Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 2.6e-46 188.3 94 100.0
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.1e-41 172.9 94 89.4
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 2.4e-39 165.2 93 87.1
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.4e-38 161.4 94 83.0
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.9e-37 158.3 91 83.5
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.6e-35 151.0 95 78.9
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 1.3e-34 149.4 89 82.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 3.9e-34 147.9 92 78.3
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 3.9e-34 147.9 92 78.3
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 6.7e-34 147.1 100 78.0
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.1e-33 146.4 91 79.1
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.9e-33 145.6 92 77.2
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 2.5e-33 145.2 92 79.3
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 4.3e-33 144.4 93 80.6
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 5.6e-33 144.1 92 76.1
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 5.6e-33 144.1 92 76.1
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 7.4e-33 143.7 90 77.8
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 7.4e-33 143.7 90 77.8
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 7.4e-33 143.7 92 75.0
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 7.4e-33 143.7 92 75.0
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 7.4e-33 143.7 92 75.0
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 7.4e-33 143.7 92 77.2
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 9.6e-33 143.3 92 76.1
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 9.6e-33 143.3 90 77.8
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 9.6e-33 143.3 93 77.4
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 9.6e-33 143.3 92 76.1
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 9.6e-33 143.3 91 79.1
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 2.1e-32 142.1 91 80.2
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 2.8e-32 141.7 93 76.3
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.8e-32 141.7 92 76.1
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 4.8e-32 141.0 92 76.1
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 6.2e-32 140.6 93 73.1
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-31 139.4 92 77.2
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-31 139.4 92 77.2
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 1.4e-31 139.4 92 72.8
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 1.4e-31 139.4 91 73.6
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 1.4e-31 139.4 92 75.0
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 1.4e-31 139.4 91 76.9
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 1.8e-31 139.0 89 77.5
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.8e-31 139.0 92 75.0
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 2.4e-31 138.7 90 77.8
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 75.0
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 73.9
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 75.0
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 4.0e-31 137.9 92 73.9
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 4.0e-31 137.9 92 75.0
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 5.3e-31 137.5 91 76.9
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 5.3e-31 137.5 92 72.8
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 5.3e-31 137.5 92 73.9
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 6.9e-31 137.1 91 76.9
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 9.0e-31 136.7 86 75.6
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 9.0e-31 136.7 91 78.0
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 9.0e-31 136.7 90 74.4
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.2e-30 136.3 91 76.9
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.2e-30 136.3 95 71.6
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 1.2e-30 136.3 92 75.0
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.2e-30 136.3 94 71.3
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.5e-30 136.0 86 74.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.5e-30 136.0 92 72.8
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.5e-30 136.0 90 72.2
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.5e-30 136.0 90 72.2
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.5e-30 136.0 90 74.4
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 1.5e-30 136.0 90 72.2
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.5e-30 136.0 86 77.9
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.0e-30 135.6 90 73.3
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.0e-30 135.6 86 74.4
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 73.9
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 2.6e-30 135.2 91 74.7
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.6e-30 135.2 86 75.6
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.4e-30 134.8 90 73.3
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.4e-30 134.8 90 73.3
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 3.4e-30 134.8 92 72.8
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 4.5e-30 134.4 91 75.8
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 4.5e-30 134.4 90 73.3
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 9.9e-30 133.3 86 74.4
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.3e-29 132.9 86 73.3
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.3e-29 132.9 92 69.6
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.7e-29 132.5 92 70.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.7e-29 132.5 92 72.8
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.2e-29 132.1 90 72.2
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.2e-29 132.1 79 78.5
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 2.9e-29 131.7 92 68.5
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.9e-29 131.7 92 68.5
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 2.9e-29 131.7 92 71.7
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.8e-29 131.3 86 72.1
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 4.9e-29 131.0 91 71.4
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 6.4e-29 130.6 93 67.7
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 8.4e-29 130.2 90 73.3
