Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.3e-111 406.4 202 100.0
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 4.4e-51 205.3 122 82.0
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 4.6e-48 195.3 137 70.1
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 6.0e-48 194.9 122 80.3
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 3.3e-46 189.1 122 76.2
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 4.3e-46 188.7 122 75.4
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.6e-46 188.3 122 76.2
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.6e-45 186.8 122 77.0
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 2.8e-45 186.0 122 72.1
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 6.2e-45 184.9 122 75.4
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.1e-44 184.1 122 73.8
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 1.1e-44 184.1 122 74.6
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 1.4e-44 183.7 122 75.4
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 1.8e-44 183.3 122 73.0
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 2.4e-44 183.0 121 76.0
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 5.2e-44 181.8 122 74.6
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 5.2e-44 181.8 122 74.6
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 6.8e-44 181.4 122 70.5
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 6.8e-44 181.4 122 72.1
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 6.8e-44 181.4 121 73.6
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 2.0e-43 179.9 122 71.3
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.0e-43 179.9 122 71.3
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 2.0e-43 179.9 122 72.1
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 2.0e-43 179.9 122 70.5
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 2.6e-43 179.5 121 71.9
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 2.6e-43 179.5 122 72.1
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 3.4e-43 179.1 122 73.8
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 4.4e-43 178.7 122 72.1
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 5.8e-43 178.3 122 71.3
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 5.8e-43 178.3 122 71.3
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 7.6e-43 177.9 122 71.3
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 7.6e-43 177.9 122 72.1
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 9.9e-43 177.6 122 70.5
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 9.9e-43 177.6 122 70.5
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.3e-42 177.2 122 71.3
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.7e-42 176.8 122 70.5
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 1.7e-42 176.8 128 68.0
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 2.2e-42 176.4 129 70.5
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 2.2e-42 176.4 122 70.5
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 2.2e-42 176.4 128 69.5
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 2.2e-42 176.4 122 70.5
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 70.5
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 70.5
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 70.5
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 70.5
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 71.3
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 71.3
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 3.8e-42 175.6 122 70.5
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 4.9e-42 175.3 125 72.0
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 4.9e-42 175.3 127 68.5
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 6.4e-42 174.9 128 70.3
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 6.4e-42 174.9 120 70.8
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 8.4e-42 174.5 122 70.5
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 1.1e-41 174.1 122 68.0
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 1.1e-41 174.1 128 68.0
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.1e-41 174.1 122 69.7
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 1.1e-41 174.1 122 68.9
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.9e-41 173.3 122 69.7
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 1.9e-41 173.3 122 68.9
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 2.4e-41 172.9 122 68.0
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 2.4e-41 172.9 122 71.3
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 4.2e-41 172.2 122 69.7
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 4.2e-41 172.2 122 69.7
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 5.4e-41 171.8 122 68.9
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 5.4e-41 171.8 122 68.9
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.4e-41 171.8 122 69.7
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 7.1e-41 171.4 122 68.0
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 7.1e-41 171.4 122 69.7
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 7.1e-41 171.4 122 69.7
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 7.1e-41 171.4 122 68.0
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 7.1e-41 171.4 123 73.2
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 9.3e-41 171.0 122 67.2
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 1.2e-40 170.6 123 72.4
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.2e-40 170.6 123 72.4
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.2e-40 170.6 123 71.5
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.2e-40 170.6 123 72.4
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 1.6e-40 170.2 122 68.9
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.6e-40 170.2 121 70.2
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.1e-40 169.9 123 72.4
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 2.1e-40 169.9 122 68.9
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 2.1e-40 169.9 122 68.9
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 2.1e-40 169.9 122 69.7
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.7e-40 169.5 123 72.4
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 2.7e-40 169.5 122 69.7
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.7e-40 169.5 122 68.9
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 4.6e-40 168.7 122 72.1
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 4.6e-40 168.7 122 63.9
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 4.6e-40 168.7 122 69.7
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 4.6e-40 168.7 122 68.9
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 7.8e-40 167.9 122 68.9
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 7.8e-40 167.9 122 68.9
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 7.8e-40 167.9 122 68.9
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.0e-39 167.5 123 70.7
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.0e-39 167.5 122 71.3
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.0e-39 167.5 122 72.1
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 1.0e-39 167.5 123 69.1
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 1.0e-39 167.5 123 69.1
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 1.0e-39 167.5 122 68.0
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 1.0e-39 167.5 122 68.9
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 1.3e-39 167.2 122 67.2
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 1.7e-39 166.8 122 65.6
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 2.3e-39 166.4 122 65.6
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 3.0e-39 166.0 122 65.6
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 3.0e-39 166.0 122 68.0
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 5.1e-39 165.2 122 70.5
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 8.7e-39 164.5 122 63.9
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 2.5e-38 162.9 123 67.5
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 4.3e-38 162.2 133 62.4
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 4.3e-38 162.2 120 65.0
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 7.3e-38 161.4 125 69.6
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 7.3e-38 161.4 124 68.5
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 7.3e-38 161.4 125 68.0
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 9.6e-38 161.0 124 70.2
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 9.6e-38 161.0 124 69.4
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.3e-37 160.6 125 67.2
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 2.1e-37 159.8 124 70.2
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 2.1e-37 159.8 124 69.4
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.1e-37 159.8 129 64.3
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 3.6e-37 159.1 124 68.5
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 3.6e-37 159.1 122 67.2
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 4.8e-37 158.7 125 66.4
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.1e-36 157.5 124 68.5
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.1e-36 157.5 121 64.5
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 1.4e-36 157.1 102 72.5
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.8e-36 156.8 122 66.4
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.8e-36 156.8 122 66.4
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.8e-36 156.8 122 64.8
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 2.4e-36 156.4 122 60.7
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 3.1e-36 156.0 124 68.5
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 3.1e-36 156.0 125 65.6
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 6.9e-36 154.8 124 67.7
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 6.9e-36 154.8 125 64.0
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 6.9e-36 154.8 122 59.0
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 6.9e-36 154.8 122 59.0
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 6.9e-36 154.8 122 59.0
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.5e-35 153.7 122 68.9
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 5.8e-35 151.8 123 65.9
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 7.6e-35 151.4 122 67.2
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 9.9e-35 151.0 128 60.2
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.9e-34 149.4 103 71.8
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 9.3e-33 144.4 136 56.6
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 6.0e-32 141.7 122 61.5
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 7.8e-32 141.4 122 60.7
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 8.1e-29 131.3 123 59.3
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.0e-28 129.0 88 77.3
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 1.2e-27 127.5 144 50.0
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 2.6e-27 126.3 123 56.9
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 4.5e-27 125.6 122 54.1
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 3.2e-25 119.4 122 54.9
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 4.6e-24 115.5 123 48.8
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 1.9e-22 110.2 122 50.8
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 3.3e-22 109.4 120 52.5
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.4e-20 104.0 122 50.0
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 4.0e-20 102.4 121 45.5
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 4.0e-20 102.4 84 63.1
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 8.4e-18 94.7 76 61.8
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.6e-16 89.0 114 47.4
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.9e-16 88.2 112 47.3
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 1.0e-15 87.8 101 47.5
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 4.8e-13 79.0 57 64.9
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 3.1e-12 76.3 116 42.2
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 5.3e-12 75.5 121 43.0
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.2e-11 74.3 148 35.8
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 3.3e-06 56.2 131 31.3


User provided reference genes

Program Settings