Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 2.0e-74 282.3 143 100.0
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 1.3e-20 103.6 55 92.7
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 1.3e-20 103.6 55 92.7
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.3e-20 103.6 55 92.7
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 1.7e-20 103.2 55 90.9
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.7e-20 103.2 67 77.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 2.9e-20 102.4 67 77.6
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 2.9e-20 102.4 55 90.9
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 2.9e-20 102.4 55 90.9
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 2.9e-20 102.4 55 90.9
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 2.9e-20 102.4 67 77.6
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 2.9e-20 102.4 67 77.6
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 2.9e-20 102.4 81 69.1
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.9e-20 102.4 55 90.9
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 3.7e-20 102.1 88 61.4
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 3.7e-20 102.1 68 79.4
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 3.7e-20 102.1 55 89.1
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 3.7e-20 102.1 67 76.1
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 4.9e-20 101.7 67 74.6
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 4.9e-20 101.7 67 74.6
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 4.9e-20 101.7 68 76.5
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 4.9e-20 101.7 68 76.5
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 4.9e-20 101.7 68 76.5
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 4.9e-20 101.7 73 71.2
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 4.9e-20 101.7 55 89.1
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 4.9e-20 101.7 68 75.0
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 6.4e-20 101.3 67 76.1
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 6.4e-20 101.3 67 79.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 8.3e-20 100.9 77 68.8
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 1.1e-19 100.5 85 61.2
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.4e-19 100.1 54 88.9
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.4e-19 100.1 85 62.4
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 1.4e-19 100.1 54 88.9
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.4e-19 100.1 67 76.1
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.9e-19 99.8 55 87.3
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 3.2e-19 99.0 54 87.0
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 3.2e-19 99.0 73 71.2
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 3.2e-19 99.0 68 72.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 3.2e-19 99.0 65 78.5
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 3.2e-19 99.0 65 75.4
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 4.1e-19 98.6 67 74.6
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 4.1e-19 98.6 73 69.9
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.1e-19 98.6 67 76.1
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 4.1e-19 98.6 55 85.5
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 5.4e-19 98.2 68 72.1
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 5.4e-19 98.2 85 61.2
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 5.4e-19 98.2 54 87.0
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 5.4e-19 98.2 67 74.6
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 7.0e-19 97.8 83 61.4
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 7.0e-19 97.8 67 71.6
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 9.2e-19 97.4 55 83.6
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 9.2e-19 97.4 65 75.4
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 1.2e-18 97.1 55 83.6
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 1.2e-18 97.1 55 83.6
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.6e-18 96.7 55 83.6
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 1.6e-18 96.7 73 68.5
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.6e-18 96.7 67 71.6
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 2.1e-18 96.3 71 69.0
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.1e-18 96.3 55 85.5
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 2.1e-18 96.3 55 85.5
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 2.1e-18 96.3 55 81.8
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 2.1e-18 96.3 55 85.5
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.1e-18 96.3 75 62.7
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 2.1e-18 96.3 55 85.5
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 2.7e-18 95.9 65 75.4
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 2.7e-18 95.9 84 60.7
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 3.5e-18 95.5 55 85.5
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 3.5e-18 95.5 67 70.1
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 4.6e-18 95.1 72 72.2
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 4.6e-18 95.1 55 87.3
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 4.6e-18 95.1 73 67.1
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 4.6e-18 95.1 55 83.6
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 4.6e-18 95.1 67 70.1
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 4.6e-18 95.1 67 70.1
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 6.0e-18 94.7 67 70.1
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 7.8e-18 94.4 54 85.2
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 1.0e-17 94.0 67 71.6
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.3e-17 93.6 58 77.6
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 2.3e-17 92.8 55 80.0
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.9e-17 92.0 55 80.0
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.9e-17 92.0 55 80.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 3.9e-17 92.0 71 66.2
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 5.0e-17 91.7 65 67.7
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 1.5e-16 90.1 55 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 9.5e-16 87.4 65 64.6
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.6e-15 86.7 76 57.9
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 2.1e-15 86.3 110 48.2
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 2.1e-15 86.3 66 65.2
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 2.8e-15 85.9 76 61.8
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 5.4e-11 71.6 62 62.9
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 3.5e-10 68.9 51 66.7
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 6.6e-09 64.7 41 73.2
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 5.6e-08 61.6 43 65.1
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 2.4e-06 56.2 59 44.1


User provided reference genes

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