Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0906 Trochodendron aralioides HOM05D004403 ORTHO05D006164 5.3e-56 220.7 105 100.0
TAR375G0129 Trochodendron aralioides HOM05D004403 ORTHO05D006164 2.0e-18 95.9 56 82.1
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 2.6e-18 95.5 56 80.4
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 1.3e-17 93.2 55 81.8
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 1.7e-17 92.8 56 80.4
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 1.7e-17 92.8 56 78.6
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 2.2e-17 92.4 56 78.6
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 2.2e-17 92.4 56 78.6
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 2.2e-17 92.4 56 78.6
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 2.8e-17 92.0 57 80.7
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 3.7e-17 91.7 56 78.6
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 4.8e-17 91.3 56 78.6
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 8.3e-17 90.5 56 76.8
Dinv22934 Davidia involucrata HOM05D004403 ORTHO05D006164 1.4e-16 89.7 56 75.0
HPP92_003527 Vanilla planifolia HOM05D004403 ORTHO05D006164 1.4e-16 89.7 56 75.0
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 1.8e-16 89.4 56 76.8
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 1.8e-16 89.4 56 76.8
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 4.1e-16 88.2 56 78.6
CDE12G0834 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 5.4e-16 87.8 56 75.0
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 5.4e-16 87.8 56 73.2
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 7.0e-16 87.4 60 73.3
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 9.1e-16 87.0 56 75.0
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 9.1e-16 87.0 56 75.0
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 9.1e-16 87.0 56 73.2
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 1.2e-15 86.7 56 71.4
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 1.2e-15 86.7 56 69.6
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 1.2e-15 86.7 56 69.6
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 1.2e-15 86.7 56 73.2
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 1.6e-15 86.3 56 76.8
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.6e-15 86.3 56 75.0
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 1.6e-15 86.3 56 75.0
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 2.7e-15 85.5 56 71.4
COL.COLO4_14185 Corchorus olitorius HOM05D004403 ORTHO05D006164 2.7e-15 85.5 56 71.4
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 4.5e-15 84.7 56 67.9
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 7.7e-15 84.0 56 75.0
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 1.0e-14 83.6 56 75.0
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 1.0e-14 83.6 56 75.0
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.0e-14 83.6 56 75.0
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.3e-14 83.2 56 67.9
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 1.3e-14 83.2 56 66.1
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 1.3e-14 83.2 56 66.1
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 1.3e-14 83.2 56 73.2
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 1.7e-14 82.8 56 67.9
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 1.7e-14 82.8 60 70.0
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 2.2e-14 82.4 56 71.4
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 2.2e-14 82.4 56 73.2
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 2.2e-14 82.4 98 49.0
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 2.2e-14 82.4 98 49.0
Psat1g115160 Pisum sativum HOM05D004403 ORTHO05D006164 2.2e-14 82.4 56 73.2
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 2.2e-14 82.4 56 69.6
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 71.4
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 73.2
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 73.2
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 69.6
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 71.4
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 71.4
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 2.9e-14 82.0 56 69.6
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 5.0e-14 81.3 56 73.2
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 69.1
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 8.5e-14 80.5 55 72.7
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 1.1e-13 80.1 56 73.2
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 1.5e-13 79.7 56 71.4
ClCG09G013390 Citrullus lanatus HOM05D004403 ORTHO05D006164 1.5e-13 79.7 56 71.4
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.9e-13 79.3 56 71.4
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 1.9e-13 79.3 56 71.4
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 1.9e-13 79.3 56 71.4
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 1.9e-13 79.3 56 71.4
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 2.5e-13 79.0 56 71.4
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 3.2e-13 78.6 56 71.4
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 3.2e-13 78.6 56 64.3
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 4.2e-13 78.2 56 69.6
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 4.2e-13 78.2 56 69.6
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 5.5e-13 77.8 56 71.4
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 9.5e-13 77.0 56 67.9
TPR.G11029 Trifolium pratense HOM05D004403 ORTHO05D006164 9.5e-13 77.0 56 71.4
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 2.1e-12 75.9 56 64.3
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 4.7e-12 74.7 56 67.9
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 4.7e-12 74.7 41 82.9
SEGI_12165 Sequoiadendron giganteum HOM05D004403 ORTHO05D006164 8.0e-12 73.9 42 81.0
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.4e-11 73.2 47 68.1
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 5.2e-11 71.2 43 76.7
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 8.8e-11 70.5 47 68.1
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 1.2e-10 70.1 56 62.5
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 2.0e-10 69.3 45 66.7
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 2.6e-10 68.9 48 70.8
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 2.6e-10 68.9 48 70.8
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 2.6e-10 68.9 48 70.8
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 2.6e-10 68.9 48 70.8
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 2.6e-10 68.9 48 70.8
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 7.5e-10 67.4 43 69.8
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 9.8e-10 67.0 56 60.7
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 1.3e-09 66.6 48 66.7
MD07G1258300 Malus domestica HOM05D004403 ORTHO05D006164 2.2e-09 65.9 56 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 3.7e-09 65.1 47 66.0
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 3.7e-09 65.1 47 66.0
CARHR264440 Cardamine hirsuta HOM05D004403 ORTHO05D006164 4.9e-09 64.7 43 69.8
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 1.1e-08 63.5 43 67.4
DCAR_028870 Daucus carota HOM05D004403 ORTHO05D006164 4.1e-08 61.6 49 67.3
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 4.1e-08 61.6 41 68.3
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 7.0e-08 60.8 43 62.8


User provided reference genes

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