Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 5.4e-278 960.3 463 100.0
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 3.3e-203 711.8 463 72.6
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 6.7e-196 687.6 465 70.3
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 8.0e-189 664.1 466 67.4
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 5.7e-187 657.9 466 66.3
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 4.2e-182 641.7 459 66.0
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 2.0e-179 632.9 465 63.9
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.6e-176 623.2 462 64.3
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 5.0e-175 618.2 467 63.6
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 5.0e-175 618.2 460 64.1
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 1.9e-174 616.3 467 63.6
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.8e-169 599.7 462 62.8
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 5.4e-169 598.2 458 63.8
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 7.0e-169 597.8 409 68.5
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 2.7e-168 595.9 543 55.1
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 3.9e-167 592.0 461 59.9
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 8.6e-167 590.9 461 59.9
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 4.7e-165 585.1 465 60.9
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 6.2e-165 584.7 465 60.0
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 2.3e-164 582.8 462 58.0
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.2e-163 580.5 463 60.0
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 1.7e-162 576.6 460 60.4
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 8.3e-162 574.3 463 59.6
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 3.2e-161 572.4 513 55.4
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 1.2e-160 570.5 474 58.2
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 1.6e-160 570.1 424 63.0
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 3.5e-160 568.9 464 58.8
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 3.5e-160 568.9 461 58.1
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 3.0e-159 565.8 460 58.3
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 3.9e-159 565.5 461 57.9
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.2e-157 560.5 461 58.8
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 3.6e-157 558.9 461 58.6
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 4.7e-157 558.5 452 58.8
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 1.8e-156 556.6 463 58.1
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 5.8e-155 551.6 457 59.3
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 6.4e-154 548.1 458 57.6
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 1.6e-152 543.5 463 57.5
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 3.9e-151 538.9 463 56.4
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 1.1e-150 537.3 464 57.1
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.9e-150 536.6 440 58.9
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 7.3e-150 534.6 457 54.9
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 9.5e-150 534.3 464 55.8
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 1.8e-148 530.0 463 55.9
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 8.9e-148 527.7 480 55.8
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 2.2e-146 523.1 456 55.0
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 3.5e-144 515.8 464 53.7
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 9.6e-142 507.7 380 65.8
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 8.9e-140 501.1 465 54.2
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.2e-139 500.7 458 53.9
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 1.3e-138 497.3 461 54.2
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 1.0e-135 487.6 471 53.3
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 1.9e-134 483.4 526 50.6
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 5.6e-134 481.9 468 53.4
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 7.1e-129 464.9 391 56.8
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 1.9e-126 456.8 375 58.7
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 2.1e-125 453.4 460 50.0
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 3.1e-124 449.5 465 48.4
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.3e-122 444.1 460 49.3
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.7e-122 443.7 460 49.3
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.9e-122 443.0 460 49.3
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.4e-121 440.7 461 47.7
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 5.5e-121 438.7 416 51.4
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 6.0e-120 435.3 459 50.3
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 2.3e-119 433.3 470 48.5
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.3e-119 433.3 459 50.3
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.8e-117 426.4 480 48.1
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 4.8e-117 425.6 453 49.2
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 1.1e-116 424.5 483 46.4
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 7.6e-115 418.3 470 46.4
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 8.4e-114 414.8 463 46.4
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 1.9e-113 413.7 466 46.6
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 5.5e-113 412.1 463 45.6
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 7.1e-113 411.8 384 55.5
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.6e-112 409.1 466 46.6
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 6.0e-112 408.7 441 50.1
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 3.0e-111 406.4 379 52.8
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 1.5e-110 404.1 462 44.8
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 1.9e-110 403.7 454 48.2
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 5.7e-110 402.1 466 46.6
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 3.7e-109 399.4 462 44.4
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.4e-108 397.5 467 45.2
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 6.9e-108 395.2 451 46.1
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 2.0e-107 393.7 454 47.1
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 3.4e-107 392.9 462 43.9
