Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0566 Trochodendron aralioides HOM05D003364 ORTHO05D003795 2.0e-86 322.4 166 100.0
TAR633G2316 Trochodendron aralioides HOM05D003364 ORTHO05D003795 5.8e-57 224.6 164 75.0
CSS0050150 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 1.0e-53 213.8 164 68.3
GSVIVG01033713001 Vitis vinifera HOM05D003364 ORTHO05D003795 2.8e-51 205.7 164 68.3
CSS0048678 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 4.8e-51 204.9 164 66.5
Dinv37357 Davidia involucrata HOM05D003364 ORTHO05D003795 1.1e-50 203.8 163 68.1
Dinv35835 Davidia involucrata HOM05D003364 ORTHO05D003795 4.0e-50 201.8 163 67.5
QL07p041392 Quercus lobata HOM05D003364 ORTHO05D003795 1.2e-49 200.3 164 67.7
Duzib106G1154 Durio zibethinus HOM05D003364 ORTHO05D003795 6.4e-48 194.5 164 64.0
Manes.09G048862 Manihot esculenta HOM05D003364 ORTHO05D003795 1.9e-47 193.0 133 78.2
Gohir.D04G106900 Gossypium hirsutum HOM05D003364 ORTHO05D003795 7.1e-47 191.0 133 76.7
Gorai.009G411000 Gossypium raimondii HOM05D003364 ORTHO05D003795 7.1e-47 191.0 133 76.7
Thecc.05G075500 Theobroma cacao HOM05D003364 ORTHO05D003795 9.3e-47 190.7 164 64.6
CiPaw.10G002500 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.0e-45 187.2 164 63.4
Gohir.D11G342100 Gossypium hirsutum HOM05D003364 ORTHO05D003795 1.7e-45 186.4 164 64.0
Gorai.007G372100 Gossypium raimondii HOM05D003364 ORTHO05D003795 1.7e-45 186.4 164 64.0
Gohir.A04G068400 Gossypium hirsutum HOM05D003364 ORTHO05D003795 2.3e-45 186.0 133 75.2
Prupe.7G123000 Prunus persica HOM05D003364 ORTHO05D003795 8.7e-45 184.1 134 73.9
Nn6g35170 Nelumbo nucifera HOM05D003364 ORTHO05D003795 1.1e-44 183.7 168 63.7
QL07p041377 Quercus lobata HOM05D003364 ORTHO05D003795 1.5e-44 183.3 155 65.8
vmacro07356 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 1.5e-44 183.3 133 72.2
Sc20g0005750 Simmondsia chinensis HOM05D003364 ORTHO05D003795 1.9e-44 183.0 133 72.9
MD12G1102900 Malus domestica HOM05D003364 ORTHO05D003795 4.3e-44 181.8 165 61.2
TWI74G0085 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 5.6e-44 181.4 164 64.6
TWI77G0900 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 5.6e-44 181.4 164 65.2
Duzib128G0277 Durio zibethinus HOM05D003364 ORTHO05D003795 7.3e-44 181.0 158 62.0
Gohir.A11G323000 Gossypium hirsutum HOM05D003364 ORTHO05D003795 7.3e-44 181.0 164 62.8
Haze_19478 Corylus avellana HOM05D003364 ORTHO05D003795 9.6e-44 180.6 164 62.2
Manes.08G015900 Manihot esculenta HOM05D003364 ORTHO05D003795 9.6e-44 180.6 162 61.1
Potri.006G119200 Populus trichocarpa HOM05D003364 ORTHO05D003795 2.1e-43 179.5 168 63.7
COL.COLO4_22254 Corchorus olitorius HOM05D003364 ORTHO05D003795 2.8e-43 179.1 164 61.6
MELO3C009407.2 Cucumis melo HOM05D003364 ORTHO05D003795 8.1e-43 177.6 164 62.8
CsaV3_3G036470 Cucumis sativus L. HOM05D003364 ORTHO05D003795 1.1e-42 177.2 164 62.8
Duzib093G1696 Durio zibethinus HOM05D003364 ORTHO05D003795 1.4e-42 176.8 133 74.4
Sed0022654 Sechium edule HOM05D003364 ORTHO05D003795 1.4e-42 176.8 164 63.4
MD14G1097000 Malus domestica HOM05D003364 ORTHO05D003795 2.4e-42 176.0 161 59.6
Lj3A995G63 Lonicera japonica HOM05D003364 ORTHO05D003795 3.1e-42 175.6 163 62.6
