Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.4e-56 221.9 106 100.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.2e-20 103.2 72 73.6
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.4e-19 99.8 78 66.7
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.0e-14 83.6 104 48.1
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.5e-13 79.7 72 61.1
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 4.3e-13 78.2 73 58.9
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 4.3e-13 78.2 72 56.9
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 2.1e-12 75.9 71 54.9
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.8e-12 75.5 66 59.1
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 2.8e-12 75.5 66 62.1
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.8e-12 75.5 66 59.1
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 2.8e-12 75.5 66 59.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.7e-12 74.7 66 59.1
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 4.7e-12 74.7 66 59.1
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.2e-12 74.3 71 53.5
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 8.1e-12 73.9 70 57.1
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 1.1e-11 73.6 99 41.4
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.4e-11 73.2 66 57.6
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.3e-11 72.4 71 54.9
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.1e-11 72.0 72 56.9
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 3.1e-11 72.0 66 57.6
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.2e-11 71.2 66 59.1
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 5.2e-11 71.2 66 56.1
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 6.8e-11 70.9 66 57.6
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 6.8e-11 70.9 65 55.4
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 8.9e-11 70.5 65 55.4
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.2e-10 70.1 63 58.7
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.2e-10 70.1 63 58.7
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.2e-10 70.1 67 58.2
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.2e-10 70.1 66 53.0
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.5e-10 69.7 73 53.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.5e-10 69.7 66 56.1
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 2.0e-10 69.3 66 56.1
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 2.0e-10 69.3 73 53.4
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 2.0e-10 69.3 66 57.6
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 3.4e-10 68.6 67 53.7
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 4.4e-10 68.2 103 44.7
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 5.8e-10 67.8 63 55.6
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 7.6e-10 67.4 48 68.8
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 7.6e-10 67.4 67 56.7
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 9.9e-10 67.0 68 54.4
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 9.9e-10 67.0 68 54.4
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 9.9e-10 67.0 77 50.6
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 9.9e-10 67.0 74 51.4
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 9.9e-10 67.0 79 48.1
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 9.9e-10 67.0 69 52.2
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.3e-09 66.6 72 55.6
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-09 66.6 65 52.3
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.3e-09 66.6 65 53.8
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.3e-09 66.6 66 56.1
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 1.7e-09 66.2 67 52.2
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 2.2e-09 65.9 67 52.2
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 2.2e-09 65.9 67 52.2
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 2.9e-09 65.5 66 57.6
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 2.9e-09 65.5 72 54.2
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.9e-09 65.5 63 54.0
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 4.9e-09 64.7 105 40.0
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 4.9e-09 64.7 71 50.7
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 6.4e-09 64.3 68 52.9
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 6.4e-09 64.3 65 53.8
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 8.4e-09 63.9 68 50.0
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 8.4e-09 63.9 72 52.8
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 8.4e-09 63.9 72 52.8
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 8.4e-09 63.9 65 52.3
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 8.4e-09 63.9 70 48.6
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.1e-08 63.5 64 54.7
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.1e-08 63.5 72 52.8
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 1.4e-08 63.2 49 63.3
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 1.4e-08 63.2 66 54.5
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.4e-08 63.2 72 52.8
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.4e-08 63.2 72 52.8
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 1.4e-08 63.2 104 42.3
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 1.9e-08 62.8 66 51.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 2.4e-08 62.4 66 51.5
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.4e-08 62.4 65 49.2
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 2.4e-08 62.4 71 49.3
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 3.2e-08 62.0 68 48.5
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 3.2e-08 62.0 65 52.3
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 4.1e-08 61.6 66 53.0
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 4.1e-08 61.6 71 45.1
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 7.1e-08 60.8 90 45.6
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 7.1e-08 60.8 90 45.6
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 7.1e-08 60.8 57 52.6
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 9.2e-08 60.5 45 62.2
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.6e-07 59.7 57 50.9
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.1e-07 59.3 71 47.9
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 2.1e-07 59.3 71 45.1
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 2.1e-07 59.3 68 48.5
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 2.7e-07 58.9 52 57.7
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 3.5e-07 58.5 73 43.8
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 4.6e-07 58.2 73 43.8
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 6.0e-07 57.8 66 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 6.0e-07 57.8 67 44.8
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 7.8e-07 57.4 76 40.8
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 7.8e-07 57.4 68 44.1
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-06 57.0 67 47.8
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.3e-06 56.6 67 46.3
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.7e-06 56.2 70 42.9
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 1.7e-06 56.2 65 49.2
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.7e-06 56.2 67 49.3
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.7e-06 56.2 65 50.8
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 2.3e-06 55.8 41 63.4
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.3e-06 55.8 64 45.3
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.3e-06 55.8 64 45.3
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 2.3e-06 55.8 69 44.9
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 2.3e-06 55.8 67 46.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 3.0e-06 55.5 66 47.0
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 3.9e-06 55.1 69 43.5
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 5.1e-06 54.7 47 53.2
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 6.6e-06 54.3 67 43.3
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 6.6e-06 54.3 67 43.3
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 6.6e-06 54.3 67 43.3
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 6.6e-06 54.3 46 54.3
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 8.6e-06 53.9 69 43.5


User provided reference genes

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