Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 9.7e-52 206.5 99 100.0
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 9.4e-47 189.9 97 90.7
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 6.8e-45 183.7 99 88.9
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 2.8e-43 178.3 99 82.8
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 1.3e-40 169.5 92 84.8
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 1.7e-40 169.1 92 83.7
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 3.8e-40 167.9 99 81.8
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 5.0e-40 167.5 97 81.4
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 1.1e-39 166.4 92 83.7
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 5.5e-39 164.1 97 78.4
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.1e-38 162.2 93 81.7
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 4.7e-38 161.0 97 76.3
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 6.1e-38 160.6 96 77.1
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.4e-37 159.5 96 76.0
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 3.0e-37 158.3 94 79.8
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 3.0e-37 158.3 98 75.5
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 4.0e-37 157.9 99 74.7
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.2e-36 156.4 99 78.8
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.5e-36 156.0 99 73.7
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.0e-36 155.6 92 78.3
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 2.0e-36 155.6 92 78.3
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 2.6e-36 155.2 97 72.2
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 2.6e-36 155.2 99 73.7
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 2.6e-36 155.2 99 73.7
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 2.6e-36 155.2 92 78.3
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 4.4e-36 154.5 92 79.3
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 5.7e-36 154.1 92 77.2
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 7.5e-36 153.7 92 78.3
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 9.8e-36 153.3 96 74.0
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.3e-35 152.9 82 90.2
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 1.7e-35 152.5 96 76.0
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 1.7e-35 152.5 96 75.0
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.2e-35 152.1 98 73.5
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.2e-35 152.1 98 73.5
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.2e-35 152.1 98 73.5
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 3.7e-35 151.4 92 76.1
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 4.9e-35 151.0 135 58.5
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 4.9e-35 151.0 92 78.3
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 1.4e-34 149.4 96 70.8
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.4e-34 148.7 92 76.1
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 3.1e-34 148.3 92 75.0
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 5.4e-34 147.5 92 73.9
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 7.0e-34 147.1 87 77.0
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.2e-33 146.4 101 70.3
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 1.6e-33 146.0 99 71.7
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.6e-33 146.0 99 70.7
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 2.0e-33 145.6 100 74.0
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 2.7e-33 145.2 99 71.7
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 2.7e-33 145.2 87 75.9
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 2.7e-33 145.2 87 75.9
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 1.0e-32 143.3 100 72.0
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 1.3e-32 142.9 92 70.7
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 2.3e-32 142.1 96 71.9
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 3.8e-32 141.4 92 70.7
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 5.0e-32 141.0 92 70.7
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 8.6e-32 140.2 92 70.7
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.5e-31 139.4 100 72.0
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 1.5e-31 139.4 97 68.0
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 1.9e-31 139.0 95 68.4
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 1.9e-31 139.0 95 68.4
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 1.9e-31 139.0 95 68.4
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 3.3e-31 138.3 98 68.4
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 5.6e-31 137.5 92 69.6
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 5.6e-31 137.5 92 69.6
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 5.6e-31 137.5 94 70.2
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 7.3e-31 137.1 92 70.7
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 9.5e-31 136.7 97 67.0
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 1.2e-30 136.3 91 70.3
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 2.1e-30 135.6 97 66.0
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 2.1e-30 135.6 95 66.3
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 2.8e-30 135.2 97 66.0
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 6.1e-30 134.0 141 50.4
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.4e-29 132.9 90 70.0
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 2.3e-29 132.1 97 64.9
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 5.2e-29 131.0 97 63.9
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 8.9e-29 130.2 96 64.6
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 1.5e-28 129.4 90 67.8
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 3.7e-27 124.8 93 69.9
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 4.9e-27 124.4 103 62.1
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 5.4e-26 120.9 96 59.4
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 7.0e-26 120.6 92 67.4
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 7.0e-26 120.6 93 62.4
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 1.2e-25 119.8 70 78.6
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 1.6e-25 119.4 92 62.0
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.0e-25 119.0 84 67.9
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 1.0e-24 116.7 167 41.9
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.0e-24 116.7 70 75.7
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 6.6e-24 114.0 67 77.6
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 1.5e-23 112.8 95 65.3
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 9.5e-23 110.2 92 60.9
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 8.0e-22 107.1 63 77.8
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 6.8e-21 104.0 50 88.0
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 3.4e-20 101.7 93 57.0
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 3.7e-19 98.2 69 68.1
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 6.4e-19 97.4 65 72.3
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 1.9e-18 95.9 69 68.1
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.6e-17 92.8 49 83.7
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 2.7e-17 92.0 49 77.6
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 4.6e-17 91.3 49 79.6
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.0e-16 90.1 54 74.1
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 3.3e-15 85.1 66 66.7
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 3.2e-10 68.6 56 64.3
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 3.5e-09 65.1 44 70.5
Ca_08439_v3 Cicer arietinum L. HOM05D007428 ORTHO05D009308 3.0e-08 62.0 66 48.5
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 5.1e-08 61.2 44 70.5
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 4.3e-07 58.2 28 85.7


User provided reference genes

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