Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.9e-170 602.4 304 100.0
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 6.3e-142 507.7 303 85.5
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 5.1e-136 488.0 310 81.0
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 6.7e-136 487.6 310 81.0
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.7e-134 483.0 302 84.1
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 4.8e-134 481.5 309 79.6
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 7.0e-133 477.6 297 81.5
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.0e-132 476.1 310 79.4
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 2.6e-132 475.7 312 78.8
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 4.2e-130 468.4 308 77.6
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 4.2e-130 468.4 310 79.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 5.5e-130 468.0 307 79.5
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 5.5e-130 468.0 307 77.9
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 1.2e-129 466.8 310 80.0
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 1.2e-129 466.8 305 78.7
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.2e-129 466.8 308 78.9
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.6e-129 466.5 298 80.5
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 2.7e-129 465.7 310 79.4
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.0e-128 463.8 309 79.3
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.0e-128 463.8 308 76.6
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.0e-128 463.8 309 79.3
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.8e-128 463.0 311 78.1
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.3e-128 462.6 308 78.6
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 5.2e-128 461.5 309 77.3
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 8.8e-128 460.7 308 76.3
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 4.4e-127 458.4 300 77.7
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 9.7e-127 457.2 308 78.2
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.2e-126 456.1 312 76.6
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 6.3e-126 454.5 262 83.6
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 1.1e-125 453.8 263 85.6
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.1e-125 453.8 303 77.2
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 4.1e-125 451.8 311 76.5
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 5.3e-125 451.4 304 75.0
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 5.3e-125 451.4 268 82.1
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 7.0e-125 451.1 264 85.6
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 9.1e-125 450.7 309 75.1
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 9.1e-125 450.7 296 79.1
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 2.0e-124 449.5 305 74.8
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 1.3e-123 446.8 279 83.5
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 2.9e-123 445.7 303 76.6
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 6.5e-123 444.5 290 78.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.5e-122 443.4 307 74.6
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 3.2e-122 442.2 264 83.3
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 4.2e-122 441.8 264 83.0
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 5.5e-122 441.4 264 83.0
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 5.5e-122 441.4 305 74.4
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 7.2e-122 441.0 309 74.8
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 9.4e-122 440.7 295 75.6
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 2.1e-121 439.5 307 75.2
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.7e-121 439.1 309 74.1
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 3.6e-121 438.7 305 74.8
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 6.1e-121 438.0 306 73.2
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 6.1e-121 438.0 309 74.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.0e-120 437.2 256 84.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 4.0e-120 435.3 303 74.9
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.5e-119 433.3 266 82.0
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.7e-118 429.9 263 81.0
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.1e-117 427.2 279 75.6
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 1.4e-117 426.8 260 81.5
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.8e-117 426.4 308 74.0
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 7.0e-117 424.5 351 66.1
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 2.7e-116 422.5 308 71.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.7e-115 419.9 291 72.9
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.2e-115 419.5 255 80.4
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.9e-114 416.4 259 80.7
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.5e-114 416.0 246 82.1
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 4.2e-114 415.2 244 84.4
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.1e-113 412.9 241 86.3
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.0e-112 408.7 307 69.4
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 4.8e-110 401.7 324 71.0
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.4e-109 400.2 264 78.0
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 7.0e-109 397.9 299 70.2
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.6e-108 396.7 236 85.6
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 6.6e-107 391.3 220 88.6
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.9e-106 389.8 301 68.1
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.5e-106 389.4 300 67.7
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.6e-105 386.7 300 66.7
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.6e-105 386.7 303 68.0
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 2.8e-105 386.0 300 66.3
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 4.0e-104 382.1 299 68.2
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 5.2e-104 381.7 303 68.0
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 5.2e-104 381.7 303 68.0
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 6.8e-104 381.3 305 68.2
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 6.8e-104 381.3 303 67.0
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.0e-103 379.8 305 67.9
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 7.5e-103 377.9 302 67.5
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.7e-102 376.7 306 65.7
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.7e-102 376.7 306 65.7
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.8e-101 373.2 303 67.3
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 3.2e-101 372.5 303 67.3
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.4e-101 371.7 262 75.2
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.5e-100 369.0 257 79.0
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 3.5e-100 369.0 339 62.5
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 5.6e-98 361.7 218 83.0
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 5.6e-98 361.7 259 68.7
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 5.6e-98 361.7 247 70.9
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.8e-97 359.4 254 75.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.3e-96 356.3 253 75.1
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.2e-95 354.0 243 76.5
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.2e-95 354.0 223 79.8
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 9.8e-95 350.9 242 78.1
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 3.2e-93 345.9 303 63.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.8e-88 330.1 250 68.4
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 9.8e-87 324.3 252 64.7
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.3e-86 323.9 181 89.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.9e-85 320.1 217 75.6
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 7.1e-85 318.2 304 59.2
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.1e-82 310.8 243 63.8
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.3e-82 309.3 308 59.1
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 5.1e-75 285.4 178 81.5
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 8.9e-72 274.6 240 59.2
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.3e-67 260.8 247 58.7
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.6e-57 227.3 130 86.2
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.7e-54 217.2 294 44.9
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 6.5e-46 188.7 116 76.7
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 8.2e-41 171.8 112 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 5.3e-40 169.1 117 68.4
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 6.5e-38 162.2 95 80.0
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 7.2e-37 158.7 88 86.4
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 6.5e-30 135.6 90 71.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.5e-30 135.2 78 84.6
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.0e-11 75.1 64 64.1
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 1.1e-10 71.6 44 75.0
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 1.7e-09 67.8 46 69.6
Nn7g37440 Nelumbo nucifera HOM05D006330 ORTHO05D008013 2.2e-09 67.4 41 78.0


User provided reference genes

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