Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0186 Trochodendron aralioides HOM05D006373 ORTHO05D008145 4.9e-41 171.0 107 100.0
Nn6g34269 Nelumbo nucifera HOM05D006373 ORTHO05D008145 3.2e-24 115.2 107 63.6
Dinv32419 Davidia involucrata HOM05D006373 ORTHO05D008145 9.6e-21 103.6 109 59.6
MBI12_g11810_MAGBIO Magnolia biondii HOM05D006373 ORTHO05D008145 2.1e-20 102.4 110 58.2
Actinidia33446 Actinidia chinensis HOM05D006373 ORTHO05D008145 6.2e-20 100.9 106 56.6
QL08p050698 Quercus lobata HOM05D006373 ORTHO05D008145 1.4e-19 99.8 106 52.8
Ciclev10019320m.g Citrus clementina HOM05D006373 ORTHO05D008145 3.1e-19 98.6 107 54.2
vmacro20974 Vaccinium macrocarpon HOM05D006373 ORTHO05D008145 6.9e-19 97.4 106 56.6
Haze_15231 Corylus avellana HOM05D006373 ORTHO05D008145 2.0e-18 95.9 107 55.1
Aqoxy7G00462 Aquilegia oxysepala HOM05D006373 ORTHO05D008145 7.6e-18 94.0 109 53.2
CANSAT56G4468 Cannabis sativa HOM05D006373 ORTHO05D008145 9.9e-18 93.6 107 51.4
CSS0009190 Camellia sinensis var. sinensis HOM05D006373 ORTHO05D008145 2.9e-17 92.0 108 52.8
PGR042G0347 Punica granatum HOM05D006373 ORTHO05D008145 3.8e-17 91.7 107 50.5
CiPaw.02G024800 Carya illinoinensis HOM05D006373 ORTHO05D008145 4.9e-17 91.3 107 56.1
Rhsim01G0155400 Rhododendron simsii HOM05D006373 ORTHO05D008145 4.9e-17 91.3 106 53.8
Atru.chr5.401 Acer truncatum HOM05D006373 ORTHO05D008145 1.4e-16 89.7 105 51.4
GSVIVG01027599001 Vitis vinifera HOM05D006373 ORTHO05D008145 1.4e-16 89.7 105 52.4
Thecc.01G369000 Theobroma cacao HOM05D006373 ORTHO05D008145 3.2e-16 88.6 103 50.5
Eucgr.E00282 Eucalyptus grandis HOM05D006373 ORTHO05D008145 1.2e-15 86.7 106 50.9
Lj1g0016698 Lotus japonicus HOM05D006373 ORTHO05D008145 1.6e-15 86.3 107 50.5
RcHm_v2.0_Chr1g0352131 Rosa chinensis HOM05D006373 ORTHO05D008145 2.7e-15 85.5 108 50.9
TWI59G0120 Tripterygium wilfordii HOM05D006373 ORTHO05D008145 2.7e-15 85.5 105 49.5
Cc02_g37210 Coffea canephora HOM05D006373 ORTHO05D008145 4.6e-15 84.7 108 51.9
Duzib133G1433 Durio zibethinus HOM05D006373 ORTHO05D008145 4.6e-15 84.7 104 50.0
Cpa.g.sc57.89 Carica papaya HOM05D006373 ORTHO05D008145 6.0e-15 84.3 108 48.1
Hma1.2p1_0068F.1_g037130 Hydrangea macrophylla HOM05D006373 ORTHO05D008145 7.9e-15 84.0 106 51.9
MD07G1125800 Malus domestica HOM05D006373 ORTHO05D008145 1.0e-14 83.6 107 46.7
Cfa004178 Carpinus fangiana HOM05D006373 ORTHO05D008145 1.8e-14 82.8 99 51.5
Medtr7g076290 Medicago truncatula HOM05D006373 ORTHO05D008145 2.3e-14 82.4 108 45.4
arahy.Tifrunner.gnm1.ann1.TZ2CHG Arachis hypogaea HOM05D006373 ORTHO05D008145 3.9e-14 81.6 107 48.6
MSTRG.20789 Avicennia marina HOM05D006373 ORTHO05D008145 3.9e-14 81.6 106 50.9
arahy.Tifrunner.gnm1.ann1.V9KE7M Arachis hypogaea HOM05D006373 ORTHO05D008145 6.7e-14 80.9 107 47.7
FAN01G2011 Fragaria x ananassa HOM05D006373 ORTHO05D008145 8.7e-14 80.5 108 48.1
Gohir.D08G150600 Gossypium hirsutum HOM05D006373 ORTHO05D008145 8.7e-14 80.5 104 46.2
Lj7A521G13 Lonicera japonica HOM05D006373 ORTHO05D008145 8.7e-14 80.5 105 48.6
DCAR_025171 Daucus carota HOM05D006373 ORTHO05D008145 1.5e-13 79.7 108 48.1
Manes.01G262700 Manihot esculenta HOM05D006373 ORTHO05D008145 1.5e-13 79.7 106 48.1
Oeu059230.1 Olea europaea HOM05D006373 ORTHO05D008145 1.9e-13 79.3 108 49.1
Gorai.004G156300 Gossypium raimondii HOM05D006373 ORTHO05D008145 2.5e-13 79.0 104 45.2
SGA_v2.0_scaffold153G37065 Striga asiatica HOM05D006373 ORTHO05D008145 2.5e-13 79.0 105 47.6
FvH4_7g12990 Fragaria vesca HOM05D006373 ORTHO05D008145 4.3e-13 78.2 108 47.2
Gohir.A08G129300 Gossypium hirsutum HOM05D006373 ORTHO05D008145 4.3e-13 78.2 104 46.2
AUR62033368 Chenopodium quinoa HOM05D006373 ORTHO05D008145 5.6e-13 77.8 109 47.7
Sc23g0003310 Simmondsia chinensis HOM05D006373 ORTHO05D008145 5.6e-13 77.8 107 46.7
