Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0487 Trochodendron aralioides HOM05D000041 ORTHO05D006140 3.4e-55 218.0 105 100.0
TAR629G1015 Trochodendron aralioides HOM05D000041 ORTHO05D006140 1.3e-38 162.9 97 78.4
Aqoxy3G03493 Aquilegia oxysepala HOM05D000041 ORTHO05D006140 4.5e-31 137.9 94 68.1
CiPaw.11G047400 Carya illinoinensis HOM05D000041 ORTHO05D006140 7.2e-29 130.6 103 64.1
Ah.02g113790 Amaranthus hybridus HOM05D000041 ORTHO05D006140 2.1e-28 129.0 95 66.3
Sed0001387 Sechium edule HOM05D000041 ORTHO05D006140 2.1e-28 129.0 95 63.2
Actinidia04865 Actinidia chinensis HOM05D000041 ORTHO05D006140 2.7e-28 128.6 98 65.3
ATR0730G006 Amborella trichopoda HOM05D000041 ORTHO05D006140 3.6e-28 128.3 98 59.2
AUR62008466 Chenopodium quinoa HOM05D000041 ORTHO05D006140 4.7e-28 127.9 95 66.3
PSO017G0721 Papaver somniferum HOM05D000041 ORTHO05D006140 6.1e-28 127.5 97 66.0
AUR62021627 Chenopodium quinoa HOM05D000041 ORTHO05D006140 8.0e-28 127.1 95 66.3
Cc04_g14400 Coffea canephora HOM05D000041 ORTHO05D006140 8.0e-28 127.1 97 67.0
Dinv10659 Davidia involucrata HOM05D000041 ORTHO05D006140 1.8e-27 125.9 97 64.9
Lj1g0011184 Lotus japonicus HOM05D000041 ORTHO05D006140 1.8e-27 125.9 96 63.5
CDE04G1628 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 4.0e-27 124.8 97 60.8
Medtr3g037230 Medicago truncatula HOM05D000041 ORTHO05D006140 4.0e-27 124.8 97 64.9
QL10p017885 Quercus lobata HOM05D000041 ORTHO05D006140 6.7e-27 124.0 97 66.0
Hund11349 Selenicereus undatus HOM05D000041 ORTHO05D006140 6.7e-27 124.0 98 63.3
HPP92_021256 Vanilla planifolia HOM05D000041 ORTHO05D006140 6.7e-27 124.0 97 58.8
Rhsim08G0152000 Rhododendron simsii HOM05D000041 ORTHO05D006140 1.1e-26 123.2 98 62.2
PSO478G5294 Papaver somniferum HOM05D000041 ORTHO05D000061 1.5e-26 122.9 97 63.9
Prupe.5G198700 Prunus persica HOM05D000041 ORTHO05D006140 2.0e-26 122.5 97 59.8
EL10Ac5g11065 Beta vulgaris HOM05D000041 ORTHO05D006140 2.6e-26 122.1 95 63.2
GSVIVG01007961001 Vitis vinifera HOM05D000041 ORTHO05D006140 3.3e-26 121.7 97 62.9
CsaV3_1G002560 Cucumis sativus L. HOM05D000041 ORTHO05D006140 4.4e-26 121.3 96 58.3
MELO3C017192.2 Cucumis melo HOM05D000041 ORTHO05D006140 7.5e-26 120.6 96 59.4
FvH4_5g14510 Fragaria vesca HOM05D000041 ORTHO05D006140 7.5e-26 120.6 98 60.2
Dinv38747 Davidia involucrata HOM05D000041 ORTHO05D006140 9.7e-26 120.2 97 63.9
Psat5g199640 Pisum sativum HOM05D000041 ORTHO05D006140 9.7e-26 120.2 97 63.9
Zm00001eb020460 Zea mays HOM05D000041 ORTHO05D006140 1.3e-25 119.8 97 57.7
CSS0043787 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 1.7e-25 119.4 98 60.2
