Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 6.6e-97 357.5 190 100.0
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 4.3e-32 142.1 87 85.1
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 7.4e-32 141.4 84 89.3
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 1.1e-30 137.5 89 80.9
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 3.1e-30 136.0 95 74.7
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 4.1e-30 135.6 84 85.7
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 4.1e-30 135.6 84 84.5
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 5.3e-30 135.2 88 78.4
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 5.3e-30 135.2 83 86.7
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.2e-29 134.0 126 62.7
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.5e-29 133.7 84 83.3
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.5e-29 133.7 115 61.7
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 2.6e-29 132.9 102 68.6
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 2.6e-29 132.9 102 68.6
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 2.6e-29 132.9 102 68.6
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 5.9e-29 131.7 126 62.7
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 5.9e-29 131.7 128 62.5
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 7.6e-29 131.3 88 78.4
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 7.6e-29 131.3 87 79.3
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.0e-28 131.0 84 83.3
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 2.2e-28 129.8 84 81.0
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 2.9e-28 129.4 88 71.6
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 5.0e-28 128.6 85 77.6
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 8.4e-28 127.9 85 71.8
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 8.4e-28 127.9 85 70.6
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.1e-27 127.5 88 76.1
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.1e-27 127.5 88 76.1
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 1.1e-27 127.5 84 78.6
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 1.1e-27 127.5 85 81.2
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 1.4e-27 127.1 83 79.5
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 2.5e-27 126.3 125 60.8
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 4.2e-27 125.6 84 79.8
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 5.5e-27 125.2 85 71.8
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 5.5e-27 125.2 89 79.8
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 7.2e-27 124.8 85 74.1
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 9.3e-27 124.4 83 79.5
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 9.3e-27 124.4 86 77.9
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.6e-26 123.6 83 80.7
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.1e-26 123.2 83 77.1
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 2.1e-26 123.2 83 72.3
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.1e-26 123.2 83 77.1
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 2.1e-26 123.2 89 75.3
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 2.1e-26 123.2 89 75.3
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.7e-26 122.9 85 80.0
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.7e-26 122.9 85 80.0
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 2.7e-26 122.9 85 78.8
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 3.5e-26 122.5 92 75.0
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 3.5e-26 122.5 85 70.6
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.6e-26 122.1 85 69.4
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.6e-26 122.1 85 74.1
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 6.1e-26 121.7 85 75.3
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.0e-25 120.9 83 77.1
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.3e-25 120.6 94 74.5
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 1.8e-25 120.2 92 73.9
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 1.8e-25 120.2 126 57.9
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 2.3e-25 119.8 101 64.4
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 3.9e-25 119.0 90 74.4
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 5.1e-25 118.6 85 75.3
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 5.1e-25 118.6 88 75.0
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.1e-24 117.5 85 70.6
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 1.1e-24 117.5 86 75.6
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 1.5e-24 117.1 81 74.1
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.9e-24 116.7 87 69.0
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.5e-24 116.3 87 69.0
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.5e-24 116.3 85 70.6
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 4.3e-24 115.5 91 63.7
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.3e-23 114.0 92 68.5
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 1.6e-23 113.6 81 66.7
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 2.2e-23 113.2 85 65.9
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 6.3e-23 111.7 84 71.4
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 6.3e-23 111.7 77 77.9
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 1.1e-22 110.9 83 73.5
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 4.1e-22 109.0 88 68.2
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 6.9e-22 108.2 124 57.3
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.2e-21 107.5 138 50.0
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 5.9e-21 105.1 96 61.5
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 3.8e-20 102.4 97 63.9
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 5.0e-20 102.1 84 69.0
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 6.5e-20 101.7 82 69.5
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 8.5e-20 101.3 83 71.1
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 8.5e-20 101.3 83 71.1
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 8.5e-20 101.3 83 71.1
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 1.1e-19 100.9 59 79.7
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 1.1e-19 100.9 53 86.8
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.1e-19 100.9 126 53.2
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 1.4e-19 100.5 59 81.4
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.4e-19 100.5 79 73.4
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.4e-19 100.5 79 73.4
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 1.9e-19 100.1 85 68.2
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 1.9e-19 100.1 53 86.8
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.5e-19 99.8 56 82.1
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 3.2e-19 99.4 81 71.6
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 4.2e-19 99.0 53 84.9
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 1.2e-18 97.4 53 83.0
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 1.6e-18 97.1 51 86.3
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 2.1e-18 96.7 53 83.0
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 2.1e-18 96.7 52 82.7
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 2.7e-18 96.3 56 78.6
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 3.6e-18 95.9 52 82.7
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 3.6e-18 95.9 53 81.1
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 3.6e-18 95.9 52 82.7
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 3.6e-18 95.9 52 82.7
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 3.6e-18 95.9 53 83.0
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 6.1e-18 95.1 62 72.6
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 8.8e-17 91.3 52 80.8
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 8.8e-17 91.3 52 80.8
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 8.8e-17 91.3 52 80.8
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 8.8e-17 91.3 52 80.8
ATR0693G087 Amborella trichopoda HOM05D005421 ORTHO05D026565 2.0e-16 90.1 66 80.3
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 2.0e-16 90.1 52 76.9
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 3.3e-16 89.4 96 57.3
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 4.3e-16 89.0 66 71.2
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 9.7e-16 87.8 94 54.3
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.1e-14 84.3 106 55.7
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 3.1e-14 82.8 75 57.3
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 4.1e-14 82.4 77 57.1
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 9.1e-14 81.3 52 73.1
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 1.0e-12 77.8 98 44.9
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.0e-12 77.8 77 51.9
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 1.7e-12 77.0 52 69.2
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 4.2e-11 72.4 97 49.5
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 2.1e-10 70.1 52 55.8
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 5.7e-08 62.0 32 81.2
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 5.7e-08 62.0 72 47.2
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 7.4e-08 61.6 36 77.8
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.2e-07 60.1 33 81.8
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 6.3e-07 58.5 30 86.7
CSS0031576 Camellia sinensis var. sinensis HOM05D032561 ORTHO05D030857 7.0e-06 55.1 46 63.0
CSS0038730 Camellia sinensis var. sinensis HOM05D032561 ORTHO05D030857 7.0e-06 55.1 46 63.0


User provided reference genes

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