CiPaw.09G005100 Carya illinoinensis HOM05D003364 ORTHO05D003795 5.3e-42 174.9 161 59.6
Ciclev10009355m.g Citrus clementina HOM05D003364 ORTHO05D003795 6.9e-42 174.5 133 72.2
Potri.016G097000 Populus trichocarpa HOM05D003364 ORTHO05D003795 6.9e-42 174.5 134 73.9
Cpa.g.sc5.126 Carica papaya HOM05D003364 ORTHO05D003795 1.2e-41 173.7 165 61.2
EL10As10g23959 Beta vulgaris HOM05D003364 ORTHO05D003795 1.5e-41 173.3 127 72.4
Sc02g0001390 Simmondsia chinensis HOM05D003364 ORTHO05D003795 2.6e-41 172.6 133 72.2
Sed0015688 Sechium edule HOM05D003364 ORTHO05D003795 4.5e-41 171.8 164 61.6
Eucgr.A01593 Eucalyptus grandis HOM05D003364 ORTHO05D003795 9.9e-41 170.6 133 72.9
Aqoxy2G01564 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 1.3e-40 170.2 135 73.3
AUR62030232 Chenopodium quinoa HOM05D003364 ORTHO05D003795 2.9e-40 169.1 133 67.7
Nitab4.5_0009839g0030 Nicotiana tabacum HOM05D003364 ORTHO05D003795 2.9e-40 169.1 133 71.4
Nn2g13901 Nelumbo nucifera HOM05D003364 ORTHO05D003795 6.4e-40 167.9 135 71.9
Hund12309 Selenicereus undatus HOM05D003364 ORTHO05D003795 8.4e-40 167.5 142 62.7
vmacro08805 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 8.4e-40 167.5 145 65.5
Rhsim04G0138800 Rhododendron simsii HOM05D003364 ORTHO05D003795 2.4e-39 166.0 127 70.9
Actinidia32470 Actinidia chinensis HOM05D003364 ORTHO05D003795 3.2e-39 165.6 167 58.7
MSTRG.5787 Avicennia marina HOM05D003364 ORTHO05D003795 3.2e-39 165.6 164 55.5
Cc06_g04780 Coffea canephora HOM05D003364 ORTHO05D003795 4.2e-39 165.2 164 57.9
AUR62040195 Chenopodium quinoa HOM05D003364 ORTHO05D003795 2.7e-38 162.5 133 65.4
Nitab4.5_0000725g0070 Nicotiana tabacum HOM05D003364 ORTHO05D003795 3.5e-38 162.2 133 68.4
AUR62042710 Chenopodium quinoa HOM05D003364 ORTHO05D003795 7.9e-38 161.0 133 66.9
Lj1A203T55 Lonicera japonica HOM05D003364 ORTHO05D003795 7.9e-38 161.0 158 58.2
Sabra06G0093800 Salix brachista HOM05D003364 ORTHO05D003795 7.9e-38 161.0 167 56.3
Aqoxy5G02878 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 5.1e-37 158.3 131 72.5
EL10Ac7g16703 Beta vulgaris HOM05D003364 ORTHO05D003795 1.9e-36 156.4 127 65.4
DCAR_020798 Daucus carota HOM05D003364 ORTHO05D003795 1.9e-36 156.4 162 56.2
Migut.F01371 Erythranthe guttata HOM05D003364 ORTHO05D003795 1.3e-35 153.7 164 54.3
Migut.J00476 Erythranthe guttata HOM05D003364 ORTHO05D003795 1.3e-35 153.7 164 54.9
MBI11_g29030_MAGBIO Magnolia biondii HOM05D003364 ORTHO05D003795 1.3e-35 153.7 161 60.2
Migut.J00474 Erythranthe guttata HOM05D003364 ORTHO05D003795 2.8e-35 152.5 164 54.3
Rhsim03G0085800 Rhododendron simsii HOM05D003364 ORTHO05D003795 2.8e-35 152.5 210 47.6
Sabra16G0100200 Salix brachista HOM05D003364 ORTHO05D003795 2.8e-35 152.5 134 70.1
RcHm_v2.0_Chr3g0471291 Rosa chinensis HOM05D003364 ORTHO05D003795 8.1e-35 151.0 133 66.2
PGR142G3973 Punica granatum HOM05D003364 ORTHO05D003795 1.8e-34 149.8 164 54.9
Nitab4.5_0005208g0010 Nicotiana tabacum HOM05D003364 ORTHO05D003795 5.3e-34 148.3 133 63.9
Aa31LG10G8290 Aethionema arabicum HOM05D003364 ORTHO05D003795 9.0e-34 147.5 161 52.8
HanXRQChr01g0019311 Helianthus annuus HOM05D003364 ORTHO05D003795 9.0e-34 147.5 133 65.4
FAN14G4580 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.6e-33 146.0 135 67.4