TPR.G12274 Trifolium pratense HOM05D000041 ORTHO05D006140 1.7e-25 119.4 97 61.9
FAN18G2506 Fragaria x ananassa HOM05D000041 ORTHO05D006140 2.8e-25 118.6 95 61.1
Ca_14694_v3 Cicer arietinum L. HOM05D000041 ORTHO05D006140 3.7e-25 118.2 95 63.2
RcHm_v2.0_Chr7g0182141 Rosa chinensis HOM05D000041 ORTHO05D006140 3.7e-25 118.2 98 59.2
ClCG06G016000 Citrullus lanatus HOM05D000041 ORTHO05D006140 4.8e-25 117.9 102 57.8
Lsat_1_v5_gn_1_14381 Lactuca sativa HOM05D000041 ORTHO05D006140 6.3e-25 117.5 97 60.8
Eucgr.B00542 Eucalyptus grandis HOM05D000041 ORTHO05D006140 1.1e-24 116.7 97 58.8
Oeu052459.1 Olea europaea HOM05D000041 ORTHO05D006140 1.1e-24 116.7 97 59.8
Sc04g0002810 Simmondsia chinensis HOM05D000041 ORTHO05D006140 1.1e-24 116.7 97 62.9
ECA247G0382 Erigeron canadensis HOM05D000041 ORTHO05D006140 1.8e-24 115.9 97 58.8
PGR083G0939 Punica granatum HOM05D000041 ORTHO05D006140 1.8e-24 115.9 95 61.1
HanXRQChr04g0107201 Helianthus annuus HOM05D000041 ORTHO05D006140 3.1e-24 115.2 98 58.2
Glyma.04G165900 Glycine max HOM05D000041 ORTHO05D006140 4.1e-24 114.8 96 58.3
Peaxi162Scf00274g00349 Petunia axillaris HOM05D000041 ORTHO05D006140 4.1e-24 114.8 95 61.1
BcaB03g14492 Brassica carinata HOM05D000041 ORTHO05D006140 5.3e-24 114.4 97 58.8
DCAR_026036 Daucus carota HOM05D000041 ORTHO05D006140 5.3e-24 114.4 95 57.9
Sp1g16630 Schrenkiella parvula HOM05D000041 ORTHO05D006140 7.0e-24 114.0 97 58.8
A09p59780 Brassica napus HOM05D000041 ORTHO05D006140 9.1e-24 113.6 97 58.8
BolC5t30395H Brassica oleracea HOM05D000041 ORTHO05D006140 9.1e-24 113.6 97 58.8
Thhalv10007493m.g Eutrema salsugineum HOM05D000041 ORTHO05D006140 9.1e-24 113.6 97 58.8
BcaC05g25761 Brassica carinata HOM05D000041 ORTHO05D006140 1.2e-23 113.2 97 57.7
C05p16920 Brassica napus HOM05D000041 ORTHO05D006140 1.2e-23 113.2 97 57.7
HanXRQChr08g0236771 Helianthus annuus HOM05D000041 ORTHO05D006140 1.2e-23 113.2 97 58.8
vmacro17573 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 1.2e-23 113.2 108 55.6
Potri.012G068100 Populus trichocarpa HOM05D000041 ORTHO05D006140 1.6e-23 112.8 96 58.3
BolC8t51874H Brassica oleracea HOM05D000041 ORTHO05D006140 2.0e-23 112.5 97 57.7
Lalb_Chr08g0235431 Lupinus albus HOM05D000041 ORTHO05D006140 2.0e-23 112.5 95 61.1
C08p43200 Brassica napus HOM05D000041 ORTHO05D006140 2.7e-23 112.1 97 57.7
Carub.0001s1829 Capsella rubella HOM05D000041 ORTHO05D006140 2.7e-23 112.1 97 57.7
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 2.7e-23 112.1 97 61.9
CDE02G0410 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 3.5e-23 111.7 91 61.5
