Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.1e-110 403.3 193 100.0
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 1.7e-105 386.0 188 97.9
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 5.1e-105 384.4 190 96.8
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.1e-104 383.3 186 98.4
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.5e-104 382.9 190 96.3
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.5e-104 382.1 193 93.3
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.5e-104 382.1 193 93.3
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 4.3e-104 381.3 193 93.8
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 4.3e-104 381.3 186 98.4
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 4.3e-104 381.3 185 97.3
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 9.6e-104 380.2 193 92.7
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 9.6e-104 380.2 193 93.3
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 1.3e-103 379.8 186 96.8
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 1.3e-103 379.8 186 97.8
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 1.3e-103 379.8 185 96.8
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 1.3e-103 379.8 188 95.2
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 2.1e-103 379.0 186 97.3
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 2.1e-103 379.0 191 93.2
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 4.8e-103 377.9 186 95.2
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 4.8e-103 377.9 186 96.2
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.1e-102 376.7 189 93.1
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.1e-102 376.7 189 93.1
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 1.4e-102 376.3 186 94.6
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 1.4e-102 376.3 193 93.8
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.8e-102 375.9 186 95.2
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.8e-102 375.9 186 95.2
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 2.4e-102 375.6 193 93.3
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 2.4e-102 375.6 186 95.2
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 3.1e-102 375.2 185 95.1
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 3.1e-102 375.2 186 94.1
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 3.1e-102 375.2 185 95.1
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 3.1e-102 375.2 186 94.1
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 4.0e-102 374.8 193 91.2
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 5.3e-102 374.4 186 94.1
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 5.3e-102 374.4 188 92.6
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 6.9e-102 374.0 187 93.0
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 6.9e-102 374.0 193 93.3
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 6.9e-102 374.0 193 92.2
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 6.9e-102 374.0 186 93.5
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 9.0e-102 373.6 186 94.1
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 9.0e-102 373.6 186 94.1
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 9.0e-102 373.6 186 94.1
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 9.0e-102 373.6 186 93.0
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 1.2e-101 373.2 188 93.6
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 1.2e-101 373.2 186 94.1
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 1.2e-101 373.2 193 92.7
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 1.2e-101 373.2 193 92.7
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 1.2e-101 373.2 186 93.0
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 94.1
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 93.5
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 95.1
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 2.0e-101 372.5 186 94.1
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 2.0e-101 372.5 186 93.0
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 2.0e-101 372.5 186 94.1
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 2.0e-101 372.5 193 92.7
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.6e-101 372.1 186 93.0
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 2.6e-101 372.1 186 93.0
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 92.7
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 92.7
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 92.7
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 92.7
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 92.7
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 2.6e-101 372.1 186 94.1
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 2.6e-101 372.1 185 94.1
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 2.6e-101 372.1 193 90.7
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.4e-101 371.7 185 93.5
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 4.5e-101 371.3 186 93.5
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 5.8e-101 370.9 185 93.5
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 5.8e-101 370.9 193 91.7
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 5.8e-101 370.9 200 89.5
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 5.8e-101 370.9 185 94.1
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 5.8e-101 370.9 185 94.1
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 7.6e-101 370.5 186 94.1
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 9.9e-101 370.2 186 93.5
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 9.9e-101 370.2 193 91.7
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 9.9e-101 370.2 190 92.1
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 9.9e-101 370.2 189 91.5
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 93.5
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 93.0
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.3e-100 369.8 193 92.7
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 94.6
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 94.6
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 1.7e-100 369.4 182 94.5
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 1.7e-100 369.4 185 93.0
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.2e-100 369.0 187 93.6
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 2.9e-100 368.6 185 93.5
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 2.9e-100 368.6 193 91.7
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 2.9e-100 368.6 185 93.5
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 2.9e-100 368.6 185 94.1
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.8e-100 368.2 185 92.4
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 3.8e-100 368.2 185 93.0
