Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.7e-191 672.5 356 100.0
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.2e-107 394.0 326 68.7
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.4e-95 354.0 353 59.2
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.5e-86 323.9 357 57.4
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 3.4e-86 322.8 357 54.9
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 7.5e-86 321.6 367 55.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.2e-85 320.1 343 58.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.8e-85 318.9 355 57.7
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.4e-84 316.6 344 55.8
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 5.9e-83 312.0 343 56.0
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.7e-82 310.5 284 57.7
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 2.2e-82 310.1 312 59.3
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 6.5e-82 308.5 289 60.2
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.5e-81 307.4 304 58.9
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.5e-81 307.4 363 54.0
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 2.5e-81 306.6 278 61.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 9.4e-81 304.7 285 58.2
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.6e-80 303.9 276 59.8
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 8.0e-80 301.6 361 51.2
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.0e-79 301.2 286 57.3
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.4e-79 300.8 347 54.2
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.4e-79 300.8 292 58.9
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.8e-79 300.4 360 53.6
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 3.0e-79 299.7 293 58.0
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 5.2e-79 298.9 289 59.5
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 6.8e-79 298.5 278 63.3
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.2e-78 297.7 310 54.8
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.0e-78 297.0 375 52.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 2.0e-78 297.0 288 56.6
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 5.7e-78 295.4 295 57.3
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.3e-77 294.3 293 59.0
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.3e-77 294.3 275 57.1
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.8e-77 293.1 298 56.7
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.8e-77 293.1 359 51.5
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 1.4e-76 290.8 336 51.8
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.4e-76 290.8 366 51.4
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.8e-76 290.4 270 57.8
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 3.1e-76 289.7 275 57.1
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 7.0e-76 288.5 359 49.9
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.5e-75 285.8 288 56.9
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 7.7e-75 285.0 300 55.7
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.7e-74 283.9 288 56.6
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 5.0e-74 282.3 265 56.2
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 6.6e-74 282.0 362 50.0
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.1e-73 281.2 346 50.9
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.9e-73 280.4 310 54.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.3e-73 279.6 340 54.7
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 4.3e-73 279.3 275 56.0
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 5.6e-73 278.9 352 48.9
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-72 277.7 317 53.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.2e-72 277.7 374 47.9
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.6e-72 277.3 273 56.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.1e-72 276.9 317 53.9
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 8.0e-72 275.0 220 66.8
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 5.2e-71 272.3 294 53.7
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.2e-70 271.2 359 49.6
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 5.7e-70 268.9 309 52.4
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 7.5e-70 268.5 287 52.3
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 9.8e-70 268.1 286 53.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.9e-69 265.8 354 51.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 4.9e-69 265.8 354 47.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.4e-68 264.2 284 52.1
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.8e-68 263.8 283 55.1
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.4e-68 263.5 264 54.9
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.1e-68 262.7 362 48.6
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 7.0e-68 261.9 274 54.0
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 4.6e-67 259.2 502 37.6
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 5.9e-67 258.8 277 51.3
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 5.9e-67 258.8 311 53.4
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.7e-66 257.3 270 54.1
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.0e-66 256.5 270 54.4
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.0e-66 255.8 376 45.7
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.6e-66 255.0 295 50.5
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.1e-65 254.6 299 51.5
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.5e-65 254.2 294 50.0
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.5e-65 253.4 282 53.2
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.5e-65 253.4 250 56.0
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 5.6e-65 252.3 353 45.9
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.2e-64 251.1 272 59.2
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.8e-64 250.0 276 50.4
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 3.6e-64 249.6 292 49.7
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 6.2e-64 248.8 313 50.5
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.4e-63 247.7 349 47.6
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.8e-63 247.3 285 50.5
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-62 244.6 347 46.7
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.5e-62 244.2 367 44.1
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.6e-62 243.4 271 49.8
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.6e-62 243.4 283 50.2
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.8e-62 242.3 324 48.8
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 7.5e-62 241.9 294 49.3
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.3e-61 241.1 370 44.6
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 6.4e-61 238.8 367 45.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 8.3e-61 238.4 325 47.7
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.1e-60 236.1 279 47.7
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 7.0e-60 235.3 185 67.6
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 9.2e-60 235.0 260 50.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.2e-59 234.6 394 41.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 3.5e-59 233.0 214 59.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 7.8e-59 231.9 290 51.4
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.5e-57 227.6 325 45.2
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 2.1e-56 223.8 351 44.2
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.4e-52 211.1 215 51.6
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 3.5e-51 206.5 240 47.5
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 7.8e-51 205.3 363 39.1
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 8.6e-50 201.8 302 45.0
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.5e-46 191.0 164 61.0
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 5.8e-46 189.1 397 35.5
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 6.4e-45 185.7 274 44.2
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.8e-40 170.2 269 39.0
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 6.0e-35 152.5 226 43.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 2.1e-32 144.1 247 36.8
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 8.1e-32 142.1 287 38.0
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.4e-31 141.4 321 37.1
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-26 124.4 133 54.9
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.3e-26 124.0 291 32.3
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 4.0e-23 113.2 87 66.7
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 3.8e-21 106.7 343 31.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.4e-20 104.8 195 39.0
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.1e-15 88.6 209 38.8
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 2.6e-14 84.0 207 37.7
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-11 75.1 210 30.5
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 2.7e-11 73.9 212 30.2
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.3e-10 70.9 113 38.1


User provided reference genes

Program Settings