BraA09t41355Z Brassica rapa HOM05D000041 ORTHO05D006140 5.9e-23 110.9 97 56.7
ECA246G3346 Erigeron canadensis HOM05D000041 ORTHO05D006140 5.9e-23 110.9 97 57.7
AT1G18660 Arabidopsis thaliana HOM05D000041 ORTHO05D006140 7.7e-23 110.5 97 57.7
A06p14770 Brassica napus HOM05D000041 ORTHO05D006140 7.7e-23 110.5 97 57.7
BraA06t24600Z Brassica rapa HOM05D000041 ORTHO05D006140 7.7e-23 110.5 97 57.7
CARHR019290 Cardamine hirsuta HOM05D000041 ORTHO05D006140 1.0e-22 110.2 98 56.1
Glyma.06G196600 Glycine max HOM05D000041 ORTHO05D006140 1.0e-22 110.2 96 57.3
VMungo1309G2906 Vigna mungo HOM05D000041 ORTHO05D006140 1.0e-22 110.2 94 58.5
BcaB07g31886 Brassica carinata HOM05D000041 ORTHO05D006140 1.3e-22 109.8 97 57.7
Actinidia19018 Actinidia chinensis HOM05D000041 ORTHO05D006140 1.7e-22 109.4 98 59.2
AL1G31110 Arabidopsis lyrata HOM05D000041 ORTHO05D006140 1.7e-22 109.4 97 56.7
Phvul.009G185000 Phaseolus vulgaris HOM05D000041 ORTHO05D006140 1.7e-22 109.4 96 58.3
Nitab4.5_0001211g0200 Nicotiana tabacum HOM05D000041 ORTHO05D006140 2.2e-22 109.0 95 58.9
Lalb_Chr11g0071711 Lupinus albus HOM05D000041 ORTHO05D006140 2.9e-22 108.6 97 57.7
Nitab4.5_0002756g0120 Nicotiana tabacum HOM05D000041 ORTHO05D006140 2.9e-22 108.6 95 58.9
Aa31LG7G3420 Aethionema arabicum HOM05D000041 ORTHO05D006140 3.8e-22 108.2 97 56.7
Solyc03g115720.3 Solanum lycopersicum HOM05D000041 ORTHO05D006140 3.8e-22 108.2 95 57.9
COL.COLO4_36953 Corchorus olitorius HOM05D000041 ORTHO05D006140 6.5e-22 107.5 95 58.9
BcaC07g41312 Brassica carinata HOM05D000041 ORTHO05D006140 8.5e-22 107.1 97 54.6
THA.LOC104813886 Tarenaya hassleriana HOM05D000041 ORTHO05D006140 8.5e-22 107.1 95 57.9
Haze_07658 Corylus avellana HOM05D000041 ORTHO05D006140 1.1e-21 106.7 101 55.4
Sopen03g034700 Solanum pennellii HOM05D000041 ORTHO05D006140 1.1e-21 106.7 95 57.9
CAN.G479.58 Capsicum annuum HOM05D000041 ORTHO05D006140 1.5e-21 106.3 95 54.7
Duzib084G1175 Durio zibethinus HOM05D000041 ORTHO05D006140 3.2e-21 105.1 96 56.2
Migut.I00214 Erythranthe guttata HOM05D000041 ORTHO05D006140 3.2e-21 105.1 97 57.7
DCAR_016582 Daucus carota HOM05D000041 ORTHO05D006140 7.2e-21 104.0 97 53.6
Rhsim12G0153700 Rhododendron simsii HOM05D000041 ORTHO05D006140 9.4e-21 103.6 100 52.0
AagrBONN_evm.TU.Sc2ySwM_344.2038 Anthoceros agrestis HOM05D000041 ORTHO05D006140 1.6e-20 102.8 98 49.0
Cpa.g.sc13.299 Carica papaya HOM05D000041 ORTHO05D006140 1.6e-20 102.8 97 56.7
unitig_0.g773 Utricularia gibba HOM05D000041 ORTHO05D006140 2.7e-20 102.1 95 52.6
Gohir.D07G075000 Gossypium hirsutum HOM05D000041 ORTHO05D006140 3.6e-20 101.7 97 54.6
CANSAT80G0179 Cannabis sativa HOM05D000041 ORTHO05D006140 4.7e-20 101.3 94 50.0
