Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR314G0001 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.0e-69 264.2 126 100.0
TAR314G0006 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.2e-40 169.1 95 85.3
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.4e-39 164.5 114 75.4
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.1e-39 164.1 113 73.5
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.8e-38 160.6 112 72.3
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.7e-37 159.5 113 72.6
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.4e-26 123.2 123 55.3
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.4e-26 123.2 123 55.3
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 1.4e-23 113.2 123 49.6
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 1.4e-23 113.2 132 48.5
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 5.4e-23 111.3 131 47.3
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.6e-22 109.8 121 52.1
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 3.5e-22 108.6 119 47.9
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 4.6e-22 108.2 123 48.8
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 4.6e-22 108.2 125 44.8
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 6.0e-22 107.8 120 45.8
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 6.0e-22 107.8 120 45.8
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 6.0e-22 107.8 120 45.8
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 7.8e-22 107.5 122 45.9
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.0e-21 107.1 120 50.8
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 1.7e-21 106.3 125 44.0
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.7e-21 106.3 133 44.4
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 2.3e-21 105.9 125 44.0
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 3.0e-21 105.5 118 48.3
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 5.1e-21 104.8 109 51.4
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 5.1e-21 104.8 135 41.5
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 5.1e-21 104.8 117 46.2
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.1e-21 104.8 117 46.2
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.1e-21 104.8 117 46.2
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.1e-21 104.8 117 46.2
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 5.1e-21 104.8 123 44.7
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 6.6e-21 104.4 135 40.7
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 6.6e-21 104.4 134 44.0
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 6.6e-21 104.4 127 44.9
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 8.7e-21 104.0 125 48.0
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 1.1e-20 103.6 125 48.0
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 1.1e-20 103.6 113 48.7
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 1.1e-20 103.6 132 41.7
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 3.3e-20 102.1 134 41.8
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 4.3e-20 101.7 130 40.0
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 9.6e-20 100.5 132 40.9
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.3e-19 100.1 134 39.6
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 1.3e-19 100.1 117 47.0
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.6e-19 98.6 103 55.3
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 4.8e-19 98.2 125 41.6
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 4.8e-19 98.2 120 45.0
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 6.2e-19 97.8 130 39.2
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 6.2e-19 97.8 132 40.2
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 8.1e-19 97.4 125 39.2
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 8.1e-19 97.4 122 44.3
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.8e-18 96.3 132 44.7
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 1.8e-18 96.3 127 42.5
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 2.4e-18 95.9 116 44.8
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 2.4e-18 95.9 126 42.9
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 2.4e-18 95.9 117 45.3
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 4.0e-18 95.1 120 48.3
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 4.0e-18 95.1 120 43.3
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 5.3e-18 94.7 122 43.4
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 5.3e-18 94.7 117 41.9
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.2e-17 93.6 122 45.9
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-17 93.2 126 46.0
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 2.0e-17 92.8 112 47.3
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.6e-17 92.4 130 41.5
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 5.8e-17 91.3 96 49.0
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 5.8e-17 91.3 101 50.5
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 9.9e-17 90.5 125 40.8
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.3e-16 90.1 119 43.7
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 1.7e-16 89.7 125 40.8
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 2.9e-16 89.0 126 39.7
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 3.8e-16 88.6 95 46.3
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 6.4e-16 87.8 125 40.8
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.4e-16 87.8 129 40.3
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 8.4e-16 87.4 128 39.1
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.4e-16 87.4 143 39.2
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.1e-15 87.0 132 39.4
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 1.4e-15 86.7 111 42.3
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 1.9e-15 86.3 134 41.8
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 2.4e-15 85.9 121 41.3
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 4.2e-15 85.1 123 38.2
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 5.4e-15 84.7 119 41.2
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 7.1e-15 84.3 113 42.5
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 9.3e-15 84.0 130 39.2
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 9.3e-15 84.0 130 39.2
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.2e-14 83.6 104 44.2
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-14 83.6 119 45.4
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 1.6e-14 83.2 113 42.5
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.1e-14 82.8 122 41.0
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 2.7e-14 82.4 113 42.5
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 4.6e-14 81.6 121 40.5
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 6.0e-14 81.3 106 43.4
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.0e-14 81.3 118 39.0
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 7.9e-14 80.9 110 41.8
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 7.9e-14 80.9 110 41.8
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 7.9e-14 80.9 123 39.0
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 1.3e-13 80.1 120 37.5
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 1.7e-13 79.7 128 36.7
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 1.7e-13 79.7 117 40.2
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.7e-13 79.7 122 39.3
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.3e-13 79.3 120 39.2
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.3e-13 79.3 120 39.2
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 2.3e-13 79.3 121 41.3
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 3.0e-13 79.0 123 40.7
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 3.0e-13 79.0 105 40.0
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.1e-13 78.2 126 37.3
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 5.1e-13 78.2 120 38.3
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 5.1e-13 78.2 112 40.2
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 5.1e-13 78.2 112 40.2
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.6e-13 77.8 127 40.2
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 8.7e-13 77.4 113 41.6
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 1.1e-12 77.0 119 37.8
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.9e-12 76.3 113 41.6
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 2.5e-12 75.9 129 38.0
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.5e-12 75.9 81 48.1
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 9.6e-12 73.9 78 44.9
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 2.8e-11 72.4 104 43.3
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.6e-11 72.0 126 36.5
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 3.6e-11 72.0 120 38.3
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 4.8e-11 71.6 125 37.6
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 4.8e-11 71.6 76 46.1
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 1.4e-10 70.1 121 37.2
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.4e-10 70.1 65 49.2
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.4e-10 70.1 115 37.4
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 5.3e-10 68.2 133 35.3
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.3e-10 68.2 86 41.9
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 5.3e-10 68.2 68 45.6
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.9e-10 67.8 120 35.8
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 2.9e-08 62.4 106 36.8
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 4.9e-08 61.6 131 33.6
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 6.4e-08 61.2 131 32.1
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 8.4e-08 60.8 112 37.5
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 2.1e-06 56.2 75 42.7
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 4.6e-06 55.1 125 32.8


User provided reference genes

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