FAN06G0518 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.6e-12 76.3 108 46.3
FAN10G2811 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.6e-12 76.3 108 46.3
Glyma.09G264000 Glycine max HOM05D006373 ORTHO05D008145 2.1e-12 75.9 109 49.5
PSO478G1066 Papaver somniferum HOM05D006373 ORTHO05D008145 2.1e-12 75.9 111 46.8
FAN10G3773 Fragaria x ananassa HOM05D006373 ORTHO05D008145 3.7e-12 75.1 110 47.3
Psat3g112440 Pisum sativum HOM05D006373 ORTHO05D008145 3.7e-12 75.1 108 42.6
Prupe.2G154000 Prunus persica HOM05D006373 ORTHO05D008145 8.2e-12 73.9 114 48.2
PSO782G5614 Papaver somniferum HOM05D006373 ORTHO05D008145 1.1e-11 73.6 112 45.5
Ca_07867_v3 Cicer arietinum L. HOM05D006373 ORTHO05D008145 2.4e-11 72.4 108 42.6
Nitab4.5_0010430g0020 Nicotiana tabacum HOM05D006373 ORTHO05D008145 3.1e-11 72.0 105 48.6
Peaxi162Scf00021g00529 Petunia axillaris HOM05D006373 ORTHO05D008145 3.1e-11 72.0 106 50.0
THA.LOC104801460 Tarenaya hassleriana HOM05D006373 ORTHO05D008145 5.3e-11 71.2 103 44.7
CAN.G170.53 Capsicum annuum HOM05D006373 ORTHO05D008145 6.9e-11 70.9 107 49.5
SalBow3G0067 Salvia bowleyana HOM05D006373 ORTHO05D008145 9.0e-11 70.5 106 44.3
Sed0002578 Sechium edule HOM05D006373 ORTHO05D008145 9.0e-11 70.5 107 40.2
CsaV3_6G005860 Cucumis sativus L. HOM05D006373 ORTHO05D008145 2.0e-10 69.3 107 44.9
PGSC0003DMG400017049 Solanum tuberosum HOM05D006373 ORTHO05D008145 2.0e-10 69.3 107 47.7
Sabra14G0055000 Salix brachista HOM05D006373 ORTHO05D008145 5.8e-10 67.8 100 47.0
Solyc01g091820.3 Solanum lycopersicum HOM05D006373 ORTHO05D008145 5.8e-10 67.8 107 47.7
TPR.G37746 Trifolium pratense HOM05D006373 ORTHO05D008145 5.8e-10 67.8 109 41.3
COL.COLO4_06964 Corchorus olitorius HOM05D006373 ORTHO05D008145 1.0e-09 67.0 104 40.4
Sopen01g037590 Solanum pennellii HOM05D006373 ORTHO05D008145 1.0e-09 67.0 107 47.7
TPR.G33172 Trifolium pratense HOM05D006373 ORTHO05D008145 2.2e-09 65.9 109 39.4
HPP92_004956 Vanilla planifolia HOM05D006373 ORTHO05D008145 2.9e-09 65.5 107 43.9
FAN06G4951 Fragaria x ananassa HOM05D006373 ORTHO05D008145 3.8e-09 65.1 99 43.4
Lalb_Chr01g0021121 Lupinus albus HOM05D006373 ORTHO05D008145 3.8e-09 65.1 108 55.6
Nitab4.5_0004550g0010 Nicotiana tabacum HOM05D006373 ORTHO05D008145 4.9e-09 64.7 105 44.8
Hund27327 Selenicereus undatus HOM05D006373 ORTHO05D008145 4.9e-09 64.7 103 43.7
VMungo1383G2252 Vigna mungo HOM05D006373 ORTHO05D008145 6.5e-09 64.3 109 45.0
HanXRQChr03g0093561 Helianthus annuus HOM05D006373 ORTHO05D008145 1.4e-08 63.2 104 41.3
FAN03G2318 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.9e-08 62.8 99 44.4
Lsat_1_v5_gn_3_135660 Lactuca sativa HOM05D006373 ORTHO05D008145 9.3e-08 60.5 92 40.2
Glyma.18G228000 Glycine max HOM05D006373 ORTHO05D008145 1.2e-07 60.1 110 51.8
Carub.0001s0035 Capsella rubella HOM05D006373 ORTHO05D008145 2.1e-07 59.3 105 37.1
Os09g0521900 Oryza sativa ssp. japonica HOM05D006373 ORTHO05D008145 2.7e-07 58.9 107 38.3
Zm00001eb318880 Zea mays HOM05D006373 ORTHO05D008145 3.5e-07 58.5 113 38.1
Phvul.008G070200 Phaseolus vulgaris HOM05D006373 ORTHO05D008145 4.6e-07 58.2 109 40.4
ClCG06G000110 Citrullus lanatus HOM05D006373 ORTHO05D008145 7.9e-07 57.4 98 42.9
MELO3C022527.2 Cucumis melo HOM05D006373 ORTHO05D008145 7.9e-07 57.4 107 40.2
ECA240G2884 Erigeron canadensis HOM05D006373 ORTHO05D008145 1.8e-06 56.2 104 40.4
Thhalv10007143m.g Eutrema salsugineum HOM05D006373 ORTHO05D008145 1.8e-06 56.2 103 36.9
BraA09t42266Z Brassica rapa HOM05D006373 ORTHO05D008145 3.0e-06 55.5 103 38.8
Sp1g00420 Schrenkiella parvula HOM05D006373 ORTHO05D008145 8.7e-06 53.9 105 38.1


User provided reference genes

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