Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0625 Trochodendron aralioides HOM05D004611 ORTHO05D005794 8.7e-154 547.0 284 100.0
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 1.9e-87 326.6 217 75.6
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 3.3e-84 315.8 221 75.6
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 3.1e-82 309.3 218 74.8
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.2e-81 307.4 224 72.8
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 5.8e-81 305.1 220 74.5
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 3.7e-80 302.4 216 75.0
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 1.9e-79 300.1 221 72.9
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 1.2e-78 297.4 221 72.9
PGSC0003DMG402001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.7e-77 293.5 223 69.1
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 3.0e-77 292.7 221 70.6
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 3.9e-77 292.4 223 70.0
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 8.6e-77 291.2 218 72.0
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 1.1e-76 290.8 221 69.7
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 1.5e-76 290.4 223 68.6
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.5e-76 290.4 217 72.4
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 2.5e-76 289.7 223 68.2
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 2.5e-76 289.7 218 70.2
Solyc01g057840.3 Solanum lycopersicum HOM05D004611 ORTHO05D005794 2.5e-76 289.7 223 69.1
Sopen01g023170 Solanum pennellii HOM05D004611 ORTHO05D005794 2.5e-76 289.7 223 67.7
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 3.3e-76 289.3 217 70.0
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 3.3e-76 289.3 223 71.3
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 1.6e-75 287.0 222 68.9
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 4.7e-75 285.4 221 70.1
Peaxi162Scf00126g01512 Petunia axillaris HOM05D004611 ORTHO05D005794 1.4e-74 283.9 200 72.5
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 1.8e-74 283.5 221 69.7
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 1.8e-74 283.5 222 69.8
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 2.3e-74 283.1 219 70.8
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 2.3e-74 283.1 221 70.6
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 5.2e-74 282.0 222 68.9
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 6.8e-74 281.6 221 70.6
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 8.9e-74 281.2 197 73.1
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 1.2e-73 280.8 222 67.6
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 2.0e-73 280.0 221 71.0
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.4e-73 279.3 221 71.5
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.4e-73 279.3 221 71.5
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 4.4e-73 278.9 211 70.6
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 4.4e-73 278.9 212 70.8
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 7.6e-73 278.1 217 69.6
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 9.9e-73 277.7 217 67.7
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 1.3e-72 277.3 221 69.2
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 2.2e-72 276.6 225 69.8
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 2.2e-72 276.6 221 69.2
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 1.1e-71 274.2 221 68.3
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 1.4e-71 273.9 221 68.3
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 1.4e-71 273.9 221 67.4
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 1.9e-71 273.5 221 66.5
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 1.9e-71 273.5 218 69.3
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 4.1e-71 272.3 218 67.9
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 5.4e-71 271.9 217 67.7
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 5.4e-71 271.9 221 67.0
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 7.1e-71 271.6 228 67.5
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 7.1e-71 271.6 221 65.6
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 9.2e-71 271.2 221 67.0
Oeu045271.1 Olea europaea HOM05D004611 ORTHO05D005794 1.2e-70 270.8 221 67.0
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 1.6e-70 270.4 228 68.0
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 1.6e-70 270.4 222 68.0
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 2.7e-70 269.6 217 68.2
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 3.5e-70 269.2 222 67.1
CDE02G2799 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 6.0e-70 268.5 216 65.7
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 1.0e-69 267.7 220 67.3
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 1.7e-69 266.9 224 66.1
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 1.7e-69 266.9 221 66.5
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 2.3e-69 266.5 216 67.6
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 3.0e-69 266.2 221 64.3
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 5.1e-69 265.4 226 65.5
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 8.6e-69 264.6 214 67.3
Cpa.g.sc146.70 Carica papaya HOM05D004611 ORTHO05D005794 1.1e-68 264.2 193 73.6
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 4.3e-68 262.3 216 67.1
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 4.3e-68 262.3 218 67.4
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 1.2e-67 260.8 216 68.5
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 2.1e-67 260.0 218 65.6
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 2.8e-67 259.6 223 65.5
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 1.1e-66 257.7 208 63.9
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 8.9e-66 254.6 219 64.8
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 1.5e-65 253.8 221 63.8
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 3.4e-65 252.7 214 62.6
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 5.8e-65 251.9 217 62.7
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 1.3e-64 250.8 214 65.0
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.3e-64 250.8 214 65.0
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 1.7e-64 250.4 217 63.1
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 2.9e-64 249.6 221 62.4
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 6.4e-64 248.4 223 63.2
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 8.4e-64 248.1 217 63.1
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 1.1e-63 247.7 217 62.2
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 1.4e-63 247.3 217 62.7
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 1.9e-63 246.9 217 61.3
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 1.9e-63 246.9 217 61.3
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 1.9e-63 246.9 217 61.3
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 2.4e-63 246.5 217 60.8
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 2.4e-63 246.5 217 60.8
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 3.2e-63 246.1 217 62.7
unitig_746.g26902 Utricularia gibba HOM05D004611 ORTHO05D005794 7.3e-60 235.0 214 59.8
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.6e-59 233.8 221 60.2
Oeu046590.2 Olea europaea HOM05D004611 ORTHO05D005794 4.0e-58 229.2 190 66.8
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 3.8e-56 222.6 179 65.4
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 1.7e-53 213.8 116 91.4
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 2.6e-49 199.9 220 52.7
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 3.7e-43 179.5 263 44.1
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 8.1e-43 178.3 250 43.2
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 1.2e-41 174.5 247 40.9
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 6.0e-38 162.2 224 45.1
SEGI_12646 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 1.5e-33 147.5 159 49.7
SMO356G0656 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 5.0e-32 142.5 120 61.7
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.8e-29 134.0 140 56.4
SMO356G0045 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 7.4e-28 128.6 156 45.5
CANSAT35G0087 Cannabis sativa HOM05D004611 ORTHO05D005794 3.7e-27 126.3 129 56.6
TPR.G31403 Trifolium pratense HOM05D004611 ORTHO05D005794 1.5e-25 120.9 71 85.9
HanXRQChr06g0164931 Helianthus annuus HOM05D004611 ORTHO05D005794 9.4e-23 111.7 85 67.1
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 3.0e-21 106.7 112 49.1
HanXRQChr04g0096671 Helianthus annuus HOM05D004611 ORTHO05D005794 3.9e-21 106.3 73 74.0
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 1.1e-18 98.2 134 41.8
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 5.0e-08 62.8 75 41.3
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 2.7e-06 57.0 137 29.9


User provided reference genes

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