Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 1.8e-94 349.4 193 100.0
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 3.4e-77 292.0 178 91.0
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 3.3e-64 248.8 191 77.5
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 1.8e-62 243.0 191 75.4
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 4.1e-62 241.9 190 74.2
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 3.5e-61 238.8 190 75.3
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 1.0e-60 237.3 191 75.4
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 8.5e-60 234.2 193 73.1
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 1.1e-59 233.8 191 72.3
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 2.5e-59 232.6 191 74.9
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 4.4e-56 221.9 192 70.8
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 2.4e-54 216.1 178 72.5
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 4.1e-54 215.3 190 70.0
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 7.0e-54 214.5 190 67.4
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.2e-53 213.8 191 70.7
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 2.0e-53 213.0 191 69.6
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 2.6e-53 212.6 187 71.1
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 3.5e-53 212.2 191 70.2
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 4.5e-53 211.8 190 68.9
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 5.9e-53 211.5 190 66.8
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 7.7e-53 211.1 200 66.5
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 1.0e-52 210.7 205 65.4
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 1.7e-52 209.9 191 69.1
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 1.7e-52 209.9 191 69.1
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 8.5e-52 207.6 191 68.6
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 2.5e-51 206.1 191 68.6
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 2.7e-50 202.6 189 66.1
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 3.0e-49 199.1 187 67.9
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 5.2e-49 198.4 213 62.0
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 2.6e-48 196.1 198 62.1
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 3.4e-48 195.7 191 63.9
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 5.7e-48 194.9 199 61.8
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 2.2e-47 193.0 200 62.5
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.8e-47 191.8 191 62.8
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 1.1e-46 190.7 190 64.7
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 4.1e-46 188.7 191 65.4
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 5.3e-46 188.3 191 62.8
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 5.3e-46 188.3 143 74.1
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 7.0e-46 188.0 191 63.9
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 1.2e-45 187.2 192 59.4
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 3.5e-45 185.7 176 65.3
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 7.7e-45 184.5 179 64.8
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 1.7e-44 183.3 178 65.2
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 2.2e-44 183.0 197 60.9
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 2.9e-44 182.6 178 65.2
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 6.5e-44 181.4 151 72.2
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 5.5e-43 178.3 190 62.6
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 6.1e-42 174.9 186 63.4
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 8.0e-42 174.5 165 64.8
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 3.0e-41 172.6 138 68.8
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 3.0e-41 172.6 138 68.8
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 5.2e-41 171.8 190 60.5
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 6.8e-41 171.4 227 53.3
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 1.5e-40 170.2 169 64.5
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 3.4e-40 169.1 189 59.8
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.7e-40 168.3 142 65.5
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 7.5e-40 167.9 183 61.7
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 2.2e-39 166.4 192 59.4
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 1.1e-38 164.1 191 56.0
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 1.8e-38 163.3 143 67.8
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 7.0e-38 161.4 141 67.4
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 9.1e-38 161.0 190 60.0
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 1.2e-37 160.6 192 58.9
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.2e-37 160.6 157 64.3
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 3.5e-37 159.1 137 67.9
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.7e-36 156.8 125 71.2
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.3e-36 156.4 125 70.4
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 2.9e-36 156.0 194 57.7
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 6.6e-36 154.8 196 56.6
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 8.6e-36 154.5 125 70.4
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 1.9e-35 153.3 190 57.4
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 1.9e-35 153.3 200 55.5
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 2.5e-35 152.9 211 55.9
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 2.1e-34 149.8 221 49.8
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 4.7e-34 148.7 221 49.3
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 4.7e-34 148.7 107 77.6
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 4.7e-34 148.7 189 56.1
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 8.0e-34 147.9 191 53.9
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.4e-33 147.1 151 58.9
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 1.4e-33 147.1 143 62.2
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 3.0e-33 146.0 150 59.3
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 2.0e-32 143.3 200 52.5
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 4.4e-32 142.1 247 47.4
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 1.7e-31 140.2 151 60.3
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.4e-30 137.1 111 70.3
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 2.4e-30 136.3 190 51.1
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 3.2e-30 136.0 209 50.2
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 7.0e-30 134.8 175 53.7
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 3.5e-29 132.5 154 55.2
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 5.9e-29 131.7 189 52.4
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 6.6e-28 128.3 242 45.0
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.1e-27 127.5 191 48.7
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 3.6e-26 122.5 149 53.7
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 6.8e-25 118.2 71 84.5
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 1.2e-24 117.5 152 53.3
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 9.8e-24 114.4 189 46.6
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 1.4e-22 110.5 191 46.1
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 1.4e-22 110.5 191 46.1
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 1.6e-21 107.1 188 44.7
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 7.8e-21 104.8 210 43.3
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 3.9e-20 102.4 329 31.3
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 5.0e-20 102.1 211 42.7
Atru.chr4.2281 Acer truncatum HOM05D000979 ORTHO05D003182 6.6e-20 101.7 98 65.3
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 6.6e-20 101.7 220 41.4
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 8.6e-20 101.3 154 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 1.5e-19 100.5 69 75.4
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 1.2e-18 97.4 191 43.5
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 1.2e-18 97.4 191 43.5
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 2.8e-18 96.3 178 43.3
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 4.7e-18 95.5 140 52.1
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 8.1e-18 94.7 191 43.5
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.8e-17 93.6 190 43.2
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 3.4e-16 89.4 174 42.0
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 3.7e-15 85.9 69 69.6
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 8.3e-15 84.7 61 68.9
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 1.1e-14 84.3 106 52.8
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 3.2e-14 82.8 272 33.8
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 4.1e-14 82.4 184 42.9
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 7.1e-14 81.6 188 39.9
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.1e-13 80.1 93 57.0
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 2.7e-13 79.7 144 43.8
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 2.7e-13 79.7 276 34.1
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 7.8e-13 78.2 213 38.5
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 2.5e-11 73.2 77 61.0
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 1.2e-10 70.9 52 61.5
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 1.2e-10 70.9 52 61.5
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.1e-10 70.1 187 35.8
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 3.6e-10 69.3 46 67.4
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 4.7e-10 68.9 178 37.1
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 1.8e-09 67.0 164 39.0
FAN16G0422 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.1e-09 66.2 120 48.3
Gohir.D08G197400 Gossypium hirsutum HOM05D004913 ORTHO05D006150 9.9e-08 61.2 95 46.3
Cpa.g.c45152 Carica papaya HOM05D004913 ORTHO05D006150 1.7e-07 60.5 88 54.5
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 1.7e-07 60.5 175 34.9
Gorai.007G212000 Gossypium raimondii HOM05D004913 ORTHO05D006150 3.7e-07 59.3 95 46.3
Zm00001eb060940 Zea mays HOM05D004913 ORTHO05D006150 3.7e-07 59.3 59 64.4
Gorai.003G091900 Gossypium raimondii HOM05D004913 ORTHO05D006150 6.4e-07 58.5 95 46.3
Gohir.D03G068600 Gossypium hirsutum HOM05D004913 ORTHO05D006150 3.2e-06 56.2 95 44.2


User provided reference genes

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