Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.6e-174 615.9 301 100.0
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 2.4e-141 505.8 304 80.9
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 3.5e-137 491.9 303 78.9
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 5.6e-135 484.6 300 78.0
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 8.1e-134 480.7 303 75.2
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 1.4e-130 469.9 303 75.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.4e-130 469.2 299 73.6
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 7.1e-130 467.6 309 72.8
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 2.1e-129 466.1 303 73.3
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.1e-129 466.1 302 73.8
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 2.7e-129 465.7 300 74.0
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 6.0e-129 464.5 288 75.3
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.9e-127 459.5 300 72.7
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 4.3e-127 458.4 306 73.2
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 9.6e-127 457.2 300 72.3
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 2.1e-126 456.1 313 72.2
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 8.2e-126 454.1 317 71.0
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 2.4e-125 452.6 309 70.6
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 4.0e-125 451.8 304 72.7
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 9.0e-125 450.7 300 71.0
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 9.0e-125 450.7 294 71.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 2.0e-124 449.5 294 70.7
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 1.0e-123 447.2 297 71.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.8e-123 445.3 300 70.0
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 4.9e-123 444.9 298 68.8
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 6.5e-123 444.5 302 72.2
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 6.5e-123 444.5 294 69.7
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.1e-122 443.7 294 69.7
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 1.4e-122 443.4 297 70.0
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.4e-122 443.4 294 69.7
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.9e-122 443.0 295 69.8
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 3.2e-122 442.2 305 69.8
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 7.1e-122 441.0 303 67.7
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.2e-121 440.3 305 69.2
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.6e-121 439.9 296 70.3
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 2.1e-121 439.5 306 68.6
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 2.1e-121 439.5 300 69.7
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 2.7e-121 439.1 294 69.7
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 3.5e-121 438.7 304 68.4
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 4.6e-121 438.3 306 68.3
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 6.0e-121 438.0 303 68.3
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 6.0e-121 438.0 304 68.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.0e-121 438.0 292 70.5
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 1.0e-120 437.2 306 67.6
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.3e-120 436.8 302 68.9
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 2.3e-120 436.0 291 71.5
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.0e-120 435.6 299 70.2
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 3.9e-120 435.3 306 66.7
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 3.9e-120 435.3 304 68.8
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 5.1e-120 434.9 293 70.6
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 6.7e-120 434.5 302 68.2
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 8.7e-120 434.1 300 69.7
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 5.7e-119 431.4 293 68.9
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 7.4e-119 431.0 306 66.7
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 9.7e-119 430.6 302 67.5
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 9.7e-119 430.6 300 67.3
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 1.3e-118 430.3 306 66.0
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 3.7e-118 428.7 297 67.3
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 6.3e-118 427.9 293 69.3
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 8.2e-118 427.6 295 68.8
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 1.4e-117 426.8 301 68.8
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.8e-117 426.4 305 68.9
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 3.1e-117 425.6 295 67.8
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.5e-116 423.3 298 65.4
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 2.6e-116 422.5 293 66.6
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 3.4e-116 422.2 301 66.4
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 5.9e-116 421.4 301 65.1
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.7e-115 419.9 307 64.5
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 2.2e-115 419.5 296 66.2
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 3.8e-115 418.7 243 83.1
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 3.8e-115 418.7 292 68.5
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 3.2e-114 415.6 294 67.7
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 5.5e-114 414.8 307 65.5
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 9.3e-114 414.1 305 65.2
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 9.3e-114 414.1 297 65.7
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 1.6e-113 413.3 291 66.3
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.8e-112 409.8 295 66.4
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 1.3e-110 403.7 296 64.5
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.1e-109 398.7 298 63.8
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 1.4e-106 390.2 304 65.1
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.0e-104 384.0 303 62.4
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 8.8e-104 380.9 306 61.4
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.0e-99 367.5 285 63.5
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 2.2e-99 366.3 300 58.7
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 4.4e-95 352.1 304 59.2
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.4e-93 347.1 247 66.0
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 3.1e-93 345.9 229 69.9
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 5.5e-90 335.1 237 68.8
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.6e-89 333.6 236 68.6
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 4.1e-85 318.9 418 43.1
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.6e-84 317.0 295 54.9
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.9e-83 312.8 271 56.8
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 6.1e-81 305.1 260 59.6
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.2e-79 300.8 207 70.0
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 8.3e-78 294.7 233 63.9
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.1e-74 284.3 191 69.1
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.8e-73 279.6 297 48.8
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.8e-68 261.5 288 49.3
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.1e-65 251.9 198 59.6
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 1.8e-64 250.4 165 69.7
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.9e-62 242.3 254 52.4
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 3.2e-61 239.6 190 64.2
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 9.5e-58 228.0 181 59.1
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.6e-57 227.3 285 46.0
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 6.2e-57 225.3 139 78.4
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.4e-55 219.2 162 64.2
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 2.2e-54 216.9 130 76.9
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 2.7e-52 209.9 173 59.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.0e-51 208.0 131 71.8
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 1.0e-51 208.0 131 71.8
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 1.0e-51 208.0 131 71.8
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 1.1e-48 198.0 165 60.6
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 3.2e-45 186.4 127 66.1
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.1e-44 183.7 102 78.4
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.0e-43 179.9 162 59.3
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 1.1e-40 171.4 123 70.7
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.2e-37 159.8 102 79.4
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.2e-36 157.9 101 77.2
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-36 156.8 101 76.2
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-36 156.8 101 76.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 6.0e-36 155.6 128 59.4
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 3.6e-33 146.4 101 70.3
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.1e-32 143.3 86 81.4
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.4e-24 117.9 88 64.8
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 2.0e-23 114.0 166 41.6
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.7e-19 98.6 52 88.5
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 2.8e-17 93.6 71 66.2
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 1.1e-16 91.7 159 34.0
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.8e-16 90.9 55 83.6
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 4.8e-09 66.2 68 51.5
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 2.4e-08 63.9 68 50.0
FvH4_1g21970 Fragaria vesca HOM05D010020 ORTHO05D015123 2.9e-06 57.0 128 36.7
FAN19G2556 Fragaria x ananassa HOM05D010020 ORTHO05D015123 2.9e-06 57.0 128 36.7


User provided reference genes

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