Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.3e-184 647.5 319 100.0
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 3.4e-98 362.5 241 73.9
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 4.2e-96 355.5 232 75.4
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.2e-95 354.0 249 70.7
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.8e-94 350.1 247 70.0
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 8.7e-94 347.8 242 71.1
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.5e-93 346.3 247 68.4
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.6e-92 343.6 243 67.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.1e-92 343.2 230 72.6
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 6.2e-92 341.7 250 67.6
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.4e-91 339.7 217 73.7
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.2e-90 337.4 229 69.4
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.2e-90 337.4 252 65.1
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.5e-90 337.0 212 73.6
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.6e-90 336.3 250 66.4
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 3.8e-89 332.4 245 66.5
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 8.4e-89 331.3 224 72.8
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 8.4e-89 331.3 260 65.0
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.1e-88 330.9 246 68.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.1e-88 330.9 191 81.2
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 2.5e-88 329.7 211 73.5
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.5e-88 329.7 250 65.6
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.2e-88 329.3 224 71.0
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 7.9e-87 324.7 244 66.8
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 7.9e-87 324.7 252 66.3
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 1.0e-86 324.3 250 66.4
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.8e-86 323.6 219 69.4
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 2.3e-86 323.2 254 62.6
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 3.0e-86 322.8 226 68.1
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 8.7e-86 321.2 228 66.7
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.9e-85 320.1 255 61.2
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 1.9e-85 320.1 256 62.5
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.5e-85 319.7 256 62.5
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.3e-85 319.3 236 68.2
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 5.7e-85 318.5 219 68.5
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 9.7e-85 317.8 219 69.9
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.3e-84 317.4 226 68.1
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.6e-84 317.0 242 64.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 2.2e-84 316.6 220 67.3
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 2.2e-84 316.6 263 60.8
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.8e-84 316.2 265 63.0
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 3.7e-84 315.8 244 63.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.8e-84 315.5 208 71.2
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.8e-84 315.5 208 71.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 8.2e-84 314.7 217 67.7
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.8e-83 313.5 218 67.4
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 3.1e-83 312.8 248 61.3
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 5.3e-83 312.0 211 69.2
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 5.3e-83 312.0 217 66.4
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 5.3e-83 312.0 214 67.3
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 6.9e-83 311.6 216 65.3
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.6e-82 309.7 247 62.8
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 2.6e-82 309.7 219 66.2
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 5.9e-82 308.5 220 66.4
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 5.9e-82 308.5 221 65.6
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.1e-80 304.3 217 66.4
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 4.2e-80 302.4 195 76.4
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 5.5e-80 302.0 233 62.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 7.2e-80 301.6 209 70.8
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 9.4e-80 301.2 229 63.8
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 7.9e-79 298.1 212 66.0
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.4e-78 297.4 214 69.2
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 3.0e-78 296.2 216 65.7
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 3.9e-78 295.8 271 55.4
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 7.4e-77 291.6 230 60.9
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.2e-74 284.3 217 64.1
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 5.9e-74 282.0 203 67.0
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 7.7e-74 281.6 205 62.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 5.5e-72 275.4 189 69.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 9.4e-72 274.6 185 71.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 2.1e-71 273.5 200 64.0
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 3.6e-71 272.7 217 60.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 8.8e-70 268.1 240 60.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 2.6e-66 256.5 196 60.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 2.1e-63 246.9 199 58.3
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 4.0e-62 242.7 204 55.9
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 4.4e-61 239.2 247 51.8
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 9.7e-61 238.0 249 52.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 2.7e-58 229.9 159 66.7
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 4.2e-56 222.6 198 55.1
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 4.2e-56 222.6 208 57.7
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 4.7e-55 219.2 133 78.2
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.4e-45 186.0 137 66.4
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.2e-44 183.7 217 46.1
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 5.9e-42 175.6 105 74.3
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.0e-38 162.9 169 53.8
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 4.0e-38 162.9 124 67.7
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 4.9e-36 156.0 109 71.6
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.1e-31 140.6 143 51.0
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.2e-29 134.8 80 77.5
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 4.1e-27 126.3 209 36.4
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 5.4e-27 125.9 145 50.3
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 7.0e-27 125.6 102 57.8
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.8e-14 84.3 58 65.5
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 1.6e-10 71.2 112 37.5


User provided reference genes

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