Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0179 Trochodendron aralioides HOM05D003175 ORTHO05D003591 7.9e-45 183.3 89 100.0
TAR629G2636 Trochodendron aralioides HOM05D003175 ORTHO05D003591 2.7e-37 158.3 87 88.5
Actinidia38453 Actinidia chinensis HOM05D003175 ORTHO05D003591 4.5e-32 141.0 81 80.2
Dinv42332 Davidia involucrata HOM05D003175 ORTHO05D003591 4.5e-32 141.0 80 81.2
Nn7g37004 Nelumbo nucifera HOM05D003175 ORTHO05D003591 7.7e-32 140.2 82 84.1
QL02p062322 Quercus lobata HOM05D003175 ORTHO05D003591 3.8e-31 137.9 87 71.3
CSS0031089 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 6.5e-31 137.1 90 72.2
Haze_21391 Corylus avellana HOM05D003175 ORTHO05D003591 6.5e-31 137.1 82 76.8
Aqoxy7G02783 Aquilegia oxysepala HOM05D003175 ORTHO05D003591 8.5e-31 136.7 78 82.1
Haze_04011 Corylus avellana HOM05D003175 ORTHO05D003591 8.5e-31 136.7 82 76.8
Prupe.7G207200 Prunus persica HOM05D003175 ORTHO05D003591 1.9e-30 135.6 80 77.5
CSS0022912 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 3.2e-30 134.8 80 75.0
Rhsim03G0087900 Rhododendron simsii HOM05D003175 ORTHO05D003591 3.2e-30 134.8 77 79.2
GSVIVG01015186001 Vitis vinifera HOM05D003175 ORTHO05D003591 3.2e-30 134.8 89 71.9
CSS0001019 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 4.2e-30 134.4 84 72.6
Hma1.2p1_1838F.1_g304840 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 7.2e-30 133.7 82 75.6
CSS0037416 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.6e-29 132.5 84 72.6
Dinv36778 Davidia involucrata HOM05D003175 ORTHO05D003591 1.6e-29 132.5 79 77.2
Cfa006747 Carpinus fangiana HOM05D003175 ORTHO05D003591 2.7e-29 131.7 82 75.6
MD02G1081900 Malus domestica HOM05D003175 ORTHO05D003591 2.7e-29 131.7 80 77.5
MD15G1209200 Malus domestica HOM05D003175 ORTHO05D003591 2.7e-29 131.7 80 77.5
Actinidia29908 Actinidia chinensis HOM05D003175 ORTHO05D003591 3.6e-29 131.3 76 77.6
MBI16_g10338_MAGBIO Magnolia biondii HOM05D003175 ORTHO05D003591 4.7e-29 131.0 84 76.2
CiPaw.08G005200 Carya illinoinensis HOM05D003175 ORTHO05D003591 1.8e-28 129.0 87 71.3
ClCG03G015450 Citrullus lanatus HOM05D003175 ORTHO05D003591 1.8e-28 129.0 83 72.3
CsaV3_1G040590 Cucumis sativus L. HOM05D003175 ORTHO05D003591 2.3e-28 128.6 83 74.7
Oeu011490.1 Olea europaea HOM05D003175 ORTHO05D003591 2.3e-28 128.6 78 76.9
THA.LOC104811748 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 3.0e-28 128.3 78 73.1
MELO3C015489.2 Cucumis melo HOM05D003175 ORTHO05D003591 4.0e-28 127.9 84 73.8
QL01p015391 Quercus lobata HOM05D003175 ORTHO05D003591 5.2e-28 127.5 76 76.3