Gohir.A07G070500 Gossypium hirsutum HOM05D000041 ORTHO05D006140 4.7e-20 101.3 97 54.6
MD06G1197800 Malus domestica HOM05D000041 ORTHO05D006140 4.7e-20 101.3 98 55.1
Lsat_1_v5_gn_5_21580 Lactuca sativa HOM05D000041 ORTHO05D006140 8.0e-20 100.5 97 53.6
Lj9A467T86 Lonicera japonica HOM05D000041 ORTHO05D006140 1.4e-19 99.8 109 51.4
Manes.14G081900 Manihot esculenta HOM05D000041 ORTHO05D006140 6.8e-19 97.4 97 51.5
Duzib205G1692 Durio zibethinus HOM05D000041 ORTHO05D006140 8.8e-19 97.1 97 53.6
Thecc.03G094500 Theobroma cacao HOM05D000041 ORTHO05D006140 8.8e-19 97.1 99 51.5
TWI60G1324 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 1.2e-18 96.7 100 54.0
TWI81G0058 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 1.2e-18 96.7 106 52.8
Gorai.001G079100 Gossypium raimondii HOM05D000041 ORTHO05D006140 1.5e-18 96.3 97 53.6
MD14G1205300 Malus domestica HOM05D000041 ORTHO05D006140 2.0e-18 95.9 97 51.5
MSTRG.23000 Avicennia marina HOM05D000041 ORTHO05D006140 5.7e-18 94.4 97 54.6
FAN08G1333 Fragaria x ananassa HOM05D000041 ORTHO05D006140 2.2e-17 92.4 80 58.8
SEGI_37634 Sequoiadendron giganteum HOM05D000041 ORTHO05D006140 2.2e-17 92.4 78 59.0
Hma1.2p1_2933F.1_g330550 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 2.8e-17 92.0 84 54.8
Pp3c15_14620 Physcomitrium patens HOM05D000041 ORTHO05D006140 3.7e-17 91.7 97 43.3
FAN13G2854 Fragaria x ananassa HOM05D000041 ORTHO05D006140 6.3e-17 90.9 78 60.3
Hma1.2p1_0060F.1_g033480 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 8.3e-17 90.5 65 66.2
Lj5A107T101 Lonicera japonica HOM05D000041 ORTHO05D006140 2.4e-16 89.0 97 46.4
BcaC07g39990 Brassica carinata HOM05D000041 ORTHO05D006140 7.0e-16 87.4 70 57.1
Mapoly0007s0251 Marchantia polymorpha HOM05D000041 ORTHO05D006140 2.9e-14 82.0 97 40.2
Nn4g23280 Nelumbo nucifera HOM05D000041 ORTHO05D006140 1.1e-13 80.1 61 65.6
vmacro16523 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 1.1e-13 80.1 157 32.5
Ciclev10020015m.g Citrus clementina HOM05D000041 ORTHO05D006140 2.7e-12 75.5 97 44.3
MBI16_g06793_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D006140 1.8e-11 72.8 55 60.0
arahy.Tifrunner.gnm1.ann1.C7Z6YQ Arachis hypogaea HOM05D000041 ORTHO05D006140 2.0e-10 69.3 74 52.7
C08p32020 Brassica napus HOM05D000041 ORTHO05D006140 5.4e-08 61.2 53 56.6
Atru.chr9.344 Acer truncatum HOM05D000041 ORTHO05D006140 2.0e-07 59.3 43 58.1
arahy.Tifrunner.gnm1.ann1.JQ6XER Arachis hypogaea HOM05D000041 ORTHO05D006140 5.0e-06 54.7 57 57.9


User provided reference genes

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