FvH4_6g17210 Fragaria vesca HOM05D003364 ORTHO05D003795 3.4e-33 145.6 135 67.4
Glyma.03G188100 Glycine max HOM05D003364 ORTHO05D003795 3.4e-33 145.6 164 54.9
VMungo1383G1043 Vigna mungo HOM05D003364 ORTHO05D003795 3.4e-33 145.6 164 55.5
Oeu040563.2 Olea europaea HOM05D003364 ORTHO05D003795 5.8e-33 144.8 132 63.6
Phvul.001G183500 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 5.8e-33 144.8 164 54.9
THA.LOC104818582 Tarenaya hassleriana HOM05D003364 ORTHO05D003795 7.6e-33 144.4 130 61.5
Sp5g09200 Schrenkiella parvula HOM05D003364 ORTHO05D003795 1.0e-32 144.1 163 52.1
Peaxi162Scf00110g00816 Petunia axillaris HOM05D003364 ORTHO05D003795 1.3e-32 143.7 126 65.9
FAN02G0897 Fragaria x ananassa HOM05D003364 ORTHO05D003795 1.7e-32 143.3 135 65.2
Glyma.19G188300 Glycine max HOM05D003364 ORTHO05D003795 1.7e-32 143.3 164 54.3
Zm00001eb006510 Zea mays HOM05D003364 ORTHO05D003795 2.9e-32 142.5 130 66.9
Psat3g038040 Pisum sativum HOM05D003364 ORTHO05D003795 3.8e-32 142.1 133 63.9
AL5G34000 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 8.4e-32 141.0 163 52.8
Ca_08937_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 1.4e-31 140.2 164 52.4
Ca_30110_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 1.4e-31 140.2 164 52.4
Peaxi162Scf00146g00018 Petunia axillaris HOM05D003364 ORTHO05D003795 1.4e-31 140.2 155 55.5
Ah.09g232710 Amaranthus hybridus HOM05D000736 ORTHO05D007313 3.2e-31 139.0 164 51.2
Oeu045244.1 Olea europaea HOM05D003364 ORTHO05D003795 5.5e-31 138.3 127 62.2
Thhalv10017224m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 7.1e-31 137.9 131 61.8
vmacro23001 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 7.1e-31 137.9 106 71.7
arahy.Tifrunner.gnm1.ann1.URL2CG Arachis hypogaea HOM05D003364 ORTHO05D003795 9.3e-31 137.5 133 62.4
HanXRQChr11g0345961 Helianthus annuus HOM05D003364 ORTHO05D003795 9.3e-31 137.5 133 63.2
Os03g0186800 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 9.3e-31 137.5 134 64.2
Carub.0005s1965 Capsella rubella HOM05D003364 ORTHO05D003795 1.6e-30 136.7 163 51.5
Lalb_Chr02g0155361 Lupinus albus HOM05D003364 ORTHO05D003795 1.6e-30 136.7 138 60.1
ClCG10G019650 Citrullus lanatus HOM05D003364 ORTHO05D003795 2.7e-30 136.0 236 41.9
Os03g0572300 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 2.7e-30 136.0 133 63.2
PGSC0003DMG400008590 Solanum tuberosum HOM05D003364 ORTHO05D003795 2.7e-30 136.0 161 50.3
HPP92_020787 Vanilla planifolia HOM05D003364 ORTHO05D003795 4.6e-30 135.2 132 62.1
AT2G36680 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 7.9e-30 134.4 133 60.9
BcaC02g09182 Brassica carinata HOM05D003364 ORTHO05D003795 7.9e-30 134.4 167 50.3
BcaB02g08535 Brassica carinata HOM05D003364 ORTHO05D003795 1.0e-29 134.0 167 50.3
AT3G53120 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 1.8e-29 133.3 163 49.7
Solyc10g085810.2 Solanum lycopersicum HOM05D003364 ORTHO05D003795 1.8e-29 133.3 161 49.7
Sopen10g035210 Solanum pennellii HOM05D003364 ORTHO05D003795 1.8e-29 133.3 161 49.7
TPR.G31682 Trifolium pratense HOM05D003364 ORTHO05D003795 1.8e-29 133.3 133 62.4
Medtr7g102780 Medicago truncatula HOM05D003364 ORTHO05D003795 5.1e-29 131.7 133 60.9
