Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 9.1e-78 293.5 148 100.0
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 6.5e-60 234.2 132 89.4
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 2.7e-53 212.2 134 76.1
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.7e-52 209.5 138 73.9
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.5e-51 205.7 141 72.3
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 9.4e-51 203.8 134 75.4
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 9.4e-51 203.8 136 74.3
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.2e-50 203.4 131 74.8
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 6.1e-50 201.1 136 72.8
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 8.0e-50 200.7 144 66.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 4.0e-49 198.4 133 71.4
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 5.2e-49 198.0 148 66.2
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.2e-48 196.8 136 72.8
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 3.4e-48 195.3 126 75.4
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 5.7e-48 194.5 137 68.6
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 7.5e-48 194.1 150 63.3
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 7.5e-48 194.1 137 73.0
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 2.2e-47 192.6 136 70.6
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.8e-47 192.2 137 72.3
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.7e-47 191.8 136 70.6
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 6.3e-47 191.0 124 75.0
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.1e-46 190.3 137 71.5
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 1.4e-46 189.9 135 66.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.4e-46 189.1 126 69.8
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 2.4e-46 189.1 145 64.8
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 2.4e-46 189.1 164 61.0
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 3.1e-46 188.7 123 74.0
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 3.1e-46 188.7 124 68.5
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 4.1e-46 188.3 135 68.9
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 7.0e-46 187.6 145 64.8
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.0e-46 187.6 137 66.4
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.0e-46 187.6 137 66.4
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 7.0e-46 187.6 139 63.3
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.6e-45 186.4 132 66.7
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 2.7e-45 185.7 150 59.3
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 2.7e-45 185.7 139 63.3
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.5e-45 185.3 132 65.9
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 3.5e-45 185.3 130 68.5
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 4.5e-45 184.9 126 70.6
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 5.9e-45 184.5 121 70.2
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 7.7e-45 184.1 133 66.2
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.0e-44 183.7 134 64.9
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.0e-44 183.7 132 66.7
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.0e-44 183.7 134 66.4
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.7e-44 183.0 135 66.7
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 2.3e-44 182.6 137 62.0
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 2.9e-44 182.2 132 65.2
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 2.9e-44 182.2 132 65.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 2.9e-44 182.2 132 65.2
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 5.0e-44 181.4 134 64.2
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 6.5e-44 181.0 133 63.9
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.1e-43 180.3 132 64.4
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 2.5e-43 179.1 141 63.1
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 2.5e-43 179.1 133 65.4
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 2.5e-43 179.1 131 64.1
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 4.2e-43 178.3 142 61.3
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 4.2e-43 178.3 133 63.9
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 5.5e-43 177.9 123 69.1
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 9.5e-43 177.2 130 64.6
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.2e-42 176.8 131 64.1
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.6e-42 176.4 123 68.3
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 1.6e-42 176.4 128 64.8
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.1e-42 176.0 140 63.6
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.6e-42 175.3 126 65.1
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.7e-42 174.9 128 63.3
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 6.1e-42 174.5 140 60.0
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 6.1e-42 174.5 123 66.7
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.0e-41 173.7 115 71.3
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 2.3e-41 172.6 134 64.9
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.3e-41 172.6 128 64.8
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.0e-41 172.2 126 65.1
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 4.0e-41 171.8 128 66.4
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.2e-40 170.2 138 63.0
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 1.2e-40 170.2 128 65.6
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.5e-40 169.9 123 68.3
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 9.8e-40 167.2 141 59.6
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.3e-39 166.8 107 74.8
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.3e-39 166.8 145 56.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.7e-39 166.4 123 64.2
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.7e-39 166.4 126 65.9
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.2e-39 166.0 122 64.8
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.3e-39 164.5 107 73.8
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.1e-38 161.8 123 62.6
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 4.1e-38 161.8 143 58.7
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 7.0e-38 161.0 122 62.3
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 1.6e-37 159.8 142 57.7
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.6e-36 154.5 171 49.7
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 8.6e-36 154.1 107 72.0
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 3.3e-35 152.1 119 68.9
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 5.6e-35 151.4 181 48.6
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 9.5e-35 150.6 153 53.6
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.2e-34 150.2 118 66.1
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 3.0e-33 145.6 100 68.0
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 4.0e-33 145.2 103 64.1
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 5.2e-33 144.8 105 69.5
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 5.2e-33 144.8 106 69.8
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 6.8e-33 144.4 139 54.7
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.5e-32 143.3 104 64.4
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.3e-31 140.2 151 50.3
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.7e-31 138.7 96 69.8
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.9e-30 136.3 107 58.9
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.2e-30 135.6 122 55.7
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 5.4e-30 134.8 103 67.0
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 9.2e-30 134.0 122 54.9
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.6e-29 133.3 120 51.7
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.5e-27 126.7 121 50.4
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 2.5e-27 125.9 122 49.2
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 3.6e-26 122.1 94 63.8
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 4.0e-25 118.6 98 62.2
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 4.4e-24 115.2 90 65.6
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 4.9e-23 111.7 92 63.0
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 7.0e-22 107.8 136 46.3
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.9e-19 99.8 98 55.1
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 5.6e-19 98.2 74 64.9
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 2.8e-18 95.9 102 46.1
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 3.6e-18 95.5 101 42.6
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 3.1e-17 92.4 71 62.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 5.8e-16 88.2 123 45.5
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.1e-14 84.0 65 63.1
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 4.6e-13 78.6 145 35.2
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 6.2e-10 68.2 116 25.9


User provided reference genes

Program Settings