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.1e-28 129.8 86 74.4
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.4e-28 129.4 86 73.3
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.9e-28 129.0 91 72.5
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 1.9e-28 129.0 92 68.5
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.5e-28 128.6 93 69.9
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.5e-28 128.6 91 70.3
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 2.5e-28 128.6 94 66.0
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 3.2e-28 128.3 92 69.6
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 3.2e-28 128.3 80 73.8
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.2e-28 128.3 91 70.3
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 4.2e-28 127.9 90 72.2
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 4.2e-28 127.9 90 72.2
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 4.2e-28 127.9 94 70.2
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 5.5e-28 127.5 91 71.4
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 7.1e-28 127.1 86 72.1
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 7.1e-28 127.1 86 72.1
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 7.1e-28 127.1 95 69.5
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 7.1e-28 127.1 85 67.1
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 7.1e-28 127.1 86 72.1
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 9.3e-28 126.7 91 70.3
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 9.3e-28 126.7 91 71.4
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 9.3e-28 126.7 92 70.7
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 9.3e-28 126.7 94 64.9
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 9.3e-28 126.7 94 67.0
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.2e-27 126.3 87 70.1
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.2e-27 126.3 90 70.0
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.2e-27 126.3 93 66.7
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 6.0e-27 124.0 79 75.9
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 6.0e-27 124.0 91 67.0
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.0e-26 123.2 91 68.1
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.3e-26 122.9 91 70.3
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.3e-26 122.9 86 68.6
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.3e-26 122.9 91 70.3
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 1.3e-26 122.9 91 67.0
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 3.0e-26 121.7 85 68.2
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 3.9e-26 121.3 85 68.2
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 3.9e-26 121.3 85 68.2
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 5.1e-26 120.9 84 73.8
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 5.1e-26 120.9 92 67.4
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 5.1e-26 120.9 92 67.4
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 6.7e-26 120.6 86 67.4
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 6.7e-26 120.6 86 66.3
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 6.7e-26 120.6 81 71.6
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 6.7e-26 120.6 101 66.3
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 8.7e-26 120.2 86 66.3
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 8.7e-26 120.2 91 68.1
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 8.7e-26 120.2 86 68.6
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 1.5e-25 119.4 92 63.0
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 2.5e-25 118.6 80 70.0
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 3.3e-25 118.2 85 67.1
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 3.3e-25 118.2 85 67.1
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.3e-25 118.2 91 69.2
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 4.3e-25 117.9 91 67.0
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 4.3e-25 117.9 88 64.8
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 4.3e-25 117.9 79 69.6
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 5.6e-25 117.5 90 66.7
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 5.6e-25 117.5 79 69.6
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 1.3e-24 116.3 92 59.8
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.8e-24 115.2 91 67.0
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 4.8e-24 114.4 91 64.8
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.8e-24 114.4 79 63.3
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 8.2e-24 113.6 80 70.0
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 1.2e-22 109.8 92 60.9
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.6e-22 108.6 69 69.6
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 5.8e-22 107.5 82 68.3
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.0e-21 106.7 78 67.9
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.0e-21 106.7 74 64.9
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.4e-20 102.8 96 60.4
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.6e-19 99.4 79 63.3
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 3.9e-18 94.7 96 51.0
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 1.1e-17 93.2 65 69.2
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 5.7e-17 90.9 97 50.5
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.3e-16 89.7 66 63.6
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 8.2e-16 87.0 72 68.1
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.4e-15 86.3 52 84.6
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 2.4e-15 85.5 72 61.1
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.0e-13 80.1 61 59.0
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 1.3e-13 79.7 76 47.4
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 2.5e-12 75.5 71 49.3
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 4.2e-12 74.7 94 41.5
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 6.7e-10 67.4 73 38.4
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 2.5e-09 65.5 40 70.0
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.1e-07 60.1 73 35.6
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.6e-06 55.5 69 39.1
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 3.4e-06 55.1 47 57.4
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 7.7e-06 53.9 69 36.2


User provided reference genes

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