Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.9e-143 511.1 263 100.0
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 4.6e-109 398.3 264 78.8
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 4.3e-107 391.7 263 76.4
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.4e-105 386.0 256 77.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-104 383.6 256 76.6
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.6e-104 382.5 264 75.0
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.4e-104 382.1 264 75.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 3.2e-102 375.6 264 74.2
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 7.2e-102 374.4 264 73.1
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 7.2e-102 374.4 252 77.0
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 7.2e-102 374.4 264 73.9
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.2e-101 373.6 257 73.5
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 2.7e-101 372.5 256 72.7
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.7e-101 372.5 252 76.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 3.6e-101 372.1 264 73.1
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 6.1e-101 371.3 276 71.7
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.1e-101 371.3 256 72.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.4e-100 370.2 263 72.6
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.8e-100 369.8 251 75.7
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.3e-100 369.4 244 79.1
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 2.3e-100 369.4 264 71.6
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 3.0e-100 369.0 256 73.0
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.9e-100 368.6 265 72.1
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 5.1e-100 368.2 264 71.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 8.8e-100 367.5 254 73.2
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 8.8e-100 367.5 255 73.3
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 8.8e-100 367.5 255 73.3
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.5e-99 366.7 264 70.8
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.5e-99 366.7 264 70.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.6e-99 365.9 264 71.2
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.6e-99 365.9 264 70.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 3.3e-99 365.5 257 73.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 4.4e-99 365.2 251 73.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 7.4e-99 364.4 255 72.2
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.3e-98 363.6 264 70.5
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.7e-98 363.2 255 72.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.1e-97 360.5 257 71.6
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.1e-97 360.5 264 69.3
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.4e-97 360.1 264 69.3
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 3.1e-97 359.0 264 68.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 4.1e-97 358.6 264 69.7
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.1e-97 358.6 264 69.7
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 6.9e-97 357.8 264 68.2
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 6.9e-97 357.8 264 70.1
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.2e-96 357.1 264 68.6
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.0e-96 356.3 287 67.2
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.6e-96 355.9 254 71.7
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.6e-96 355.9 264 68.9
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.6e-96 355.9 264 68.9
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.6e-96 355.9 264 68.9
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 3.4e-96 355.5 264 67.4
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 3.4e-96 355.5 264 69.7
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 4.5e-96 355.1 270 68.9
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 5.9e-96 354.8 264 70.5
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.9e-96 354.8 264 68.9
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.9e-96 354.8 264 70.8
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.2e-95 352.8 264 68.9
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 2.9e-95 352.4 264 68.6
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 3.8e-95 352.1 265 70.9
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 6.5e-95 351.3 257 68.1
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.1e-94 350.5 264 66.7
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.1e-94 350.5 264 70.1
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.4e-94 350.1 259 70.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.9e-94 349.7 264 66.7
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.9e-94 349.7 257 67.7
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.2e-94 347.8 264 67.4
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.2e-93 347.1 286 64.0
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 2.1e-93 346.3 263 66.5
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 2.7e-93 345.9 255 67.5
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.7e-93 345.1 264 65.5
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.7e-93 345.1 264 65.5
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 6.1e-93 344.7 270 67.4
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.2e-92 341.7 246 69.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.1e-91 340.5 264 67.8
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.6e-91 339.3 261 66.7
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.4e-91 337.8 252 70.6
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 9.7e-91 337.4 247 69.6
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.5e-88 328.9 284 62.0
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.1e-86 323.9 255 66.7
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.5e-86 323.6 305 58.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.2e-86 322.4 232 72.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 9.4e-86 320.9 265 65.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-85 320.5 277 63.9
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.6e-85 318.9 251 65.3
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 3.6e-85 318.9 251 64.9
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.0e-84 317.4 251 64.9
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.8e-84 316.6 192 84.9
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.6e-83 312.8 233 69.5
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 5.7e-83 311.6 264 63.6
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.4e-81 306.2 273 60.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.7e-80 301.2 282 57.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 3.8e-79 298.9 249 62.7
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 6.5e-79 298.1 262 59.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.2e-77 293.9 195 76.9
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 8.0e-77 291.2 195 76.9
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 2.6e-75 286.2 266 62.4
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.7e-74 282.3 306 53.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 3.7e-74 282.3 255 59.6
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.6e-69 266.9 194 72.2
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 3.6e-69 265.8 234 59.4
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 8.0e-69 264.6 266 52.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 5.4e-65 251.9 250 55.6
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 3.3e-62 242.7 191 64.4
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.6e-59 233.0 193 64.8
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 4.4e-59 232.3 183 63.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 2.9e-58 229.6 248 48.8
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.5e-54 216.5 255 45.9
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 5.6e-54 215.3 254 48.8
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-51 206.5 207 53.6
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-51 206.5 207 53.6
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-50 201.4 174 59.2
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 5.6e-46 188.7 123 77.2
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.3e-39 167.5 128 68.8
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.4e-36 156.8 163 52.8
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 2.6e-35 153.3 122 67.2
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.1e-33 146.0 93 81.7
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 2.7e-24 116.7 115 55.7
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.7e-23 114.0 94 57.4
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.9e-22 110.5 84 69.0
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.3e-21 107.8 103 56.3
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.9e-18 95.9 108 55.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 4.2e-17 92.8 55 74.5
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.9e-15 86.3 65 72.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 6.4e-10 68.9 175 29.1
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 3.5e-08 63.2 95 41.1


User provided reference genes

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