Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0786 Trochodendron aralioides HOM05D000459 ORTHO05D000798 9.2e-47 189.9 97 100.0
TAR374G0461 Trochodendron aralioides HOM05D000459 ORTHO05D000798 4.3e-12 74.7 54 74.1
TAR371G0295 Trochodendron aralioides HOM05D000459 ORTHO05D000798 2.8e-11 72.0 54 70.4
COL.COLO4_16590 Corchorus olitorius HOM05D000459 ORTHO05D000798 9.0e-10 67.0 54 64.8
Peaxi162Scf00937g00331 Petunia axillaris HOM05D000459 ORTHO05D000798 1.2e-09 66.6 55 61.8
Thecc.02G292700 Theobroma cacao HOM05D000459 ORTHO05D000798 1.2e-09 66.6 54 66.7
TAR629G2712 Trochodendron aralioides HOM05D000459 ORTHO05D000798 1.2e-09 66.6 54 68.5
Gohir.D01G140000 Gossypium hirsutum HOM05D000459 ORTHO05D000798 2.0e-09 65.9 54 64.8
Gorai.002G172200 Gossypium raimondii HOM05D000459 ORTHO05D000798 2.0e-09 65.9 54 64.8
Gohir.A01G146800 Gossypium hirsutum HOM05D000459 ORTHO05D000798 2.6e-09 65.5 54 63.0
Dinv10474 Davidia involucrata HOM05D000459 ORTHO05D000798 3.4e-09 65.1 55 63.6
Solyc04g008020.3 Solanum lycopersicum HOM05D000459 ORTHO05D000798 3.4e-09 65.1 54 61.1
Sopen04g003160 Solanum pennellii HOM05D000459 ORTHO05D000798 3.4e-09 65.1 54 61.1
PGSC0003DMG401029469 Solanum tuberosum HOM05D000459 ORTHO05D000798 3.4e-09 65.1 54 61.1
Gorai.005G157000 Gossypium raimondii HOM05D000459 ORTHO05D000798 4.5e-09 64.7 55 60.0
Gohir.D02G139800 Gossypium hirsutum HOM05D000459 ORTHO05D000798 7.6e-09 63.9 55 58.2
Hma1.2p1_0277F.1_g111680 Hydrangea macrophylla HOM05D000459 ORTHO05D000798 7.6e-09 63.9 54 63.0
Potri.010G106300 Populus trichocarpa HOM05D000459 ORTHO05D000798 7.6e-09 63.9 55 65.5
Eucgr.G02105 Eucalyptus grandis HOM05D000459 ORTHO05D000798 1.0e-08 63.5 54 64.8
Cfa015024 Carpinus fangiana HOM05D000459 ORTHO05D000798 1.7e-08 62.8 54 64.8
Haze_10878 Corylus avellana HOM05D000459 ORTHO05D000798 1.7e-08 62.8 54 64.8
Dinv07727 Davidia involucrata HOM05D000459 ORTHO05D000798 1.7e-08 62.8 54 61.1
Duzib248G0550 Durio zibethinus HOM05D000459 ORTHO05D000798 1.7e-08 62.8 54 61.1
Duzib251G0079 Durio zibethinus HOM05D000459 ORTHO05D000798 2.2e-08 62.4 54 61.1
Duzib268G0706 Durio zibethinus HOM05D000459 ORTHO05D000798 2.2e-08 62.4 54 61.1
MD16G1018400 Malus domestica HOM05D000459 ORTHO05D000798 2.2e-08 62.4 53 60.4
Prupe.1G333500 Prunus persica HOM05D000459 ORTHO05D000798 2.2e-08 62.4 53 58.5
PGR142G4413 Punica granatum HOM05D002001 ORTHO05D006833 2.2e-08 62.4 54 63.0
RcHm_v2.0_Chr4g0443041 Rosa chinensis HOM05D000459 ORTHO05D000798 2.2e-08 62.4 53 56.6
GSVIVG01011659001 Vitis vinifera HOM05D000459 ORTHO05D000798 2.2e-08 62.4 53 56.6
AUR62038475 Chenopodium quinoa HOM05D000459 ORTHO05D000798 2.9e-08 62.0 54 61.1
Ca_12541_v3 Cicer arietinum L. HOM05D000459 ORTHO05D000798 2.9e-08 62.0 54 61.1
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 2.9e-08 62.0 54 59.3
PGSC0003DMG402029469 Solanum tuberosum HOM05D000459 ORTHO05D000798 2.9e-08 62.0 51 60.8
Psat6g046440 Pisum sativum HOM05D000459 ORTHO05D000798 3.8e-08 61.6 55 60.0
QL03p035915 Quercus lobata HOM05D000459 ORTHO05D000798 6.5e-08 60.8 54 63.0
Sabra10G0077700 Salix brachista HOM05D000459 ORTHO05D000798 6.5e-08 60.8 54 61.1
SGA_v2.0_scaffold151G36777 Striga asiatica HOM05D000459 ORTHO05D000798 6.5e-08 60.8 54 57.4
TPR.G36911 Trifolium pratense HOM05D000459 ORTHO05D000798 6.5e-08 60.8 55 56.4
CiPaw.06G052100 Carya illinoinensis HOM05D000459 ORTHO05D000798 8.5e-08 60.5 54 59.3
Gohir.A03G115500 Gossypium hirsutum HOM05D000459 ORTHO05D000798 8.5e-08 60.5 55 56.4