PGR102G2971 Punica granatum HOM05D003175 ORTHO05D003591 8.8e-28 126.7 71 78.9
HPP92_004704 Vanilla planifolia HOM05D003175 ORTHO05D003591 8.8e-28 126.7 76 76.3
Duzib168G1627 Durio zibethinus HOM05D003175 ORTHO05D003591 1.2e-27 126.3 85 71.8
ECA234G4558 Erigeron canadensis HOM05D003175 ORTHO05D003591 1.2e-27 126.3 70 78.6
Nn8g40845 Nelumbo nucifera HOM05D003175 ORTHO05D003591 1.2e-27 126.3 75 81.3
Ah.14g083830 Amaranthus hybridus HOM05D003175 ORTHO05D003591 1.5e-27 125.9 68 82.4
Potri.004G217400 Populus trichocarpa HOM05D003175 ORTHO05D003591 1.5e-27 125.9 81 67.9
RcHm_v2.0_Chr2g0093641 Rosa chinensis HOM05D003175 ORTHO05D003591 1.5e-27 125.9 75 74.7
PSO170G4980 Papaver somniferum HOM05D003175 ORTHO05D003591 2.6e-27 125.2 82 72.0
Thecc.09G086900 Theobroma cacao HOM05D003175 ORTHO05D003591 2.6e-27 125.2 84 71.4
CANSAT11G2123 Cannabis sativa HOM05D003175 ORTHO05D003591 3.3e-27 124.8 87 67.8
Sed0014824 Sechium edule HOM05D003175 ORTHO05D003591 3.3e-27 124.8 83 73.5
Solyc07g008660.3 Solanum lycopersicum HOM05D003175 ORTHO05D003591 3.3e-27 124.8 79 72.2
SGA_v2.0_scaffold40G15473 Striga asiatica HOM05D003175 ORTHO05D003591 3.3e-27 124.8 84 70.2
EL10Ac6g15408 Beta vulgaris HOM05D003175 ORTHO05D003591 4.4e-27 124.4 68 80.9
HanXRQChr10g0319441 Helianthus annuus HOM05D003175 ORTHO05D003591 4.4e-27 124.4 65 83.1
DCAR_003521 Daucus carota HOM05D003175 ORTHO05D003591 5.7e-27 124.0 87 67.8
Sed0010998 Sechium edule HOM05D003175 ORTHO05D003591 5.7e-27 124.0 67 80.6
Sopen07g004590 Solanum pennellii HOM05D003175 ORTHO05D003591 5.7e-27 124.0 79 72.2
Sabra04G0148100 Salix brachista HOM05D003175 ORTHO05D003591 7.5e-27 123.6 64 82.8
PGSC0003DMG400022985 Solanum tuberosum HOM05D003175 ORTHO05D003591 7.5e-27 123.6 79 72.2
Aa31LG1G18310 Aethionema arabicum HOM05D003175 ORTHO05D003591 9.7e-27 123.2 78 67.9
Atru.chr8.2333 Acer truncatum HOM05D003175 ORTHO05D003591 1.3e-26 122.9 71 76.1
COL.COLO4_18186 Corchorus olitorius HOM05D003175 ORTHO05D003591 1.3e-26 122.9 77 72.7
DCAR_031336 Daucus carota HOM05D003175 ORTHO05D003591 1.7e-26 122.5 83 68.7
Eucgr.C03473 Eucalyptus grandis HOM05D003175 ORTHO05D003591 1.7e-26 122.5 66 81.8
Nitab4.5_0002593g0030 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.7e-26 122.5 72 77.8
PSO063G6037 Papaver somniferum HOM05D003175 ORTHO05D003591 1.7e-26 122.5 82 70.7
THA.LOC104813493 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 1.7e-26 122.5 72 76.4
Ah.03g147100 Amaranthus hybridus HOM05D003175 ORTHO05D003591 2.2e-26 122.1 68 79.4
TWI09G0130 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 2.2e-26 122.1 75 74.7
