Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 6.1e-146 520.8 258 100.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 8.9e-113 410.6 252 80.2
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.0e-112 409.5 249 79.9
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.6e-112 409.1 253 79.8
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.4e-112 408.7 249 81.9
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.2e-111 406.0 250 80.8
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 6.3e-111 404.4 257 79.0
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 6.3e-111 404.4 252 78.2
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.1e-110 403.7 254 79.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.8e-110 402.9 249 79.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.2e-110 402.1 250 80.4
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.2e-110 402.1 255 76.1
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.2e-109 400.2 251 80.5
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.6e-109 399.8 262 76.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.6e-109 399.8 250 78.8
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.7e-109 399.1 252 79.4
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 5.9e-109 397.9 257 76.3
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.3e-108 396.7 258 74.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.3e-108 396.7 259 77.6
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.3e-108 396.7 253 77.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 2.3e-108 396.0 253 76.3
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.9e-108 395.6 258 72.9
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.1e-107 393.7 258 75.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.5e-107 392.5 253 77.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 7.3e-107 391.0 262 75.2
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.6e-106 389.8 252 76.2
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.8e-106 389.0 252 77.8
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 6.2e-106 387.9 263 74.5
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 8.0e-106 387.5 252 75.4
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.3e-105 386.0 259 73.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.3e-105 386.0 249 75.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 1.2e-104 383.6 255 74.1
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.2e-104 383.6 261 73.9
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.2e-104 383.6 231 79.2
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.5e-104 383.3 253 75.1
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.6e-104 382.5 254 77.2
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.6e-104 382.5 258 76.0
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 4.4e-104 381.7 255 76.9
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.4e-104 381.7 255 76.9
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 7.5e-104 380.9 259 74.1
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.3e-103 380.2 249 75.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.3e-103 380.2 253 74.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.2e-103 379.4 249 74.3
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 3.7e-103 378.6 262 76.0
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.9e-103 378.3 252 71.4
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 6.4e-103 377.9 249 73.9
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 8.3e-103 377.5 267 72.7
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.9e-102 376.3 255 72.5
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.9e-102 376.3 239 75.7
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 5.4e-102 374.8 221 82.8
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 5.4e-102 374.8 279 70.3
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.2e-101 373.6 253 75.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.2e-101 373.6 270 71.5
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.6e-101 373.2 253 72.7
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.7e-101 372.5 249 73.5
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 2.7e-101 372.5 268 71.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 7.8e-101 370.9 238 74.4
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.0e-100 370.5 263 69.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.0e-100 370.5 280 69.3
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.3e-100 369.4 249 73.1
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.1e-99 367.1 251 72.9
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.5e-99 366.7 255 73.3
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.5e-99 366.7 237 74.3
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.5e-99 366.7 262 72.1
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 3.3e-99 365.5 258 70.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 3.3e-99 365.5 237 74.3
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 5.6e-99 364.8 238 73.9
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 5.6e-99 364.8 254 70.5
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 9.5e-99 364.0 255 72.9
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.6e-98 363.2 257 70.0
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.6e-98 363.2 272 66.9
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 6.2e-98 361.3 260 68.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 6.2e-98 361.3 254 73.2
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 8.1e-98 360.9 236 73.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 3.1e-97 359.0 264 67.8
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 3.1e-97 359.0 264 67.8
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 5.2e-97 358.2 230 72.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 8.9e-97 357.5 242 71.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-96 356.3 260 68.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 2.6e-96 355.9 261 69.0
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 9.8e-96 354.0 209 81.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 9.8e-96 354.0 259 68.3
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 2.9e-95 352.4 260 66.9
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 3.7e-95 352.1 247 70.4
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.9e-95 351.7 260 68.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 8.3e-95 350.9 249 69.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 8.3e-95 350.9 260 68.1
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.9e-94 349.7 200 85.0
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 9.2e-94 347.4 317 58.7
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.5e-93 345.5 333 55.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.0e-92 344.0 212 77.4
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.3e-91 339.0 233 71.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 4.3e-91 338.6 209 80.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 2.1e-90 336.3 210 80.5
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.8e-90 335.9 248 68.5
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 6.8e-89 331.3 217 73.7
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.5e-88 330.1 210 75.7
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 2.6e-88 329.3 214 75.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.3e-87 327.0 209 75.6
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.4e-86 322.8 200 80.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.7e-79 300.1 198 72.2
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.0e-76 290.8 337 51.6
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 4.3e-75 285.4 223 64.6
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 5.6e-75 285.0 167 87.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.9e-71 272.7 231 58.4
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.7e-68 263.5 175 76.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 3.1e-65 252.7 233 53.2
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.3e-63 247.3 158 75.9
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.1e-61 240.0 230 53.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.1e-54 217.6 233 49.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.1e-53 213.4 134 79.1
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.3e-52 209.9 136 72.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.3e-47 194.1 144 67.4
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 6.5e-47 191.8 143 67.1
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 3.2e-46 189.5 143 66.4
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.0e-44 183.0 117 71.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.9e-44 182.6 183 54.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.9e-43 180.3 115 79.1
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.1e-38 164.5 122 65.6
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 4.3e-35 152.5 96 76.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 6.9e-33 145.2 95 74.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 8.5e-31 138.3 79 79.7
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 7.4e-27 125.2 112 58.9
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 7.2e-22 108.6 120 52.5
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 1.5e-14 84.3 47 74.5
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.9e-14 84.0 200 28.0
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 3.0e-12 76.6 113 43.4
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 2.6e-11 73.6 113 42.5
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 5.9e-08 62.4 53 62.3


User provided reference genes

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