Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.6e-67 259.2 129 100.0
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.1e-54 215.7 115 97.4
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-50 202.6 116 91.4
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 6.5e-48 194.1 116 88.8
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 1.4e-45 186.4 116 84.5
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 3.0e-45 185.3 115 83.5
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 5.2e-45 184.5 116 83.6
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 5.2e-45 184.5 115 85.2
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.8e-45 183.7 115 85.2
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-44 183.3 116 83.6
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.2e-44 183.3 117 83.8
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 2.6e-44 182.2 115 83.5
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 3.3e-44 181.8 115 80.9
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 3.3e-44 181.8 117 82.1
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 3.3e-44 181.8 117 82.1
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.3e-44 181.8 115 84.3
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 4.4e-44 181.4 115 81.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.4e-44 181.4 116 82.8
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 5.7e-44 181.0 114 82.5
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 5.7e-44 181.0 116 82.8
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 7.5e-44 180.6 115 82.6
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 7.5e-44 180.6 116 85.3
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.3e-43 179.9 110 86.4
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.3e-43 179.9 115 83.5
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-43 179.1 115 80.9
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-43 179.1 115 80.9
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 2.2e-43 179.1 113 83.2
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.2e-43 179.1 116 81.0
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.2e-43 179.1 115 81.7
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 2.2e-43 179.1 115 81.7
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 2.8e-43 178.7 116 81.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 2.8e-43 178.7 116 83.6
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.8e-43 178.7 115 81.7
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.8e-43 178.7 116 82.8
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 3.7e-43 178.3 117 81.2
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.8e-43 177.9 115 80.0
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 6.3e-43 177.6 115 79.1
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 6.3e-43 177.6 115 79.1
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 8.2e-43 177.2 115 80.9
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.1e-42 176.8 115 80.0
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-42 176.4 115 79.1
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 2.4e-42 175.6 119 79.0
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 3.1e-42 175.3 117 80.3
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 4.1e-42 174.9 116 79.3
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 5.3e-42 174.5 115 80.0
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 5.3e-42 174.5 115 80.9
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 7.0e-42 174.1 116 80.2
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 7.0e-42 174.1 115 80.9
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 9.1e-42 173.7 115 80.0
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 9.1e-42 173.7 115 80.0
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.6e-41 172.9 117 80.3
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.6e-41 172.9 117 78.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-41 172.9 121 78.5
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.7e-41 172.2 117 81.2
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.7e-41 172.2 116 77.6
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.7e-41 172.2 115 79.1
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 3.5e-41 171.8 116 79.3
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 3.5e-41 171.8 118 82.2
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 3.5e-41 171.8 115 80.0
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.5e-41 171.8 115 79.1
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 4.5e-41 171.4 116 81.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 5.9e-41 171.0 116 78.4
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 7.7e-41 170.6 128 73.4
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 1.7e-40 169.5 111 80.2
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.7e-40 169.5 111 80.2
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-40 169.5 117 79.5
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 2.2e-40 169.1 117 78.6
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.2e-40 169.1 115 77.4
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 3.8e-40 168.3 116 80.2
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.0e-40 167.9 115 78.3
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 6.5e-40 167.5 111 78.4
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 8.5e-40 167.2 113 81.4
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 8.5e-40 167.2 111 78.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.5e-40 167.2 115 77.4
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.5e-40 167.2 116 77.6
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.5e-40 167.2 115 79.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 8.5e-40 167.2 118 76.3
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 8.5e-40 167.2 112 79.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 1.1e-39 166.8 115 77.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.1e-39 166.8 115 77.4
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.1e-39 166.8 116 77.6
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.1e-39 166.8 116 77.6
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.5e-39 166.4 111 77.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.5e-39 166.4 111 78.4
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.9e-39 166.0 112 79.5
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.9e-39 166.0 111 77.5
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.5e-39 165.6 113 82.3
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.5e-39 165.6 113 80.5