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 4.5e-107 392.5 266 68.8
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 5.9e-107 392.1 501 42.9
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 1.0e-106 391.3 458 48.9
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 5.5e-105 385.6 457 45.7
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 6.1e-104 382.1 458 45.9
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.1e-104 382.1 494 41.9
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 6.1e-104 382.1 463 44.1
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 1.3e-103 380.9 454 44.1
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 2.2e-101 373.6 386 49.7
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.5e-99 367.5 460 43.0
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 1.0e-98 364.8 462 43.5
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 3.8e-98 362.8 459 43.1
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 4.2e-97 359.4 454 41.6
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 4.2e-97 359.4 460 42.6
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 7.2e-97 358.6 468 43.8
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 9.4e-97 358.2 307 57.0
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 2.1e-96 357.1 461 43.2
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 2.1e-96 357.1 472 41.1
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 2.1e-96 357.1 472 41.1
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 2.1e-96 357.1 460 43.5
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 1.1e-94 351.3 433 43.4
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 2.6e-94 350.1 463 42.3
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 2.6e-94 350.1 470 41.7
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 4.4e-94 349.4 461 42.5
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 4.4e-94 349.4 460 42.0
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 7.4e-94 348.6 457 42.5
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.4e-92 344.4 475 41.1
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 2.4e-92 343.6 479 40.9
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 2.6e-91 340.1 466 41.2
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 4.5e-91 339.3 460 41.1
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 5.9e-91 339.0 330 53.6
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.0e-90 338.2 472 40.0
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 3.2e-89 333.2 333 50.2
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 2.1e-88 330.5 460 39.8
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 4.7e-88 329.3 475 40.6
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 6.7e-87 325.5 312 51.3
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 7.0e-84 315.5 488 37.7
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 5.0e-82 309.3 462 40.9
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 8.5e-82 308.5 496 35.7
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 5.5e-81 305.8 379 42.2
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 2.1e-80 303.9 489 36.2
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 2.7e-80 303.5 462 39.4
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 2.7e-80 303.5 462 39.4
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 4.7e-80 302.8 459 40.7
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 6.1e-80 302.4 462 38.7
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 1.4e-79 301.2 459 40.3
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 2.3e-79 300.4 490 37.3
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 5.2e-79 299.3 257 57.6
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 4.8e-77 292.7 462 39.2
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.1e-76 290.0 314 47.1
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 4.1e-76 289.7 260 56.2
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 4.5e-75 286.2 296 49.3
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.7e-74 284.3 300 48.3
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 2.9e-74 283.5 466 37.8
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 3.6e-72 276.6 426 39.2
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 1.4e-68 264.6 432 35.9
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 4.1e-68 263.1 501 35.5
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 2.3e-58 230.7 286 42.0
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 5.7e-54 216.1 356 36.8
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 4.9e-53 213.0 292 43.2
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 6.4e-53 212.6 196 54.6
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 9.5e-49 198.7 137 67.9
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.4e-47 194.9 296 38.2
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 8.3e-45 185.7 150 59.3
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 4.1e-44 183.3 155 58.7
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 6.8e-39 166.0 201 46.3
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 3.6e-32 143.7 424 27.4
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.2e-30 138.7 197 39.1
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 1.0e-26 125.6 307 28.0
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 1.7e-26 124.8 88 65.9
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 2.7e-19 100.9 120 45.0
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 7.8e-19 99.4 142 42.3
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 5.1e-18 96.7 132 40.9
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 5.8e-14 83.2 110 43.6
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 9.9e-14 82.4 83 42.2
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 9.9e-14 82.4 65 61.5
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 3.8e-13 80.5 61 55.7
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 3.8e-13 80.5 61 60.7
MCO05G023 Micromonas commoda HOM05D004162 ORTHO05D004543 5.4e-12 76.6 417 23.7
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 7.1e-12 76.3 82 47.6
VMungo0464G1157 Vigna mungo HOM05D004162 ORTHO05D004543 5.1e-10 70.1 96 42.7
SHI19079 Sapria himalayana HOM05D004162 ORTHO05D004543 6.7e-10 69.7 70 47.1
VMungo0464G1805 Vigna mungo HOM05D004162 ORTHO05D004543 4.3e-09 67.0 99 41.4
Cpa.g.sc10.94 Carica papaya HOM05D004162 ORTHO05D004543 1.4e-07 62.0 38 71.1


User provided reference genes

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