Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.8e-191 671.8 342 100.0
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.3e-172 609.8 343 89.5
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.0e-172 607.8 343 90.1
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.1e-166 588.6 343 86.6
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.1e-166 588.6 343 86.6
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 2.7e-165 585.5 343 87.5
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 2.3e-164 582.4 343 86.0
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 8.6e-164 580.5 343 86.6
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 4.7e-162 574.7 343 86.0
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 7.5e-160 567.4 343 83.4
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 2.9e-159 565.5 344 84.9
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 3.5e-157 558.5 343 81.9
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 5.9e-157 557.8 347 80.4
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.7e-156 556.2 343 82.2
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-156 556.2 348 80.7
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 5.0e-156 554.7 348 80.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 8.6e-156 553.9 343 81.6
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 2.5e-155 552.4 344 82.6
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.5e-155 552.4 343 81.3
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 3.3e-155 552.0 355 79.2
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.3e-155 552.0 343 80.8
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 4.3e-155 551.6 344 82.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.6e-154 549.7 343 81.9
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.8e-154 548.9 344 80.8
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 3.6e-154 548.5 343 80.8
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 3.6e-154 548.5 344 80.8
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 6.2e-154 547.7 364 78.6
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 6.2e-154 547.7 353 79.6
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.1e-153 547.0 343 81.6
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 1.4e-153 546.6 344 80.8
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.8e-153 546.2 348 78.7
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.3e-153 545.8 343 80.2
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 3.1e-153 545.4 349 79.7
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 4.0e-153 545.0 348 78.4
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 4.0e-153 545.0 345 78.6
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 6.8e-153 544.3 343 81.6
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.2e-152 543.5 348 81.6
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.2e-152 543.5 346 80.3
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.2e-152 543.5 348 78.4
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 1.5e-152 543.1 345 79.4
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 1.5e-152 543.1 347 80.7
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 2.0e-152 542.7 345 78.8
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.0e-152 542.7 346 80.6
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 3.4e-152 542.0 345 80.6
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 4.4e-152 541.6 346 80.3
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 7.5e-152 540.8 343 79.3
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 9.8e-152 540.4 345 78.6
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.8e-152 540.4 348 79.6
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.7e-151 539.7 343 79.9
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 1.7e-151 539.7 342 79.8
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 2.9e-151 538.9 353 78.2
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 2.9e-151 538.9 359 77.4
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.7e-151 538.5 318 85.5
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 3.7e-151 538.5 351 79.5
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 8.3e-151 537.3 343 79.6
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.9e-150 536.2 342 80.1
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 2.4e-150 535.8 350 79.7
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 4.1e-150 535.0 345 78.3
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 5.4e-150 534.6 343 79.9
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 5.4e-150 534.6 345 78.6
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 7.0e-150 534.3 345 78.8
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.2e-149 533.5 342 80.1
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.6e-149 533.1 345 78.3
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.6e-149 533.1 348 78.4
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 6.0e-149 531.2 351 76.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.3e-148 530.0 345 77.7
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.7e-148 529.6 348 77.9
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.0e-148 528.9 348 77.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 3.0e-148 528.9 348 79.0
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 3.0e-148 528.9 353 77.1
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.0e-148 528.1 330 81.2
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 6.6e-148 527.7 363 76.9
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.5e-147 526.6 346 79.2
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.5e-147 526.6 343 77.3
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 1.9e-147 526.2 343 77.8
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.9e-147 526.2 343 77.6
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.3e-147 525.4 346 80.1
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.3e-147 525.4 371 73.9
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 4.3e-147 525.0 363 75.8
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 5.6e-147 524.6 345 77.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.2e-146 523.5 345 76.8
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 3.6e-146 521.9 341 79.5
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 4.7e-146 521.5 344 78.2
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 1.4e-145 520.0 343 76.1
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 4.9e-143 511.5 337 77.2
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 2.4e-142 509.2 343 75.2
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.2e-141 506.9 346 79.2
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 6.0e-141 504.6 348 73.6
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 6.0e-141 504.6 348 73.6
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 6.0e-141 504.6 348 73.9
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 7.8e-141 504.2 343 74.9
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 7.8e-141 504.2 343 74.3
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 7.8e-141 504.2 343 74.3
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 7.8e-141 504.2 343 74.3
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.0e-140 503.8 351 73.8
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.7e-140 503.1 351 73.5
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 1.7e-140 503.1 354 72.6
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 2.3e-140 502.7 349 73.4
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 2.3e-140 502.7 343 74.3
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 2.3e-140 502.7 343 74.3
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 3.0e-140 502.3 346 73.7
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 3.9e-140 501.9 346 73.4
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.5e-139 500.0 323 76.8
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.9e-139 499.6 355 71.8
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.6e-139 498.0 310 80.0
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 5.6e-139 498.0 353 71.7
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 1.2e-138 496.9 343 72.9
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.1e-138 496.1 343 72.9
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 2.8e-138 495.7 348 73.9
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 3.1e-137 492.3 354 71.5
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 4.0e-137 491.9 343 75.2
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 6.8e-137 491.1 364 70.6
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 8.9e-137 490.7 344 72.7
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 2.2e-135 486.1 384 67.4
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.8e-133 477.6 346 75.4
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.5e-131 473.4 345 72.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 6.2e-130 468.0 343 72.6
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 4.4e-128 461.8 347 68.6
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.8e-128 461.5 292 80.5
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.8e-128 461.5 292 80.5
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 7.6e-128 461.1 348 69.8
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.9e-128 460.7 344 68.3
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 9.9e-128 460.7 348 67.5
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.3e-127 460.3 344 69.2
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 2.9e-127 459.1 348 68.1
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-126 457.2 347 69.2
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-126 457.2 347 69.2
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.6e-125 453.4 340 65.0
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.3e-124 450.3 323 72.8
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.7e-124 447.6 343 64.4
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 4.8e-122 441.8 344 68.9
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.8e-120 434.9 324 65.7
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.6e-117 426.8 319 65.2
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.0e-116 424.1 273 78.4
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.0e-116 422.5 318 63.8
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.1e-113 414.1 323 62.8
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.8e-108 396.7 319 62.4
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.5e-107 393.7 230 84.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.8e-98 362.8 229 78.2
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 6.3e-98 361.7 255 71.4
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.3e-89 332.0 199 81.4
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.4e-84 317.4 215 74.0
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.7e-83 311.2 298 55.4
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 2.6e-75 286.6 245 63.3
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 1.5e-70 270.8 185 77.8
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.4e-65 254.2 182 65.4
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.4e-65 254.2 182 65.4
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.8e-58 229.9 165 67.3
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 6.6e-55 218.8 137 79.6
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 4.2e-54 216.1 131 81.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.2e-53 214.5 123 87.0
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.3e-50 204.5 122 78.7
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.0e-43 180.6 164 60.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 1.3e-42 177.9 164 61.0
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 4.6e-40 169.5 164 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.1e-37 160.6 155 52.9
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.3e-31 140.6 173 49.1
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 3.0e-31 140.2 120 65.0
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.2e-27 128.3 91 72.5
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.9e-26 122.9 92 71.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 1.7e-23 114.4 70 82.9
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 6.6e-23 112.5 232 36.2
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 1.1e-20 105.1 78 65.4
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.1e-16 90.9 118 44.1
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 9.6e-14 82.0 78 53.8
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.6e-13 81.3 51 76.5
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 2.7e-08 63.9 50 66.0
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.3e-07 61.6 98 43.9
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 8.7e-07 58.9 36 66.7


User provided reference genes

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