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 2.5e-39 165.6 115 78.3
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 2.5e-39 165.6 106 80.2
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.2e-39 165.2 111 77.5
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 3.2e-39 165.2 116 77.6
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 4.2e-39 164.9 116 80.2
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.2e-39 164.9 111 77.5
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 5.5e-39 164.5 116 75.0
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 5.5e-39 164.5 115 75.7
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.5e-39 164.5 151 63.6
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.2e-39 164.1 111 75.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 7.2e-39 164.1 111 77.5
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 7.2e-39 164.1 115 73.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.2e-38 163.3 111 75.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.1e-38 162.5 109 78.9
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.1e-38 162.5 105 81.0
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.7e-38 162.2 113 78.8
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.7e-38 162.2 110 79.1
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 3.6e-38 161.8 111 75.7
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 3.6e-38 161.8 118 75.4
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.7e-38 161.4 118 74.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 6.1e-38 161.0 116 75.9
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 8.0e-38 160.6 116 75.0
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.4e-37 159.8 115 73.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.4e-37 159.8 111 74.8
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.8e-37 159.5 119 73.1
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 8.8e-37 157.1 116 74.1
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-36 156.8 102 82.4
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 2.0e-36 156.0 152 61.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.6e-36 155.6 115 76.5
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.3e-35 153.3 115 71.3
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.8e-35 152.1 115 70.4
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.8e-35 152.1 115 74.8
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.7e-35 151.8 115 73.0
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 4.8e-35 151.4 113 72.6
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 8.3e-35 150.6 120 74.2
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-34 149.8 116 74.1
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-34 149.8 116 74.1
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-34 149.8 116 74.1
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-34 149.8 116 74.1
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 2.4e-34 149.1 115 70.4
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.4e-34 149.1 115 73.0
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.1e-34 148.3 115 74.8
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 4.1e-34 148.3 115 72.2
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 1.2e-33 146.7 110 73.6
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.0e-33 146.0 115 70.4
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.0e-33 146.0 116 72.4
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 3.5e-33 145.2 118 68.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.0e-32 143.7 111 72.1
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-32 143.7 116 71.6
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.3e-32 142.5 117 72.6
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.3e-32 142.5 117 70.9
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 2.9e-32 142.1 101 75.2
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 6.5e-32 141.0 116 69.8
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.5e-31 139.0 115 69.6
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 2.5e-31 139.0 114 70.2
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 5.5e-31 137.9 116 69.0
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-30 136.7 116 67.2
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.6e-30 135.2 93 81.7
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.7e-30 134.8 116 64.7
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.4e-29 133.3 81 81.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.3e-29 132.5 118 63.6
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 3.0e-29 132.1 119 64.7
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 5.2e-29 131.3 116 68.1
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 9.8e-28 127.1 116 66.4
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.7e-27 126.3 116 62.1
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.7e-27 126.3 86 77.9
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 2.2e-27 125.9 74 85.1
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 2.8e-27 125.6 91 74.7
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.3e-27 124.0 107 64.5
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.3e-27 124.0 107 64.5
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 4.1e-26 121.7 87 75.9
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 7.0e-26 120.9 118 61.0
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 5.0e-24 114.8 111 60.4
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 8.6e-24 114.0 115 59.1
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.5e-23 113.2 86 68.6
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-22 110.2 75 76.0
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 8.0e-22 107.5 79 72.2
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.0e-21 107.1 78 73.1
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 1.5e-20 103.2 64 79.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 9.8e-20 100.5 70 78.6
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-19 99.4 117 53.0
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-19 99.4 117 53.0
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 8.3e-19 97.4 80 68.8
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 5.9e-17 91.3 76 67.1
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.1e-15 87.0 81 63.0
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.8e-13 77.8 47 83.0
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.0e-12 76.3 115 45.2
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.0e-09 66.2 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 2.7e-09 65.9 78 56.4


User provided reference genes

Program Settings