Ciclev10013100m.g Citrus clementina HOM05D003175 ORTHO05D003591 2.8e-26 121.7 79 74.7
Glyma.09G064500 Glycine max HOM05D003175 ORTHO05D003591 2.8e-26 121.7 68 79.4
Duzib150G0820 Durio zibethinus HOM05D003175 ORTHO05D003591 3.7e-26 121.3 68 79.4
FAN19G2985 Fragaria x ananassa HOM05D003175 ORTHO05D003591 3.7e-26 121.3 84 70.2
FAN23G2612 Fragaria x ananassa HOM05D003175 ORTHO05D003591 3.7e-26 121.3 84 69.0
FAN26G0002 Fragaria x ananassa HOM05D003175 ORTHO05D003591 3.7e-26 121.3 84 69.0
Gohir.D05G031900 Gossypium hirsutum HOM05D003175 ORTHO05D003591 3.7e-26 121.3 75 73.3
Gorai.009G032100 Gossypium raimondii HOM05D003175 ORTHO05D003591 3.7e-26 121.3 77 71.4
TWI73G0679 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 3.7e-26 121.3 75 73.3
Eucgr.C03471 Eucalyptus grandis HOM05D003175 ORTHO05D003591 4.8e-26 120.9 74 75.7
vmacro23436 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 4.8e-26 120.9 70 77.1
CARHR270680 Cardamine hirsuta HOM05D003175 ORTHO05D003591 6.3e-26 120.6 83 69.9
Peaxi162Scf01425g00001 Petunia axillaris HOM05D003175 ORTHO05D003591 6.3e-26 120.6 84 69.0
Carub.0008s1742 Capsella rubella HOM05D003175 ORTHO05D003591 8.3e-26 120.2 76 73.7
FAN26G2348 Fragaria x ananassa HOM05D003175 ORTHO05D003591 1.4e-25 119.4 84 67.9
Nitab4.5_0001519g0020 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.4e-25 119.4 77 71.4
Nitab4.5_0001586g0160 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.4e-25 119.4 80 70.0
Sc18g0002200 Simmondsia chinensis HOM05D003175 ORTHO05D003591 1.4e-25 119.4 63 82.5
AUR62003470 Chenopodium quinoa HOM05D003175 ORTHO05D003591 1.8e-25 119.0 68 76.5
FvH4_1g07750 Fragaria vesca HOM05D003175 ORTHO05D003591 1.8e-25 119.0 82 69.5
FAN28G0810 Fragaria x ananassa HOM05D003175 ORTHO05D003591 1.8e-25 119.0 84 67.9
Lsat_1_v5_gn_5_142921 Lactuca sativa HOM05D003175 ORTHO05D003591 1.8e-25 119.0 78 70.5
Cpa.g.sc128.7 Carica papaya HOM05D003175 ORTHO05D003591 3.1e-25 118.2 78 67.9
Gohir.A10G064800 Gossypium hirsutum HOM05D003175 ORTHO05D003591 4.1e-25 117.9 82 67.1
Peaxi162Scf01604g00008 Petunia axillaris HOM05D003175 ORTHO05D003591 4.1e-25 117.9 61 83.6
CDE06G2360 Ceratophyllum demersum HOM05D003175 ORTHO05D003591 5.3e-25 117.5 83 65.1
Glyma.15G170800 Glycine max HOM05D003175 ORTHO05D003591 5.3e-25 117.5 68 76.5
Lalb_Chr08g0232311 Lupinus albus HOM05D003175 ORTHO05D003591 5.3e-25 117.5 79 68.4
PSO017G4091 Papaver somniferum HOM05D003175 ORTHO05D003591 7.0e-25 117.1 83 67.5
Gohir.D10G066300 Gossypium hirsutum HOM05D003175 ORTHO05D003591 9.1e-25 116.7 82 67.1
CSS0031311 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.2e-24 116.3 81 69.1
