Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 4.1e-306 1053.9 532 100.0
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 4.0e-144 515.8 483 59.4
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 2.2e-142 510.0 546 52.9
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 6.2e-137 491.9 547 53.4
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 3.4e-135 486.1 539 51.4
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 1.8e-131 473.8 537 53.4
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 6.7e-131 471.9 540 50.4
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 1.9e-130 470.3 542 51.7
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 5.3e-128 462.2 549 50.5
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.5e-127 460.7 544 51.1
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 5.8e-127 458.8 542 49.6
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 1.3e-126 457.6 543 49.4
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 3.8e-126 456.1 540 49.1
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 3.8e-126 456.1 544 49.1
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 7.9e-124 448.4 541 50.1
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.0e-123 448.0 503 51.7
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.3e-123 446.8 542 48.7
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 3.9e-123 446.0 551 49.9
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 4.3e-122 442.6 542 48.9
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.7e-121 439.5 544 49.6
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 1.8e-120 437.2 540 49.4
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 4.1e-120 436.0 542 48.5
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.1e-120 436.0 544 49.3
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.1e-120 436.0 544 49.3
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 2.0e-119 433.7 543 48.8
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 7.7e-119 431.8 544 50.6
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 2.5e-117 426.8 542 47.8
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 5.1e-115 419.1 543 47.7
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.1e-114 417.9 541 47.1
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.0e-114 417.2 537 48.6
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 5.7e-114 415.6 543 47.0
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 1.7e-113 414.1 543 46.8
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 2.8e-113 413.3 542 45.4
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 1.1e-112 411.4 545 47.7
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 3.1e-112 409.8 551 45.2
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 4.1e-112 409.5 543 46.6
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 5.3e-112 409.1 543 46.4
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 9.1e-112 408.3 551 45.0
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.4e-111 406.4 538 47.6
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 1.0e-110 404.8 545 46.1
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 7.2e-109 398.7 533 46.5
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 7.2e-109 398.7 518 49.2
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 1.2e-108 397.9 502 49.4
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.7e-108 396.7 538 47.0
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.1e-106 391.3 540 44.6
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 4.1e-104 382.9 545 47.3
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 9.1e-104 381.7 545 46.2
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 4.5e-103 379.4 551 45.0
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 3.8e-102 376.3 542 44.1
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 1.5e-101 374.4 551 44.1
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 9.4e-101 371.7 543 44.4
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 9.4e-101 371.7 540 43.1
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 1.2e-100 371.3 541 43.6
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 6.1e-100 369.0 541 44.5
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 1.4e-99 367.9 515 45.0
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 6.7e-99 365.5 546 42.3
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 8.8e-99 365.2 602 40.9
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 1.1e-98 364.8 537 43.8
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 1.1e-98 364.8 537 43.8
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 2.0e-98 364.0 541 44.0
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 9.7e-98 361.7 541 44.4
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 1.7e-97 360.9 541 43.4
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 2.2e-97 360.5 553 44.5
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 2.8e-97 360.1 512 43.4
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 1.4e-96 357.8 543 43.6
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 9.1e-96 355.1 546 42.1
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.6e-95 354.4 537 42.6
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 2.0e-95 354.0 539 42.3
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 1.0e-94 351.7 544 43.2
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.3e-94 351.3 541 41.4
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 1.7e-94 350.9 541 42.7
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 1.7e-94 350.9 545 41.7
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 2.9e-94 350.1 577 41.4
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 5.0e-94 349.4 545 42.9
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 5.0e-94 349.4 515 44.7
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 5.0e-94 349.4 538 42.4
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 6.5e-94 349.0 533 42.0
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 5.5e-93 345.9 539 43.6
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 5.5e-93 345.9 484 45.2
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 7.2e-93 345.5 553 41.4
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 3.6e-92 343.2 569 39.9
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 1.4e-91 341.3 540 44.3
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 6.8e-91 339.0 527 41.2
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 9.8e-90 335.1 541 39.9
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 1.7e-89 334.3 543 41.6
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 2.2e-89 334.0 542 40.8
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 4.8e-89 332.8 540 41.7
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 8.3e-89 332.0 531 41.2
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 5.9e-87 325.9 540 39.8
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 2.2e-86 323.9 543 41.3
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 2.9e-86 323.6 557 39.3
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 1.5e-85 321.2 487 42.9
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.5e-85 321.2 516 40.5
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 7.5e-82 308.9 543 40.1
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 1.3e-81 308.1 530 41.3
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 6.3e-81 305.8 541 39.6
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 1.4e-80 304.7 546 39.0
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.3e-78 298.1 513 39.4
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 1.5e-77 294.7 565 37.9
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 1.9e-77 294.3 567 38.1
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 3.3e-77 293.5 542 40.4
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 3.2e-72 276.9 537 37.6
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 4.1e-72 276.6 268 56.7
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 1.6e-71 274.6 411 42.6
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 9.5e-69 265.4 325 46.5
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 4.0e-67 260.0 264 53.4
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.5e-66 258.1 292 50.7
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 1.5e-66 258.1 268 53.7
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 6.4e-65 252.7 265 52.8
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 1.6e-63 248.1 570 34.6
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 6.0e-63 246.1 532 35.7
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 1.1e-61 241.9 633 32.4
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.2e-60 238.4 557 35.4
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 3.7e-57 226.9 555 35.7
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 1.9e-56 224.6 568 34.2
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 3.2e-56 223.8 251 47.4
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 7.1e-56 222.6 267 49.8
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 2.1e-55 221.1 307 45.0
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 7.6e-50 202.6 335 37.6
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 3.8e-49 200.3 176 63.6
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 1.9e-48 198.0 336 39.0
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 8.1e-44 182.6 540 30.7
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 3.4e-42 177.2 548 31.4
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 2.3e-38 164.5 315 38.1
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 2.2e-33 147.9 204 41.2
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 1.9e-24 118.2 370 30.8
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 7.6e-18 96.3 242 28.5
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 1.9e-13 81.6 207 31.4
GSVIVG01006141001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.4e-11 75.5 64 57.8
C04p07680 Brassica napus HOM05D004501 ORTHO05D023925 1.3e-06 58.9 117 40.2
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 3.0e-06 57.8 144 29.2


User provided reference genes

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