Thhalv10023701m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 6.7e-29 131.3 142 53.5
Oeu031866.1 Olea europaea HOM05D003364 ORTHO05D003795 6.7e-29 131.3 160 50.6
Sp4g18950 Schrenkiella parvula HOM05D003364 ORTHO05D003795 1.9e-28 129.8 131 58.0
A04p06260 Brassica napus HOM05D003364 ORTHO05D003795 7.4e-28 127.9 165 49.7
BolC4t25549H Brassica oleracea HOM05D003364 ORTHO05D003795 7.4e-28 127.9 164 50.0
Thhalv10010721m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 7.4e-28 127.9 161 49.1
BraA04t16331Z Brassica rapa HOM05D003364 ORTHO05D003795 9.6e-28 127.5 166 49.4
CAN.G541.25 Capsicum annuum HOM05D003364 ORTHO05D003795 9.6e-28 127.5 122 63.9
AL4G32860 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 1.3e-27 127.1 130 58.5
BcaC02g11785 Brassica carinata HOM05D003364 ORTHO05D003795 1.6e-27 126.7 139 56.8
BolC4t22777H Brassica oleracea HOM05D003364 ORTHO05D003795 1.6e-27 126.7 139 56.8
SGA_v2.0_scaffold40G15447 Striga asiatica HOM05D003364 ORTHO05D003795 1.6e-27 126.7 114 57.0
SalBow3G4042 Salvia bowleyana HOM05D003364 ORTHO05D003795 2.1e-27 126.3 109 63.3
unitig_22.g5108 Utricularia gibba HOM05D003364 ORTHO05D003795 2.1e-27 126.3 128 56.2
BolC4t22795H Brassica oleracea HOM05D003364 ORTHO05D003795 2.8e-27 125.9 139 55.4
C04p39770 Brassica napus HOM05D003364 ORTHO05D003795 6.2e-27 124.8 133 58.6
CARHR130970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 6.2e-27 124.8 133 56.4
ECA248G1326 Erigeron canadensis HOM05D003364 ORTHO05D003795 6.2e-27 124.8 133 57.9
Solyc10g083780.1 Solanum lycopersicum HOM05D003364 ORTHO05D003795 6.2e-27 124.8 135 57.8
Sopen10g033230 Solanum pennellii HOM05D003364 ORTHO05D003795 6.2e-27 124.8 135 57.8
BcaB02g09341 Brassica carinata HOM05D003364 ORTHO05D003795 1.4e-26 123.6 138 55.1
CARHR162970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 1.4e-26 123.6 165 47.9
BraA05t19876Z Brassica rapa HOM05D003364 ORTHO05D003795 2.4e-26 122.9 130 57.7
SEGI_00976 Sequoiadendron giganteum HOM05D003364 ORTHO05D003795 4.0e-26 122.1 145 51.0
Lsat_1_v5_gn_1_64020 Lactuca sativa HOM05D003364 ORTHO05D003795 1.3e-24 117.1 135 54.8
C04p11370 Brassica napus HOM05D000165 ORTHO05D003795 1.7e-24 116.7 133 56.4
BcaC03g18177 Brassica carinata HOM05D003364 ORTHO05D003795 3.8e-24 115.5 137 54.7
Aa31LG5G21880 Aethionema arabicum HOM05D003364 ORTHO05D003795 5.0e-24 115.2 130 53.8
Zm00001eb401560 Zea mays HOM05D003364 ORTHO05D003795 5.0e-24 115.2 120 57.5
ATR1158G038 Amborella trichopoda HOM05D003364 ORTHO05D003795 1.9e-23 113.2 130 58.5
Carub.0004s1850 Capsella rubella HOM05D003364 ORTHO05D003795 3.2e-23 112.5 132 56.1
Lsat_1_v5_gn_2_100520 Lactuca sativa HOM05D003364 ORTHO05D003795 3.2e-23 112.5 128 58.6
CDE05G1858 Ceratophyllum demersum HOM05D003364 ORTHO05D003795 7.1e-23 111.3 133 52.6
CAN.G729.4 Capsicum annuum HOM05D003364 ORTHO05D003795 9.3e-23 110.9 129 51.9
PSO801G0728 Papaver somniferum HOM05D003364 ORTHO05D003795 1.6e-22 110.2 92 67.4
arahy.Tifrunner.gnm1.ann1.PZQ5IT Arachis hypogaea HOM05D003364 ORTHO05D003795 2.1e-22 109.8 111 60.4
PSO339G5958 Papaver somniferum HOM05D003364 ORTHO05D003795 2.1e-22 109.8 81 72.8