Gorai.011G070400 Gossypium raimondii HOM05D003175 ORTHO05D003591 1.2e-24 116.3 87 65.5
SEGI_17182 Sequoiadendron giganteum HOM05D003175 ORTHO05D003591 1.2e-24 116.3 64 79.7
Gohir.A05G030500 Gossypium hirsutum HOM05D003175 ORTHO05D003591 1.6e-24 115.9 72 72.2
Manes.01G198600 Manihot esculenta HOM05D003175 ORTHO05D003591 2.0e-24 115.5 86 64.0
MSTRG.5776 Avicennia marina HOM05D003175 ORTHO05D003591 3.5e-24 114.8 87 62.1
AUR62017777 Chenopodium quinoa HOM05D003175 ORTHO05D003591 3.5e-24 114.8 87 62.1
Thhalv10014987m.g Eutrema salsugineum HOM05D003175 ORTHO05D003591 4.5e-24 114.4 87 64.4
HanXRQChr12g0354621 Helianthus annuus HOM05D003175 ORTHO05D003591 4.5e-24 114.4 65 75.4
Cc06_g11550 Coffea canephora HOM05D003175 ORTHO05D003591 7.7e-24 113.6 87 64.4
Phvul.009G231300 Phaseolus vulgaris HOM05D003175 ORTHO05D003591 7.7e-24 113.6 67 74.6
VMungo0251G0584 Vigna mungo HOM05D003175 ORTHO05D003591 1.0e-23 113.2 67 74.6
Sp6g18640 Schrenkiella parvula HOM05D003175 ORTHO05D003591 1.3e-23 112.8 87 63.2
AL8G32800 Arabidopsis lyrata HOM05D003175 ORTHO05D003591 1.7e-23 112.5 84 63.1
BcaC03g14195 Brassica carinata HOM05D003175 ORTHO05D003591 1.7e-23 112.5 85 61.2
A02p08860 Brassica napus HOM05D003175 ORTHO05D003591 1.7e-23 112.5 85 61.2
C02p14770 Brassica napus HOM05D003175 ORTHO05D003591 1.7e-23 112.5 85 61.2
BolC2t07606H Brassica oleracea HOM05D003175 ORTHO05D003591 1.7e-23 112.5 85 61.2
BraA02t05955Z Brassica rapa HOM05D003175 ORTHO05D003591 1.7e-23 112.5 85 61.2
Hma1.2p1_1453F.1_g284310 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 1.7e-23 112.5 79 67.1
Nitab4.5_0004056g0030 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.7e-23 112.5 80 67.5
Lj6g0021196 Lotus japonicus HOM05D003175 ORTHO05D003591 2.2e-23 112.1 69 72.5
AL52U10030 Arabidopsis lyrata HOM05D001215 ORTHO05D003591 2.9e-23 111.7 88 63.6
AT5G56940 Arabidopsis thaliana HOM05D003175 ORTHO05D003591 2.9e-23 111.7 84 63.1
A10p14260 Brassica napus HOM05D003175 ORTHO05D003591 2.9e-23 111.7 79 64.6
BraA10t43517Z Brassica rapa HOM05D003175 ORTHO05D003591 2.9e-23 111.7 79 64.6
PSO384G0167 Papaver somniferum HOM05D003175 ORTHO05D003591 2.9e-23 111.7 57 86.0
TPR.G13431 Trifolium pratense HOM05D003175 ORTHO05D003591 2.9e-23 111.7 68 70.6
SGA_v2.0_scaffold49G18150 Striga asiatica HOM05D003175 ORTHO05D003591 3.8e-23 111.3 68 73.5
PSO063G1429 Papaver somniferum HOM05D003175 ORTHO05D003591 6.5e-23 110.5 75 68.0
BcaB08g36038 Brassica carinata HOM05D003175 ORTHO05D003591 1.1e-22 109.8 85 61.2
PSO384G0269 Papaver somniferum HOM05D003175 ORTHO05D003591 1.1e-22 109.8 57 84.2
