Gene: AT5G52110

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G52110
  • Transcript Identifier AT5G52110.2
  • Gene Type Coding gene
  • Location Chr5 : 21172159-21173953 : negative

Gene Family Information

  • ID HOM05D005908
  • #Genes/#Species 133/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G52110.2
  • symbol HCF208
  • Alias CCB2,COFACTOR ASSEMBLY OF COMPLEX C
  • full_name HIGH CHLOROPHYLL FLUORESCENCE 208
  • uniprot Q9FJ81

Descriptions

  • Description chaperone (DUF2930)
  • Computational description HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010190
IEA
GOA Databasecytochrome b6f complex assembly
GO:0010190
IMP
Gene Ontologycytochrome b6f complex assembly1
GO:0010190
IEA
InterProcytochrome b6f complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast1
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009536
IEA
GOA Databaseplastid
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009579
IEA
GOA Databasethylakoid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044970 COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
IPR021325 Cofactor assembly of complex C subunit B, CCB2/CCB4
Mapman id Description
1.1.2.9.1.2 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).assembly factor (CCB2)