Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 0.0e+00 1224.5 623 100.0
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.3e-292 1008.4 630 82.2
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.1e-253 877.1 636 72.3
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.6e-243 845.5 637 70.8
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.4e-241 837.8 634 69.6
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 7.1e-233 810.8 563 74.8
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 4.2e-225 785.0 647 66.3
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 7.1e-225 784.3 634 66.9
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 5.1e-223 778.1 633 67.1
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.1e-222 776.9 649 65.2
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 4.9e-218 761.5 642 63.6
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 7.1e-217 757.7 626 66.0
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 5.1e-215 751.5 638 65.4
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 5.1e-215 751.5 640 64.4
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 1.9e-214 749.6 643 63.3
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 4.8e-213 745.0 640 63.0
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 9.0e-212 740.7 649 62.9
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.2e-211 740.3 644 64.1
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 2.0e-211 739.6 641 61.8
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 3.4e-211 738.8 638 64.9
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.7e-210 736.5 642 62.0
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.2e-210 736.1 641 62.4
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 3.8e-210 735.3 642 63.1
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 1.4e-209 733.4 625 64.3
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 4.2e-209 731.9 640 63.9
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 5.5e-209 731.5 640 63.1
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 7.2e-209 731.1 641 64.6
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 2.1e-208 729.6 636 64.3
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 8.7e-207 724.2 636 62.3
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-206 723.8 665 60.6
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.5e-206 723.4 640 61.7
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.9e-206 723.0 637 61.9
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 4.3e-206 721.8 658 61.9
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.7e-205 718.8 538 70.8
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.4e-204 716.8 636 61.6
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.1e-204 715.7 640 61.1
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 9.0e-204 714.1 667 60.0
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 2.6e-203 712.6 710 58.0
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.4e-201 706.8 640 60.5
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 1.9e-201 706.4 649 62.7
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 5.5e-201 704.9 654 60.1
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.1e-200 703.0 636 62.3
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 7.9e-200 701.0 631 61.8
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.0e-199 699.1 642 62.3
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 4.3e-198 695.3 621 61.0
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 6.3e-197 691.4 587 65.2
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 8.2e-197 691.0 644 61.0
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 3.1e-196 689.1 443 80.4
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 5.9e-195 684.9 648 61.4
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.9e-194 682.6 641 61.6
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 6.7e-191 671.4 643 57.7
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.2e-189 666.4 401 82.0
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-188 663.3 661 57.8
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-187 660.2 658 57.8
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 4.5e-187 658.7 396 82.6
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 2.2e-186 656.4 645 60.0
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.9e-185 653.3 611 60.4
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 2.1e-184 649.8 648 56.8
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 4.7e-184 648.7 648 56.8
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 6.1e-184 648.3 638 57.8
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 5.2e-183 645.2 632 59.0
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 2.6e-182 642.9 640 56.7
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 7.5e-182 641.3 639 59.3
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 2.8e-181 639.4 656 56.4
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 2.8e-181 639.4 653 56.7
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 1.0e-178 630.9 652 55.7
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 2.2e-178 629.8 662 55.3
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 7.2e-177 624.8 638 56.4
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.7e-176 622.1 571 61.8
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 2.6e-174 616.3 516 63.4
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 3.4e-174 615.9 570 61.8
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 4.4e-174 615.5 612 58.0
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.7e-171 606.3 572 60.8
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.7e-170 603.6 639 54.3
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.7e-170 603.6 669 53.8
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 6.5e-170 601.7 686 52.9
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 8.0e-168 594.7 680 52.4
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 2.3e-167 593.2 591 60.6
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 3.0e-167 592.8 419 72.1
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 1.2e-166 590.9 622 54.7
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 8.3e-165 584.7 639 52.6
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 3.3e-161 572.8 424 66.5
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 8.9e-159 564.7 464 65.3
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 9.8e-158 561.2 639 52.1
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 5.6e-153 545.4 626 53.8
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 2.1e-152 543.5 626 52.9
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 3.4e-150 536.2 497 59.0
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 7.0e-148 528.5 364 71.4
