Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 8.4e-63 243.4 116 100.0
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 8.5e-47 190.3 97 90.7
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 6.9e-41 170.6 94 84.0
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 5.9e-40 167.5 97 77.3
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.9e-39 165.2 92 80.4
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 4.2e-38 161.4 97 75.3
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 4.2e-38 161.4 92 78.3
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 1.2e-37 159.8 92 79.3
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 2.7e-37 158.7 94 77.7
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 4.7e-37 157.9 88 80.7
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 6.1e-37 157.5 88 79.5
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.4e-36 156.4 93 77.4
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 1.8e-36 156.0 94 76.6
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 1.8e-36 156.0 98 71.4
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 5.1e-36 154.5 96 72.9
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.1e-35 153.3 96 71.9
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 2.0e-35 152.5 93 76.3
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.6e-35 152.1 92 75.0
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 2.6e-35 152.1 92 75.0
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.3e-34 149.8 88 78.4
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 1.3e-34 149.8 98 68.4
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 1.7e-34 149.4 96 74.0
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 2.8e-34 148.7 92 75.0
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 4.8e-34 147.9 94 71.3
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 4.8e-34 147.9 90 74.4
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 6.3e-34 147.5 92 72.8
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.1e-33 146.7 97 70.1
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 1.1e-33 146.7 96 70.8
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 1.4e-33 146.4 97 70.1
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 1.4e-33 146.4 97 70.1
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 1.4e-33 146.4 97 67.0
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.4e-33 146.4 93 74.2
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.4e-33 146.4 93 74.2
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.4e-33 146.4 93 74.2
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 1.4e-33 146.4 90 74.4
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 1.8e-33 146.0 90 74.4
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 3.1e-33 145.2 87 75.9
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 3.1e-33 145.2 90 75.6
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.1e-33 145.2 95 76.8
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 7.0e-33 144.1 90 72.2
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 7.0e-33 144.1 90 73.3
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 7.0e-33 144.1 90 73.3
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 1.5e-32 142.9 132 56.1
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.0e-32 142.5 92 72.8
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.6e-32 142.1 90 73.3
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 2.6e-32 142.1 77 85.7
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 4.5e-32 141.4 92 72.8
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 7.7e-32 140.6 90 70.0
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 6.5e-31 137.5 90 67.8
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 1.1e-30 136.7 94 69.1
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.1e-30 136.7 97 66.0
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.5e-30 136.3 90 68.9
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 1.9e-30 136.0 92 68.5
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 1.9e-30 136.0 90 68.9
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 2.5e-30 135.6 92 68.5
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 3.2e-30 135.2 94 67.0
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 4.2e-30 134.8 91 69.2
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 5.5e-30 134.4 87 69.0
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 1.2e-29 133.3 93 68.8
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 1.6e-29 132.9 94 66.0
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 2.1e-29 132.5 87 71.3
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 67.8
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 67.8
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 67.8
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 67.8
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 67.8
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 3.6e-29 131.7 87 69.0
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 4.7e-29 131.3 87 69.0
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 8.0e-29 130.6 139 48.9
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 1.0e-28 130.2 92 65.2
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.0e-28 130.2 92 70.7
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.8e-28 129.4 92 64.1
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 3.9e-28 128.3 90 66.7
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 5.2e-28 127.9 92 64.1
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 2.6e-27 125.6 92 64.1
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 4.4e-27 124.8 94 61.7
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 5.7e-27 124.4 92 63.0
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 9.7e-27 123.6 93 68.8
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 1.7e-26 122.9 85 64.7
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 1.4e-25 119.8 101 59.4
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 4.1e-25 118.2 87 60.9
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 7.0e-25 117.5 90 65.6
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 1.2e-24 116.7 70 75.7
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.6e-24 116.3 71 76.1
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 2.0e-24 115.9 93 58.1
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 3.5e-24 115.2 90 62.2
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.0e-23 113.6 70 72.9
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 5.0e-23 111.3 95 64.2
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 6.5e-23 110.9 167 39.5
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 1.5e-22 109.8 92 59.8
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 2.5e-22 109.0 67 74.6
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 8.0e-21 104.0 50 88.0
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 6.8e-20 100.9 93 55.9
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 2.0e-19 99.4 63 69.8
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.8e-18 94.7 65 67.7
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 4.8e-18 94.7 60 73.3
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.8e-17 92.8 49 83.7
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 3.1e-17 92.0 49 77.6
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 5.3e-17 91.3 49 79.6
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 9.1e-17 90.5 64 68.8
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.2e-16 90.1 54 74.1
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 6.5e-15 84.3 66 63.6
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 2.7e-08 62.4 53 58.5
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 4.5e-08 61.6 42 66.7
Ca_08439_v3 Cicer arietinum L. HOM05D007428 ORTHO05D009308 1.0e-07 60.5 64 51.6
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 5.0e-07 58.2 39 71.8
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 5.0e-07 58.2 28 85.7


User provided reference genes

Program Settings