vmacro06300 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 1.1e-22 109.8 76 68.4
CDE02G0210 Ceratophyllum demersum HOM05D003175 ORTHO05D003591 1.5e-22 109.4 83 66.3
Medtr2g039750 Medicago truncatula HOM05D003175 ORTHO05D003591 1.9e-22 109.0 65 72.3
Os09g0498100 Oryza sativa ssp. japonica HOM05D003175 ORTHO05D003591 1.9e-22 109.0 58 84.5
VMungo0251G0230 Vigna mungo HOM05D003175 ORTHO05D003591 1.9e-22 109.0 67 73.1
SGA_v2.0_scaffold337G49169 Striga asiatica HOM05D003175 ORTHO05D003591 2.5e-22 108.6 76 68.4
TPR.G10463 Trifolium pratense HOM05D003175 ORTHO05D003591 2.5e-22 108.6 58 81.0
arahy.Tifrunner.gnm1.ann1.24WPAI Arachis hypogaea HOM05D003175 ORTHO05D003591 3.2e-22 108.2 84 61.9
arahy.Tifrunner.gnm1.ann1.TVN50Z Arachis hypogaea HOM05D003175 ORTHO05D003591 3.2e-22 108.2 84 61.9
PSO384G5082 Papaver somniferum HOM05D003175 ORTHO05D003591 5.5e-22 107.5 57 82.5
Migut.J00455 Erythranthe guttata HOM05D003175 ORTHO05D003591 7.2e-22 107.1 87 59.8
Medtr5g014070 Medicago truncatula HOM05D003175 ORTHO05D003591 9.4e-22 106.7 79 63.3
Os08g0517900 Oryza sativa ssp. japonica HOM05D003175 ORTHO05D003591 9.4e-22 106.7 82 63.4
ATR0626G012 Amborella trichopoda HOM05D003175 ORTHO05D003591 1.6e-21 105.9 87 62.1
Duzib187G0793 Durio zibethinus HOM05D003175 ORTHO05D003591 1.6e-21 105.9 84 61.9
Hma1.2p1_3088F.1_g332510 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 2.1e-21 105.5 80 65.0
Psat1g140000 Pisum sativum HOM05D003175 ORTHO05D003591 2.7e-21 105.1 64 71.9
Zm00001eb317180 Zea mays HOM05D003175 ORTHO05D003591 3.6e-21 104.8 77 66.2
BcaC01g06456 Brassica carinata HOM05D003175 ORTHO05D003591 1.2e-19 99.8 85 58.8
BcaNung05244 Brassica carinata HOM05D003175 ORTHO05D003591 1.2e-19 99.8 85 58.8
C03p15250 Brassica napus HOM05D003175 ORTHO05D003591 1.2e-19 99.8 85 58.8
Hund04301 Selenicereus undatus HOM05D003175 ORTHO05D003591 2.4e-17 92.0 76 59.2
ATR0724G037 Amborella trichopoda HOM05D003175 ORTHO05D003591 9.1e-17 90.1 57 75.4
Manes.05G131300 Manihot esculenta HOM05D003175 ORTHO05D003591 2.7e-16 88.6 55 70.9
TWI53G2020 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 1.7e-15 85.9 86 52.3
THA.LOC104804346 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 4.2e-14 81.3 58 60.3
Aqoxy3G03231 Aquilegia oxysepala HOM05D003175 ORTHO05D003591 2.8e-13 78.6 85 50.6
BolC9t57700H Brassica oleracea HOM05D003175 ORTHO05D003591 3.0e-12 75.1 46 69.6
SEGI_09210 Sequoiadendron giganteum HOM05D003175 ORTHO05D003591 3.0e-12 75.1 64 53.1
AT4G34620 Arabidopsis thaliana HOM05D003175 ORTHO05D003591 1.5e-11 72.8 61 50.8