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-146 523.9 646 50.3
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 3.6e-144 516.2 643 49.6
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 9.8e-142 508.1 477 58.7
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 1.0e-138 498.0 602 49.8
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 2.3e-138 496.9 398 64.3
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 5.1e-138 495.7 496 51.8
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 6.6e-138 495.4 647 47.6
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 6.8e-135 485.3 412 61.9
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-133 480.7 482 56.4
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 4.7e-128 462.6 495 49.7
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 5.8e-126 455.7 290 78.3
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 1.7e-117 427.6 598 44.8
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.9e-116 424.1 774 39.8
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.0e-114 418.3 484 51.9
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.0e-114 418.3 354 63.0
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.8e-111 407.5 602 44.0
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-106 391.0 482 50.8
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.9e-105 387.5 555 47.0
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 4.3e-105 386.3 302 68.2
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.4e-103 381.3 438 52.3
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.6e-99 367.9 416 52.6
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 4.3e-97 359.8 339 55.5
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.3e-85 321.6 471 42.5
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.7e-85 321.2 197 81.7
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 4.2e-84 316.6 421 47.0
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 1.3e-80 305.1 425 46.4
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.1e-79 302.0 644 37.6
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 6.9e-79 299.3 211 69.2
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 9.1e-79 298.9 419 47.0
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 3.3e-73 280.4 171 79.5
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 7.4e-73 279.3 166 82.5
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.2e-70 271.9 575 38.6
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.0e-69 268.9 346 49.4
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 3.0e-66 257.3 188 72.3
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 4.0e-66 256.9 347 43.2
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 5.2e-66 256.5 166 74.1
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 1.2e-65 255.4 164 76.8
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.7e-56 224.9 179 61.5
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.0e-53 215.7 326 46.3
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 7.2e-52 209.5 124 80.6
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.2e-51 208.8 145 72.4
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.5e-46 190.3 142 70.4
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 3.3e-44 184.1 178 59.0
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 7.3e-44 183.0 384 34.1
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 6.1e-43 179.9 385 32.5
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.2e-41 175.6 145 63.4
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.0e-41 174.9 120 75.8
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.4e-41 173.7 132 70.5
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.3e-40 172.2 157 62.4
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 2.7e-38 164.5 303 39.3
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 5.2e-34 150.2 239 39.3
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 5.2e-34 150.2 239 39.3
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 2.6e-33 147.9 134 58.2
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.1e-31 142.5 269 40.9
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 3.0e-29 134.4 87 75.9
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 9.5e-28 129.4 322 28.3
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 5.2e-26 123.6 224 42.0
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 1.4e-23 115.5 69 78.3
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.9e-23 115.2 283 34.3
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 2.7e-22 111.3 95 65.3
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-21 107.5 92 57.6
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-21 107.5 92 57.6
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-21 107.5 92 57.6
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-21 107.5 92 57.6
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 6.6e-21 106.7 84 63.1
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-20 105.9 92 59.8
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 1.9e-20 105.1 69 68.1
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 7.3e-20 103.2 176 40.9
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-19 102.1 86 58.1
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 3.1e-18 97.8 110 57.3
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 3.1e-18 97.8 225 34.7
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.2e-16 91.7 54 81.5
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.0e-14 83.6 147 40.1
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.0e-13 81.3 49 85.7
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-12 79.3 70 55.7
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 1.5e-12 79.0 52 71.2
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.4e-10 71.6 81 48.1
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 3.1e-10 71.2 53 69.8
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.1e-10 71.2 168 36.9
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 2.0e-09 68.6 52 69.2
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 4.4e-09 67.4 40 82.5
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.3e-08 65.9 46 54.3
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.3e-08 65.9 46 54.3
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 2.9e-08 64.7 86 44.2
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 3.8e-08 64.3 46 52.2
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.4e-07 62.4 39 71.8
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 2.1e-06 58.5 52 61.5
Os03g0715332 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 3.5e-06 57.8 53 50.9


User provided reference genes

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