Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.4e-99 366.3 187 100.0
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 3.3e-93 345.1 219 84.5
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 3.8e-73 278.5 219 71.7
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 1.8e-70 269.6 215 67.9
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 2.3e-70 269.2 215 68.4
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 2.3e-70 269.2 215 68.4
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 5.1e-70 268.1 218 69.3
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 5.1e-70 268.1 218 69.3
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 6.7e-70 267.7 215 70.2
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 4.4e-69 265.0 215 67.4
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 4.4e-69 265.0 215 67.4
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 4.4e-69 265.0 215 67.4
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 9.1e-67 257.3 215 67.9
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 1.5e-66 256.5 219 67.6
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 3.0e-62 242.3 219 63.9
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 1.5e-61 240.0 206 65.5
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 3.3e-61 238.8 218 61.9
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.8e-59 233.0 223 62.8
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.6e-58 229.9 211 60.2
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 9.1e-43 177.6 215 47.9
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.0e-29 133.3 242 35.1
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.7e-28 130.2 200 41.0
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 1.4e-27 127.1 182 39.6
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 5.4e-27 125.2 216 38.9
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 1.2e-26 124.0 216 38.4
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 1.8e-22 110.2 184 35.3
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 3.1e-22 109.4 183 36.1
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.2e-21 107.5 187 34.8
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 5.8e-21 105.1 177 35.0
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.7e-20 103.6 188 34.6
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 2.9e-20 102.8 184 34.2
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.7e-20 102.4 188 34.6
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 3.2e-19 99.4 185 37.8
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 4.1e-19 99.0 189 37.0
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 5.4e-19 98.6 193 33.2
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 7.1e-19 98.2 183 33.9
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 1.6e-18 97.1 223 32.7
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.7e-18 96.3 219 32.0
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 2.7e-18 96.3 190 33.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 6.0e-18 95.1 157 35.7
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.0e-18 95.1 223 32.3
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.3e-17 94.0 186 34.4
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.3e-17 94.0 159 35.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.3e-17 93.2 225 33.8
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 3.0e-17 92.8 159 32.7
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 3.0e-17 92.8 157 35.0
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.0e-17 92.8 156 35.3
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.9e-17 92.4 188 32.4
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 6.6e-17 91.7 183 33.9
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 6.6e-17 91.7 187 36.4
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 1.1e-16 90.9 155 35.5
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.1e-16 90.9 179 31.8
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 1.1e-16 90.9 145 39.3
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.9e-16 90.1 186 34.9
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 2.5e-16 89.7 186 34.9
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.5e-16 89.7 177 33.3
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 3.3e-16 89.4 186 34.9
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 4.3e-16 89.0 185 31.4
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 5.6e-16 88.6 217 29.0
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 7.3e-16 88.2 180 31.7
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.2e-15 87.4 182 31.3
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.8e-15 86.3 150 35.3
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 3.6e-15 85.9 181 33.7
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 4.7e-15 85.5 177 35.0
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 4.7e-15 85.5 183 34.4
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 6.2e-15 85.1 162 32.7
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 8.1e-15 84.7 181 33.1
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 8.1e-15 84.7 124 39.5
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 1.1e-14 84.3 171 33.3
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.4e-14 84.0 149 34.9
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 6.8e-14 81.6 165 33.3
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.5e-13 80.5 217 28.1
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.0e-13 80.1 160 31.9
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 3.4e-13 79.3 165 32.7
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 3.4e-13 79.3 165 30.9
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 4.4e-13 79.0 201 30.3
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 4.4e-13 79.0 231 31.6
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 4.4e-13 79.0 200 32.0
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 5.8e-13 78.6 220 29.5
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 3.7e-12 75.9 188 30.9
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.4e-12 75.1 156 32.1
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 8.4e-12 74.7 215 27.4
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 3.2e-11 72.8 168 29.2
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 3.2e-11 72.8 185 29.7
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 4.1e-11 72.4 156 29.5
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 4.1e-11 72.4 156 29.5
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 5.4e-11 72.0 182 31.3
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.6e-10 70.5 152 34.2
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 3.5e-10 69.3 61 49.2
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 4.6e-10 68.9 143 30.8
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 6.0e-10 68.6 143 30.8
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 7.8e-10 68.2 171 27.5
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 2.3e-09 66.6 218 29.8
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 6.6e-09 65.1 143 30.8
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 8.6e-09 64.7 129 30.2
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 1.5e-08 63.9 65 50.8
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.9e-08 63.5 59 55.9
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 4.3e-08 62.4 138 28.3
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 1.1e-06 57.8 177 29.9
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.4e-06 57.4 191 26.7
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 6.8e-06 55.1 134 29.9


User provided reference genes

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