 64.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.7e-27 126.3 79 65.8
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 1.7e-27 126.3 116 52.6
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.7e-27 126.3 145 44.1
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 2.2e-27 125.9 79 64.6
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 2.2e-27 125.9 82 65.9
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 2.9e-27 125.6 140 47.9
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 2.9e-27 125.6 79 69.6
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 3.8e-27 125.2 79 68.4
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 6.5e-27 124.4 80 65.0
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 6.5e-27 124.4 80 65.0
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 8.5e-27 124.0 79 64.6
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.1e-26 123.6 79 65.8
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.1e-26 123.6 79 67.1
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.5e-26 123.2 80 68.8
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.9e-26 122.9 84 61.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.5e-26 122.5 84 63.1
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 3.2e-26 122.1 86 60.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 3.2e-26 122.1 87 62.1
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 5.5e-26 121.3 88 61.4
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 9.4e-26 120.6 79 64.6
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 9.4e-26 120.6 79 64.6
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.2e-25 120.2 83 61.4
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.2e-25 120.2 132 48.5
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 1.2e-25 120.2 87 62.1
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.7e-25 119.0 79 62.0
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 8.0e-25 117.5 80 62.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 4.0e-24 115.2 79 62.0
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 6.8e-24 114.4 89 55.1
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.8e-24 114.4 135 41.5
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.2e-23 113.6 79 62.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.2e-23 113.6 70 70.0
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 3.4e-23 112.1 79 59.5
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.4e-23 112.1 87 65.5
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 4.4e-23 111.7 78 56.4
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.7e-22 109.8 80 60.0
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.8e-22 109.0 79 62.0
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 2.8e-22 109.0 79 59.5
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 4.8e-22 108.2 76 59.2
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-21 107.1 80 60.0
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.1e-21 105.1 70 67.1
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 4.1e-21 105.1 127 46.5
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 5.4e-21 104.8 80 58.8
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.0e-21 104.4 65 70.8
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 7.0e-21 104.4 77 59.7
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.0e-21 104.4 130 46.9
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.0e-21 104.4 130 46.9
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 9.1e-21 104.0 90 52.2
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 9.1e-21 104.0 90 52.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 9.1e-21 104.0 76 56.6
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 4.5e-20 101.7 90 51.1
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 4.5e-20 101.7 108 46.3
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 5.9e-20 101.3 90 51.1
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 5.9e-20 101.3 86 52.3
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 7.7e-20 100.9 125 43.2
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.0e-19 100.5 108 45.4
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.9e-19 99.0 79 48.1
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 5.0e-19 98.2 64 65.6
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 6.6e-19 97.8 84 52.4
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 8.6e-19 97.4 63 65.1
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.5e-18 95.9 63 65.1
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 3.3e-18 95.5 60 68.3
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 7.2e-18 94.4 72 59.7
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 9.5e-18 94.0 57 71.9
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 9.5e-18 94.0 120 43.3
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 2.8e-17 92.4 62 59.7
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 4.7e-17 91.7 79 51.9
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 6.1e-17 91.3 87 48.3
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 8.0e-17 90.9 119 38.7
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.0e-15 86.3 63 57.1
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 9.8e-15 84.0 65 55.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.4e-13 80.1 82 40.2
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 3.2e-13 79.0 79 43.0
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.1e-13 78.6 62 54.8
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 7.0e-13 77.8 83 34.9
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 9.2e-13 77.4 72 41.7
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 5.9e-12 74.7 36 86.1
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.0e-11 73.9 83 39.8
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.9e-11 72.0 98 34.7
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.9e-11 72.0 98 34.7
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.1e-10 70.5 68 47.1
TAR593G0001 Trochodendron aralioides HOM05D000323 ORTHO05D000201 2.5e-10 69.3 38 94.7
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.8e-09 65.9 138 32.6
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 2.0e-07 59.7 39 66.7
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 3.4e-07 58.9 38 65.8
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 4.4e-07 58.5 37 64.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 5.8e-07 58.2 39 64.1
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.7e-06 56.6 39 64.1
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.2e-06 56.2 37 67.6
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.9e-06 55.8 39 61.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 3.7e-06 55.5 40 57.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 3.7e-06 55.5 97 33.0
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 3.7e-06 55.5 80 33.8
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 6.4e-06 54.7 47 53.2


User provided reference genes

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