Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.7e-194 681.8 343 100.0
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 3.7e-175 618.2 343 90.1
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-172 609.4 343 88.6
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-172 609.4 343 88.6
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.3e-172 609.0 343 90.1
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.0e-172 607.8 343 89.8
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 1.0e-169 600.1 343 88.6
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 1.2e-168 596.7 343 88.0
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.6e-168 595.5 343 88.0
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 4.3e-163 578.2 343 84.8
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 9.5e-163 577.0 344 85.5
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.6e-162 576.2 343 84.5
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 8.0e-162 573.9 344 85.2
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.2e-161 571.2 344 84.3
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 5.2e-161 571.2 343 85.4
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 8.9e-161 570.5 343 83.1
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 7.5e-160 567.4 348 82.5
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 9.8e-160 567.0 343 83.7
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.7e-159 566.2 343 83.4
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-159 566.2 348 82.2
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.7e-159 566.2 343 82.8
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 1.7e-159 566.2 343 82.8
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 2.9e-159 565.5 344 83.4
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 4.9e-159 564.7 343 82.8
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 6.4e-159 564.3 355 81.4
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 6.4e-159 564.3 344 83.1
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 8.3e-159 563.9 347 81.0
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.1e-158 563.5 343 81.9
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 4.1e-158 561.6 345 80.6
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 5.4e-158 561.2 345 81.4
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 5.4e-158 561.2 349 81.7
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 7.0e-158 560.8 353 80.2
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.2e-157 560.1 343 82.8
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.7e-157 558.9 346 81.5
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.8e-157 557.4 346 81.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.3e-156 556.6 345 82.0
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 3.0e-156 555.4 345 81.4
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 3.0e-156 555.4 348 79.9
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 3.9e-156 555.1 346 81.2
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 3.9e-156 555.1 348 79.9
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 3.9e-156 555.1 347 82.1
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.9e-156 555.1 343 81.0
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.1e-156 554.7 345 80.6
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 6.6e-156 554.3 353 80.5
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 8.6e-156 553.9 348 79.6
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 1.5e-155 553.1 364 78.0
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.9e-155 552.7 347 82.4
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 2.5e-155 552.4 343 80.5
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 2.5e-155 552.4 345 80.0
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 5.6e-155 551.2 343 81.9
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 5.6e-155 551.2 347 81.3
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.2e-154 550.1 343 80.8
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.6e-154 549.7 345 80.3
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 2.1e-154 549.3 351 80.9
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.8e-154 548.9 344 80.5
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.6e-154 548.5 330 84.2
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.7e-154 548.1 345 80.0
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 4.7e-154 548.1 353 79.6
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 4.7e-154 548.1 351 79.5
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 6.2e-154 547.7 342 80.4
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 1.4e-153 546.6 345 79.4
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.4e-153 546.6 348 79.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.0e-153 545.0 345 79.4
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 5.2e-153 544.7 342 80.7
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 8.9e-153 543.9 347 78.7
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.6e-152 542.3 346 81.8
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.6e-152 542.3 347 78.4
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 2.6e-152 542.3 345 80.0
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.4e-152 542.0 371 76.0
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.4e-152 542.0 347 78.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 4.4e-152 541.6 359 78.0
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.3e-151 540.0 342 80.4
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 6.4e-151 537.7 351 77.2
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 6.4e-151 537.7 348 80.2
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 8.3e-151 537.3 343 79.0
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.4e-150 536.6 343 79.0
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 2.4e-150 535.8 340 80.3
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 2.4e-150 535.8 343 79.3
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 3.2e-150 535.4 345 78.3
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 7.1e-150 534.3 343 79.3
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 7.1e-150 534.3 363 76.6
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.6e-149 533.1 321 83.5
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 5.1e-148 528.1 344 79.4
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 8.6e-148 527.3 338 79.3
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 3.3e-147 525.4 344 76.7
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 3.3e-147 525.4 344 76.7
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 3.3e-147 525.4 344 76.7
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 5.6e-147 524.6 347 76.9
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 7.3e-147 524.2 343 78.1
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 9.5e-147 523.9 351 75.8
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.2e-146 523.5 345 79.7
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 2.1e-146 522.7 351 75.8
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 6.2e-146 521.2 344 76.5
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 6.2e-146 521.2 344 76.5
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 8.1e-146 520.8 346 76.6
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-145 520.4 348 75.6
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-145 520.4 348 75.6
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-145 520.4 348 75.9
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.4e-145 520.0 346 76.0
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 3.1e-145 518.8 349 75.4
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 4.0e-145 518.5 343 76.1
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.5e-144 516.5 346 74.9
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 2.0e-144 516.2 343 75.5
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 2.0e-144 516.2 354 74.3
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 5.8e-144 514.6 355 73.8
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 5.8e-144 514.6 353 73.7
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 4.2e-142 508.4 354 73.2
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 7.1e-142 507.7 343 73.8
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 9.2e-142 507.3 344 75.3
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 1.7e-140 503.1 364 71.2
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 3.9e-140 501.9 344 73.8
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.1e-140 501.5 301 83.1
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 5.6e-139 498.0 384 69.0
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.6e-138 495.4 346 76.9
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.4e-137 492.7 343 74.9
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.9e-134 483.0 343 73.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 7.1e-134 481.1 343 73.5
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.2e-133 480.3 345 70.1
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 1.6e-133 479.9 348 71.8
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 5.1e-132 474.9 344 70.1
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.5e-131 472.6 347 70.3
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.5e-131 472.6 347 70.3
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 3.1e-129 465.7 323 74.6
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 2.0e-128 463.0 347 68.0
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 2.6e-128 462.6 348 68.1
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.2e-127 459.5 343 66.5
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 2.9e-127 459.1 348 66.7
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 6.4e-127 458.0 266 86.1
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 6.4e-127 458.0 266 86.1
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.4e-126 456.8 340 65.3
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 1.2e-125 453.8 344 69.2
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.9e-124 448.7 334 66.2
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.5e-120 436.8 319 66.1
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 5.1e-116 421.8 273 78.4
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.9e-115 419.9 319 64.3
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.6e-112 409.5 324 62.3
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 7.1e-110 401.4 319 62.1
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.5e-107 392.9 230 83.0
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.3e-100 369.8 229 78.2
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 9.7e-99 364.4 255 71.4
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 4.2e-94 349.0 199 84.9
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.2e-85 320.9 215 76.3
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.6e-83 313.2 298 54.7
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.7e-79 300.4 245 64.5
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 5.9e-72 275.4 185 78.4
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.8e-68 261.5 182 67.0
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.8e-68 261.5 182 67.0
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.5e-59 234.2 165 68.5
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 7.0e-57 225.3 137 80.3
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 7.0e-57 225.3 123 90.2
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 9.2e-57 224.9 131 84.0
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.6e-54 215.7 122 81.1
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.1e-45 187.2 164 61.0
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.6e-45 186.4 164 61.0
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 4.4e-43 179.5 164 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.5e-38 163.7 128 61.7
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 9.9e-35 151.8 182 48.9
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 9.6e-30 135.2 118 65.3
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 6.8e-28 129.0 70 90.0
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 5.8e-27 125.9 92 72.8
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 2.1e-24 117.5 92 67.4
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 4.8e-21 106.3 78 66.7
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 7.6e-19 99.0 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.3e-17 92.0 118 43.2
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 5.1e-15 86.3 78 56.4
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.8e-13 79.7 146 41.1
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 2.1e-08 64.3 98 45.9
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 2.7e-08 63.9 50 64.0
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 3.9e-07 60.1 36 69.4


User provided reference genes

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