vmacro10694 Vaccinium macrocarpon HOM05D000459 ORTHO05D000798 8.5e-08 60.5 54 59.3
arahy.Tifrunner.gnm1.ann1.MVKV3L Arachis hypogaea HOM05D000459 ORTHO05D000798 1.4e-07 59.7 55 54.5
AUR62014252 Chenopodium quinoa HOM05D000459 ORTHO05D000798 1.4e-07 59.7 80 45.0
Manes.15G134300 Manihot esculenta HOM05D000459 ORTHO05D000798 1.4e-07 59.7 54 59.3
VMungo1215G3294 Vigna mungo HOM05D000459 ORTHO05D000798 1.4e-07 59.7 54 59.3
Ciclev10015731m.g Citrus clementina HOM05D000459 ORTHO05D000798 1.9e-07 59.3 54 55.6
MD13G1020200 Malus domestica HOM05D000459 ORTHO05D000798 1.9e-07 59.3 53 60.4
Glyma.07G170200 Glycine max HOM05D000459 ORTHO05D000798 2.5e-07 58.9 54 59.3
Lj2g0019966 Lotus japonicus HOM05D000459 ORTHO05D000798 2.5e-07 58.9 54 61.1
MSTRG.2126 Avicennia marina HOM05D000459 ORTHO05D000798 3.2e-07 58.5 54 55.6
Manes.17G084001 Manihot esculenta HOM05D002001 ORTHO05D006833 3.2e-07 58.5 54 55.6
SGA_v2.0_scaffold23G10205 Striga asiatica HOM05D000459 ORTHO05D000798 3.2e-07 58.5 55 50.9
arahy.Tifrunner.gnm1.ann1.5LD4S6 Arachis hypogaea HOM05D000459 ORTHO05D000798 4.2e-07 58.2 54 55.6
Oeu031610.1 Olea europaea HOM05D000459 ORTHO05D000798 4.2e-07 58.2 54 55.6
Sabra08G0102900 Salix brachista HOM05D000459 ORTHO05D000798 4.2e-07 58.2 54 61.1
FvH4_4g33530 Fragaria vesca HOM05D000459 ORTHO05D000798 5.5e-07 57.8 53 54.7
FAN07G0922 Fragaria x ananassa HOM05D000459 ORTHO05D000798 5.5e-07 57.8 53 54.7
FAN12G4292 Fragaria x ananassa HOM05D000459 ORTHO05D000798 5.5e-07 57.8 53 54.7
FAN22G0958 Fragaria x ananassa HOM05D000459 ORTHO05D000798 5.5e-07 57.8 53 54.7
Glyma.02G085200 Glycine max HOM05D000459 ORTHO05D000798 5.5e-07 57.8 54 61.1
Medtr1g032440 Medicago truncatula HOM05D000459 ORTHO05D000798 5.5e-07 57.8 54 53.7
unitig_22.g5600 Utricularia gibba HOM05D000459 ORTHO05D000798 5.5e-07 57.8 57 50.9
Actinidia36626 Actinidia chinensis HOM05D000459 ORTHO05D000798 7.2e-07 57.4 54 55.6
EL10Ac6g14198 Beta vulgaris HOM05D000459 ORTHO05D000798 7.2e-07 57.4 54 55.6
CSS0034090 Camellia sinensis var. sinensis HOM05D000459 ORTHO05D000798 7.2e-07 57.4 57 56.1
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 7.2e-07 57.4 54 53.7
THA.LOC104809792 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 1.2e-06 56.6 54 57.4
Lalb_Chr09g0330871 Lupinus albus HOM05D000459 ORTHO05D000798 2.1e-06 55.8 54 51.9
Gohir.D05G309500 Gossypium hirsutum HOM05D000459 ORTHO05D000798 2.7e-06 55.5 55 56.4
Gorai.009G330000 Gossypium raimondii HOM05D000459 ORTHO05D000798 2.7e-06 55.5 55 56.4
Atru.chr11.921 Acer truncatum HOM05D000459 ORTHO05D000798 3.6e-06 55.1 54 55.6
Ah.02g128000 Amaranthus hybridus HOM05D000459 ORTHO05D000798 3.6e-06 55.1 54 53.7
CSS0023445 Camellia sinensis var. sinensis HOM05D000459 ORTHO05D000798 3.6e-06 55.1 55 58.2
CSS0037673 Camellia sinensis var. sinensis HOM05D000459 ORTHO05D000798 3.6e-06 55.1 55 58.2
CANSAT01G2064 Cannabis sativa HOM05D000459 ORTHO05D000798 3.6e-06 55.1 54 55.6
Gohir.A05G308800 Gossypium hirsutum HOM05D000459 ORTHO05D000798 3.6e-06 55.1 55 56.4
TWI74G1639 Tripterygium wilfordii HOM05D002001 ORTHO05D006833 3.6e-06 55.1 54 57.4
Potri.008G134900 Populus trichocarpa HOM05D000459 ORTHO05D000798 4.6e-06 54.7 54 55.6
Phvul.003G019100 Phaseolus vulgaris HOM05D000459 ORTHO05D000798 6.1e-06 54.3 54 55.6
Cpa.g.sc2.192 Carica papaya HOM05D000459 ORTHO05D000798 7.9e-06 53.9 54 55.6
Thhalv10018815m.g Eutrema salsugineum HOM05D000459 ORTHO05D000798 7.9e-06 53.9 54 51.9


User provided reference genes

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