Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.6e-73 279.3 133 100.0
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 5.3e-53 211.1 107 95.3
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 3.6e-41 171.8 108 76.9
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.7e-41 171.4 117 75.2
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 1.1e-39 166.8 107 77.6
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 8.2e-38 160.6 109 73.4
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 8.2e-38 160.6 109 73.4
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 4.1e-37 158.3 107 71.0
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.2e-36 156.8 113 69.0
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 1.2e-36 156.8 111 70.3
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 2.9e-35 152.1 110 67.3
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 3.8e-35 151.8 108 70.4
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 3.8e-35 151.8 114 67.5
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 8.5e-35 150.6 108 69.4
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 8.5e-35 150.6 106 70.8
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 1.1e-34 150.2 117 65.0
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.1e-34 150.2 113 69.9
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 1.5e-34 149.8 129 64.3
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 1.9e-34 149.4 125 61.6
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 1.9e-34 149.4 106 69.8
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 3.2e-34 148.7 102 71.6
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 4.2e-34 148.3 99 72.7
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 5.5e-34 147.9 108 67.6
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 5.5e-34 147.9 112 69.6
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 5.5e-34 147.9 102 72.5
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 7.2e-34 147.5 116 66.4
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 7.2e-34 147.5 103 71.8
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 1.2e-33 146.7 110 67.3
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 2.1e-33 146.0 108 66.7
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 2.7e-33 145.6 108 66.7
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 2.7e-33 145.6 108 66.7
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 2.7e-33 145.6 122 64.8
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.7e-33 145.6 102 72.5
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 3.6e-33 145.2 122 61.5
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 3.6e-33 145.2 110 65.5
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 4.7e-33 144.8 106 73.6
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 4.7e-33 144.8 123 61.0
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 4.7e-33 144.8 105 69.5
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 1.0e-32 143.7 113 65.5
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.0e-32 143.7 112 67.0
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 1.0e-32 143.7 107 68.2
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 1.4e-32 143.3 117 64.1
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 1.8e-32 142.9 106 68.9
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 2.3e-32 142.5 122 60.7
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.0e-32 142.1 110 64.5
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 3.0e-32 142.1 125 63.2
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 4.0e-32 141.7 109 65.1
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 4.0e-32 141.7 125 63.2
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 4.0e-32 141.7 104 67.3
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 5.2e-32 141.4 123 61.0
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 5.2e-32 141.4 125 62.4
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 8.8e-32 140.6 91 74.7
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 8.8e-32 140.6 99 68.7
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 1.2e-31 140.2 110 63.6
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.2e-31 140.2 108 65.7
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 1.2e-31 140.2 109 64.2
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.2e-31 140.2 109 64.2
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.2e-31 140.2 114 62.3
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 1.2e-31 140.2 121 58.7
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 1.5e-31 139.8 118 60.2
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 1.5e-31 139.8 99 69.7
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 2.0e-31 139.4 102 69.6
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 2.6e-31 139.0 98 68.4
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.6e-31 139.0 102 70.6
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 3.4e-31 138.7 118 59.3
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 4.4e-31 138.3 120 57.5
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 4.4e-31 138.3 106 63.2
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 4.4e-31 138.3 106 63.2
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 5.7e-31 137.9 117 61.5
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 5.7e-31 137.9 118 59.3
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 7.5e-31 137.5 110 61.8
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 7.5e-31 137.5 131 55.7
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 9.7e-31 137.1 110 63.6
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 1.3e-30 136.7 106 64.2
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 1.7e-30 136.3 114 60.5
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 1.7e-30 136.3 103 65.0
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 1.7e-30 136.3 116 62.1
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 2.2e-30 136.0 105 64.8
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 2.2e-30 136.0 105 64.8
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 2.2e-30 136.0 120 56.7
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 3.7e-30 135.2 113 61.9
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 4.8e-30 134.8 123 56.1
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 6.3e-30 134.4 105 62.9
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 1.1e-29 133.7 119 61.3
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.4e-29 133.3 106 64.2
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 1.8e-29 132.9 108 60.2
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 4.1e-29 131.7 120 57.5
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 4.1e-29 131.7 108 60.2
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 5.3e-29 131.3 107 62.6
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 5.3e-29 131.3 91 69.2
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 5.3e-29 131.3 103 61.2
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 7.0e-29 131.0 97 66.0
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 7.0e-29 131.0 109 60.6
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 1.2e-28 130.2 108 63.0
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 2.0e-28 129.4 102 62.7
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 2.0e-28 129.4 111 59.5
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 3.5e-28 128.6 99 61.6
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 4.5e-28 128.3 105 60.0
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 4.5e-28 128.3 99 61.6
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 4.5e-28 128.3 105 60.0
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 4.5e-28 128.3 118 56.8
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 5.9e-28 127.9 106 58.5
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 7.7e-28 127.5 126 54.8
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 1.0e-27 127.1 116 55.2
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 1.3e-27 126.7 100 65.0
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 1.7e-27 126.3 105 59.0
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 1.7e-27 126.3 105 59.0
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 2.9e-27 125.6 97 63.9
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 3.8e-27 125.2 75 78.7
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 5.0e-27 124.8 112 56.2
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 5.0e-27 124.8 85 71.8
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.9e-26 122.9 116 54.3
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 2.5e-26 122.5 77 74.0
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 9.4e-26 120.6 97 60.8
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 1.2e-25 120.2 97 59.8
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 2.7e-25 119.0 82 65.9
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 8.0e-25 117.5 79 69.6
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 3.0e-24 115.5 108 54.6
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 2.6e-23 112.5 106 52.8
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 2.8e-22 109.0 128 46.9
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 3.7e-22 108.6 84 59.5
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 7.7e-20 100.9 63 73.0
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.5e-18 96.7 63 68.3
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 2.1e-17 92.8 88 54.5
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 7.5e-15 84.3 66 62.1
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 2.2e-14 82.8 47 80.9
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 2.0e-12 76.3 58 63.8
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 3.9e-11 72.0 55 61.8
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.1e-10 70.5 80 43.8
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 3.3e-10 68.9 68 55.9
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 8.0e-09 64.3 37 70.3
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 2.6e-07 59.3 57 49.1
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 3.4e-07 58.9 78 42.3


User provided reference genes

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