Hma1.2p1_0137F.1_g062430 Hydrangea macrophylla HOM05D003364 ORTHO05D003795 2.7e-22 109.4 100 67.0
A05p09200 Brassica napus HOM05D003364 ORTHO05D003795 3.5e-22 109.0 169 46.7
CDE11G0254 Ceratophyllum demersum HOM05D003364 ORTHO05D003795 3.5e-22 109.0 133 51.1
Lj1g0027813 Lotus japonicus HOM05D003364 ORTHO05D003795 7.9e-22 107.8 71 80.3
CSS0010979 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 6.7e-21 104.8 74 73.0
PGSC0003DMG400028179 Solanum tuberosum HOM05D003364 ORTHO05D003795 5.7e-20 101.7 138 50.0
arahy.Tifrunner.gnm1.ann1.HU14K8 Arachis hypogaea HOM05D003364 ORTHO05D003795 1.3e-19 100.5 133 49.6
arahy.Tifrunner.gnm1.ann1.R92IIS Arachis hypogaea HOM05D003364 ORTHO05D003795 1.3e-19 100.5 133 49.6
Glyma.13G147900 Glycine max HOM05D003364 ORTHO05D003795 2.2e-19 99.8 109 51.4
Glyma.20G077501 Glycine max HOM05D003364 ORTHO05D003795 2.2e-19 99.8 111 56.8
Psat6g124000 Pisum sativum HOM05D003364 ORTHO05D003795 3.7e-19 99.0 164 43.9
SGA_v2.0_scaffold75G24816 Striga asiatica HOM05D003364 ORTHO05D003795 6.3e-19 98.2 133 46.6
PSO063G6171 Papaver somniferum HOM05D003364 ORTHO05D003795 1.4e-18 97.1 138 47.8
PSO339G1192 Papaver somniferum HOM05D003364 ORTHO05D003795 1.8e-18 96.7 138 47.1
Glyma.10G063400 Glycine max HOM05D003364 ORTHO05D003795 4.1e-18 95.5 102 54.9
CSS0013430 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 1.2e-17 94.0 103 52.4
CSS0011074 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 2.6e-17 92.8 76 65.8
Lsat_1_v5_gn_6_28160 Lactuca sativa HOM05D003364 ORTHO05D003795 2.6e-17 92.8 114 49.1
Oeu023984.1 Olea europaea HOM05D003364 ORTHO05D003795 2.6e-17 92.8 149 42.3
HanXRQChr13g0400531 Helianthus annuus HOM05D003364 ORTHO05D003795 5.0e-16 88.6 133 44.4
unitig_8.g4120 Utricularia gibba HOM05D003364 ORTHO05D003795 8.5e-16 87.8 104 52.9
Phvul.007G226100 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 1.4e-15 87.0 65 69.2
Psat6g123960 Pisum sativum HOM05D003364 ORTHO05D003795 3.2e-15 85.9 129 45.0
VMungo0720G0068 Vigna mungo HOM05D003364 ORTHO05D003795 3.2e-15 85.9 92 57.6
Mapoly0070s0080 Marchantia polymorpha HOM05D003364 ORTHO05D003795 4.2e-15 85.5 139 44.6
ECA233G2861 Erigeron canadensis HOM05D003364 ORTHO05D003795 5.5e-15 85.1 120 47.5
MBI19_g12832_MAGBIO Magnolia biondii HOM05D003364 ORTHO05D003795 1.4e-13 80.5 82 54.9
Hma1.2p1_0970F.1_g242720 Hydrangea macrophylla HOM05D003364 ORTHO05D003795 2.0e-12 76.6 77 61.0
DCAR_017656 Daucus carota HOM05D003364 ORTHO05D003795 5.7e-12 75.1 75 62.7
Psat4g136360 Pisum sativum HOM05D001184 ORTHO05D003397 9.7e-12 74.3 99 50.5
CSS0026446 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 1.1e-10 70.9 82 51.2
DCAR_017653 Daucus carota HOM05D003364 ORTHO05D003795 1.1e-10 70.9 83 50.6
Pp3c2_570 Physcomitrium patens HOM05D003364 ORTHO05D003795 1.4e-07 60.5 159 34.0
CBR_g30234 Chara braunii HOM05D003364 ORTHO05D003795 2.5e-07 59.7 117 38.5
SEGI_20987 Sequoiadendron giganteum HOM05D003364 ORTHO05D003795 3.6e-06 55.8 115 39.1
Pp3c14_24180 Physcomitrium patens HOM05D003364 ORTHO05D003795 4.7e-06 55.5 198 30.3
SMO147G0421 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 7.9e-06 54.7 50 56.0


User provided reference genes

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