vmacro12780 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 4.4e-11 71.2 35 88.6
Carub.0007s0566 Capsella rubella HOM05D003175 ORTHO05D003591 5.7e-11 70.9 61 50.8
Potri.013G128200 Populus trichocarpa HOM05D003175 ORTHO05D003591 7.5e-11 70.5 46 67.4
Sabra13G0107100 Salix brachista HOM05D003175 ORTHO05D003591 7.5e-11 70.5 64 56.2
AL7G16580 Arabidopsis lyrata HOM05D003175 ORTHO05D003591 1.3e-10 69.7 61 49.2
BraA01t00374Z Brassica rapa HOM05D003175 ORTHO05D003591 2.2e-10 68.9 61 49.2
Thhalv10026606m.g Eutrema salsugineum HOM05D003175 ORTHO05D003591 2.2e-10 68.9 61 49.2
Sp7g32410 Schrenkiella parvula HOM05D003175 ORTHO05D003591 2.2e-10 68.9 61 49.2
unitig_22.g5106 Utricularia gibba HOM05D003175 ORTHO05D003591 2.2e-10 68.9 36 86.1
Aa31LG2G15900 Aethionema arabicum HOM05D003175 ORTHO05D003591 2.8e-10 68.6 59 55.9
BcaNung00682 Brassica carinata HOM05D003175 ORTHO05D003591 2.8e-10 68.6 61 49.2
BcaNung04917 Brassica carinata HOM05D003175 ORTHO05D003591 2.8e-10 68.6 61 47.5
BcaNung04920 Brassica carinata HOM05D003175 ORTHO05D003591 2.8e-10 68.6 61 47.5
C01p04180 Brassica napus HOM05D003175 ORTHO05D003591 2.8e-10 68.6 61 49.2
BolC1t00406H Brassica oleracea HOM05D003175 ORTHO05D003591 2.8e-10 68.6 61 49.2
A01p03870 Brassica napus HOM05D003175 ORTHO05D003591 4.9e-10 67.8 61 49.2
arahy.Tifrunner.gnm1.ann1.S7RYVI Arachis hypogaea HOM05D003175 ORTHO05D003591 4.1e-09 64.7 73 49.3
AagrBONN_evm.TU.Sc2ySwM_228.1093 Anthoceros agrestis HOM05D003175 ORTHO05D003591 1.6e-08 62.8 54 55.6
arahy.Tifrunner.gnm1.ann1.44TKHA Arachis hypogaea HOM05D001215 ORTHO05D001387 1.6e-08 62.8 73 49.3
Pp3c2_38140 Physcomitrium patens HOM05D003175 ORTHO05D003591 2.7e-08 62.0 44 61.4
BcaB01g04434 Brassica carinata HOM05D003175 ORTHO05D003591 3.5e-08 61.6 59 55.9
Mapoly0087s0037 Marchantia polymorpha HOM05D003175 ORTHO05D003591 5.9e-08 60.8 51 52.9
MCO07G131 Micromonas commoda HOM05D003175 ORTHO05D003591 7.8e-08 60.5 47 59.6
arahy.Tifrunner.gnm1.ann1.1EL4AZ Arachis hypogaea HOM05D003175 ORTHO05D021464 3.9e-07 58.2 33 75.8
Glyma.20G186000 Glycine max HOM05D003175 ORTHO05D003591 1.1e-06 56.6 68 42.6
Psat6g114960 Pisum sativum HOM05D003175 ORTHO05D003591 1.1e-06 56.6 53 49.1
Glyma.10G204500 Glycine max HOM05D003175 ORTHO05D003591 2.5e-06 55.5 73 41.1
Medtr1g076310 Medicago truncatula HOM05D003175 ORTHO05D003591 2.5e-06 55.5 72 38.9
Ca_09878_v3 Cicer arietinum L. HOM05D003175 ORTHO05D003591 4.3e-06 54.7 72 41.7
Phvul.007G102300 Phaseolus vulgaris HOM05D003175 ORTHO05D003591 9.5e-06 53.5 46 54.3


User provided reference genes

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