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 6.4e-100 367.5 183 93.4
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 6.4e-100 367.5 193 92.2
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.4e-100 367.5 193 92.2
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 8.4e-100 367.1 189 90.5
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 1.1e-99 366.7 185 93.0
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 1.4e-99 366.3 188 91.5
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 1.4e-99 366.3 193 92.2
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 1.9e-99 365.9 183 94.5
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 3.2e-99 365.2 188 93.1
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 3.2e-99 365.2 193 90.2
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.2e-99 364.8 206 85.9
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 5.4e-99 364.4 186 92.5
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 5.4e-99 364.4 186 92.5
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 7.1e-99 364.0 186 91.4
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 7.1e-99 364.0 186 91.4
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 9.3e-99 363.6 186 90.9
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 9.3e-99 363.6 186 90.9
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 9.3e-99 363.6 186 90.9
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 90.9
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 2.1e-98 362.5 186 90.9
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 2.1e-98 362.5 186 90.9
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 2.7e-98 362.1 186 90.3
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 2.7e-98 362.1 186 90.9
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 3.5e-98 361.7 186 90.9
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 3.5e-98 361.7 186 90.9
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 6.0e-98 360.9 186 90.3
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 6.0e-98 360.9 186 90.3
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 7.9e-98 360.5 186 89.2
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 7.9e-98 360.5 186 90.9
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 7.9e-98 360.5 186 90.3
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 2.3e-97 359.0 186 90.3
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 2.3e-97 359.0 186 90.3
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 2.3e-97 359.0 186 90.3
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 3.9e-97 358.2 186 89.2
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 8.7e-97 357.1 193 89.1
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 7.4e-96 354.0 186 88.7
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 9.6e-96 353.6 182 89.0
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 1.3e-95 353.2 186 88.7
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 1.3e-95 353.2 186 88.7
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 1.8e-94 349.4 188 87.2
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 2.4e-94 349.0 184 88.0
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 6.9e-94 347.4 183 89.1
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 1.2e-93 346.7 181 89.5
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.2e-93 346.7 182 89.6
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 4.5e-93 344.7 259 69.1
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.3e-92 343.2 189 88.9
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 3.9e-89 331.6 183 82.0
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.1e-88 330.1 182 85.7
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 3.3e-88 328.6 191 82.2
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 4.8e-87 324.7 168 92.9
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.9e-83 312.8 188 80.3
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 2.7e-82 308.9 152 93.4
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 5.9e-77 291.2 143 93.7
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 9.4e-75 283.9 141 94.3
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 1.8e-73 279.6 139 92.1
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.1e-72 276.9 142 90.1
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 1.7e-71 273.1 130 95.4
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.6e-69 265.8 194 71.1
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 2.6e-69 265.8 164 82.3
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 2.5e-67 259.2 128 89.8
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 3.6e-66 255.4 188 71.3
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 3.0e-65 252.3 136 86.0
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 7.4e-64 247.7 148 81.1
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 5.5e-59 231.5 188 54.8
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 2.7e-58 229.2 189 56.1
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 2.4e-54 216.1 166 68.1
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 3.0e-49 199.1 157 66.9
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.5e-45 185.3 90 91.1
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.9e-44 182.6 115 74.8
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.5e-44 181.4 90 91.1
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 8.0e-42 174.5 87 88.5
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.0e-41 174.1 103 77.7
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.0e-41 172.6 87 87.4
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 5.2e-41 171.8 87 87.4
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.0e-40 169.9 87 87.4
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.4e-40 169.1 87 86.2
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.4e-40 169.1 87 86.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.4e-38 163.7 157 56.1
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.7e-37 157.9 87 83.9
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 5.5e-35 151.8 97 79.4
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 1.2e-34 150.6 96 79.2
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.1e-34 148.3 79 83.5
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 4.4e-32 142.1 69 84.1
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 8.3e-31 137.9 70 95.7
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.6e-27 125.2 62 85.5
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 9.8e-16 87.8 52 88.5
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 1.7e-15 87.0 44 90.9
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 2.7e-13 79.7 44 84.1


User provided reference genes

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