Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.0e-158 562.4 280 100.0
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.0e-158 562.4 280 100.0
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 6.4e-141 504.2 280 88.9
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 1.1e-140 503.4 280 86.4
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 5.4e-140 501.1 280 86.8
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 1.0e-138 496.9 280 86.4
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 1.0e-138 496.9 280 86.4
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 1.0e-138 496.9 280 86.4
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 8.6e-138 493.8 280 88.6
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 9.5e-137 490.3 280 85.0
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 2.1e-136 489.2 280 84.6
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 6.2e-136 487.6 280 86.1
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 2.9e-133 478.8 281 84.0
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 1.1e-132 476.9 280 82.5
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 8.1e-112 407.5 280 72.9
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 2.0e-89 333.2 282 62.1
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 4.3e-89 332.0 282 57.1
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 2.8e-88 329.3 252 65.1
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 4.8e-88 328.6 281 57.7
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 1.8e-87 326.6 283 58.0
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 2.4e-87 326.2 287 59.2
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.2e-86 323.9 263 63.1
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 1.2e-86 323.9 291 59.1
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 2.6e-86 322.8 287 58.5
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 2.2e-85 319.7 267 60.3
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 6.5e-85 318.2 279 58.8
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 8.5e-85 317.8 259 59.8
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 1.4e-84 317.0 250 62.8
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 4.2e-84 315.5 269 59.1
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 9.4e-84 314.3 249 63.1
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.6e-83 313.5 249 61.0
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 3.6e-83 312.4 258 58.9
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 7.9e-83 311.2 266 60.2
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 2.3e-82 309.7 261 59.0
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 3.9e-82 308.9 261 60.2
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 6.7e-82 308.1 251 60.2
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 6.7e-82 308.1 279 57.3
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 6.7e-82 308.1 267 57.3
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 8.8e-82 307.8 277 56.3
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 2.6e-81 306.2 283 55.5
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 3.3e-81 305.8 274 56.2
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 4.4e-81 305.4 241 62.2
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 4.4e-81 305.4 261 58.2
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 4.4e-81 305.4 283 55.5
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 7.4e-81 304.7 274 56.9
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 1.3e-80 303.9 241 61.8
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 1.7e-80 303.5 272 57.7
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 1.7e-80 303.5 261 57.9
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 2.2e-80 303.1 273 56.0
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.2e-80 303.1 273 56.0
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-80 302.8 249 60.6
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.7e-80 302.4 273 55.7
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.7e-80 302.4 273 56.0
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.8e-80 302.0 273 56.0
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 8.2e-80 301.2 262 58.0
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 1.1e-79 300.8 246 61.0
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.4e-79 300.4 249 60.2
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 1.8e-79 300.1 258 58.5
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.1e-79 299.3 295 53.9
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 4.1e-79 298.9 227 63.4
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 2.0e-78 296.6 315 48.9
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 1.0e-77 294.3 249 59.4
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 1.3e-77 293.9 266 55.6
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 1.7e-77 293.5 279 54.1
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 1.7e-77 293.5 275 56.4
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 2.2e-77 293.1 283 54.4
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 6.5e-77 291.6 272 54.0
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 2.5e-76 289.7 263 55.5
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.2e-76 289.3 273 53.8
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 9.4e-76 287.7 250 56.4
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 1.2e-75 287.3 257 56.4
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.6e-75 287.0 239 59.0
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 3.6e-75 285.8 248 56.9
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 1.8e-74 283.5 247 56.7
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 5.2e-74 282.0 301 51.8
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 6.7e-74 281.6 260 53.8
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 6.7e-74 281.6 281 53.0
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 1.5e-73 280.4 301 51.5
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 1.5e-73 280.4 241 59.3
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 2.0e-73 280.0 281 53.0
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 5.7e-73 278.5 278 51.1
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 1.7e-72 276.9 252 57.9
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 2.2e-72 276.6 251 56.6
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 2.8e-72 276.2 281 53.0
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 3.7e-72 275.8 245 55.1
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 1.2e-70 270.8 245 55.5
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 7.7e-70 268.1 255 53.7
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 2.9e-69 266.2 211 64.0
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 5.0e-69 265.4 257 52.5
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 2.5e-68 263.1 245 54.3
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 4.7e-67 258.8 306 46.1
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.0e-66 257.7 234 54.3
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.6e-65 253.1 255 52.2
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.7e-64 250.4 177 67.8
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 4.8e-64 248.8 227 53.3
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 4.8e-64 248.8 216 56.0
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 1.4e-63 247.3 189 63.0
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 1.7e-61 240.4 254 50.8
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.1e-60 237.7 268 48.9
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 7.2e-60 235.0 195 57.4
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 6.8e-58 228.4 265 48.7
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.7e-53 213.8 262 47.3
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.5e-49 200.7 244 46.7
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.3e-45 187.6 242 42.1
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 2.8e-43 179.9 186 48.4
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.8e-43 179.9 257 42.0
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 1.7e-40 170.6 233 42.9
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 4.0e-34 149.4 233 36.1
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 4.4e-33 146.0 252 34.5
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 5.1e-29 132.5 110 62.7
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 4.3e-28 129.4 231 37.2
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.6e-27 127.5 101 55.4
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.6e-27 127.5 101 55.4
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 8.1e-27 125.2 88 75.0
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.2e-25 121.3 146 45.2
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.5e-25 120.9 83 74.7
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-23 114.0 153 41.8
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.4e-23 112.5 151 41.1
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 2.1e-22 110.5 274 31.4
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 6.0e-22 109.0 122 49.2
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.3e-21 107.8 232 33.6
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 8.6e-21 105.1 274 29.2
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 9.6e-20 101.7 244 29.9
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 1.3e-13 81.3 76 56.6
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-12 77.4 89 40.4
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 4.3e-12 76.3 43 79.1
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 6.2e-11 72.4 61 54.1
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 8.1e-11 72.0 59 54.2
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.5e-09 67.8 57 57.9
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 6.4e-08 62.4 42 69.0


User provided reference genes

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