Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0003_0090 Schrenkiella parvula HOM05D001673 ORTHO05D371109 3.1e-212 741.5 369 100.0
AL6G12160 Arabidopsis lyrata HOM05D001673 ORTHO05D002312 1.6e-46 191.0 258 45.7
BolC3t12682H Brassica oleracea HOM05D001673 ORTHO05D002312 8.1e-43 178.7 263 42.2
BraA03t09477Z Brassica rapa HOM05D001673 ORTHO05D002312 5.3e-42 176.0 263 42.6
AT5G02880 Arabidopsis thaliana HOM05D001673 ORTHO05D002312 2.6e-41 173.7 252 43.3
Carub.0006s0169 Capsella rubella HOM05D001673 ORTHO05D002312 7.6e-41 172.2 258 43.4
Thhalv10012430m.g Eutrema salsugineum HOM05D001673 ORTHO05D002312 2.4e-39 167.2 258 41.9
Aa31LG1G22040 Aethionema arabicum HOM05D001673 ORTHO05D002312 3.2e-39 166.8 257 40.9
CARHR210440 Cardamine hirsuta HOM05D001673 ORTHO05D002312 1.0e-37 161.8 258 41.9
A03p00950 Brassica napus HOM05D001673 ORTHO05D002312 3.3e-36 156.8 250 41.6
C03p01230 Brassica napus HOM05D001673 ORTHO05D002312 3.3e-36 156.8 245 41.2
BcaC03g13042 Brassica carinata HOM05D001673 ORTHO05D002312 5.6e-36 156.0 259 40.5
C02p00700 Brassica napus HOM05D001673 ORTHO05D002312 7.3e-36 155.6 259 40.5
BolC2t06068H Brassica oleracea HOM05D001673 ORTHO05D002312 7.3e-36 155.6 259 40.5
BraA02t04733Z Brassica rapa HOM05D001673 ORTHO05D002312 7.3e-36 155.6 254 40.9
BcaB05g21863 Brassica carinata HOM05D001673 ORTHO05D002312 8.1e-35 152.1 258 39.9
THA.LOC104816317 Tarenaya hassleriana HOM05D001673 ORTHO05D002312 3.4e-33 146.7 258 37.2
Sp6g39710 Schrenkiella parvula HOM05D001673 ORTHO05D002312 1.5e-28 131.3 109 66.1
BcaB01g05869 Brassica carinata HOM05D001673 ORTHO05D002312 1.3e-24 118.2 98 61.2
Duzib093G1340 Durio zibethinus HOM05D001673 ORTHO05D002312 6.7e-13 79.3 258 25.6
Gohir.A04G076800 Gossypium hirsutum HOM05D001673 ORTHO05D002312 6.7e-13 79.3 258 26.4
Gohir.D04G115800 Gossypium hirsutum HOM05D001673 ORTHO05D002312 6.7e-13 79.3 263 26.6
Gorai.009G420400 Gossypium raimondii HOM05D001673 ORTHO05D002312 1.5e-12 78.2 258 26.4
Thecc.05G053500 Theobroma cacao HOM05D001673 ORTHO05D002312 1.9e-12 77.8 256 26.6
Cpa.g.sc114.47 Carica papaya HOM05D001673 ORTHO05D002312 2.8e-11 73.9 262 25.6
Atru.chr8.2552 Acer truncatum HOM05D001673 ORTHO05D002312 1.4e-10 71.6 259 26.3
CSS0045277 Camellia sinensis var. sinensis HOM05D001673 ORTHO05D002312 2.6e-09 67.4 259 24.7
Eucgr.A01178 Eucalyptus grandis HOM05D001673 ORTHO05D002312 1.0e-08 65.5 159 30.8
Ciclev10010897m.g Citrus clementina HOM05D001673 ORTHO05D002312 1.3e-08 65.1 259 24.7
GSVIVG01025537001 Vitis vinifera HOM05D001673 ORTHO05D002312 2.9e-08 63.9 257 24.1
Dinv37248 Davidia involucrata HOM05D001673 ORTHO05D002312 5.0e-08 63.2 52 59.6
Glyma.13G136900 Glycine max HOM05D001673 ORTHO05D002312 5.0e-08 63.2 258 25.6
Psat0s773g0120 Pisum sativum HOM05D001673 ORTHO05D002312 6.5e-08 62.8 257 25.7
Manes.08G003000 Manihot esculenta HOM05D001673 ORTHO05D002312 8.5e-08 62.4 250 24.0
Cfa017503 Carpinus fangiana HOM05D001673 ORTHO05D002312 1.4e-07 61.6 260 24.2
COL.COLO4_27086 Corchorus olitorius HOM05D001673 ORTHO05D002312 1.4e-07 61.6 237 24.1
TPR.G30254 Trifolium pratense HOM05D001673 ORTHO05D002312 1.4e-07 61.6 247 25.1
Haze_11137 Corylus avellana HOM05D001673 ORTHO05D002312 1.9e-07 61.2 260 24.2
Lj5g0017747 Lotus japonicus HOM05D001673 ORTHO05D002312 2.5e-07 60.8 61 52.5
Prupe.6G241700 Prunus persica HOM05D001673 ORTHO05D002312 3.2e-07 60.5 52 57.7
TWI53G0206 Tripterygium wilfordii HOM05D001673 ORTHO05D002312 4.2e-07 60.1 245 25.7
Medtr1g066940 Medicago truncatula HOM05D001673 ORTHO05D002312 5.5e-07 59.7 51 58.8
Lj3A979T60 Lonicera japonica HOM05D001673 ORTHO05D002312 7.2e-07 59.3 252 24.6
arahy.Tifrunner.gnm1.ann1.B53YPK Arachis hypogaea HOM05D001673 ORTHO05D002312 9.4e-07 58.9 93 39.8
arahy.Tifrunner.gnm1.ann1.NVTB4G Arachis hypogaea HOM05D001673 ORTHO05D002312 9.4e-07 58.9 93 39.8
Ca_11447_v3 Cicer arietinum L. HOM05D001673 ORTHO05D002312 9.4e-07 58.9 61 50.8
FAN05G5612 Fragaria x ananassa HOM05D001673 ORTHO05D002312 9.4e-07 58.9 266 22.9
QL07p045315 Quercus lobata HOM05D001673 ORTHO05D002312 1.2e-06 58.5 251 23.5
Rhsim04G0151600 Rhododendron simsii HOM05D001673 ORTHO05D002312 1.2e-06 58.5 261 22.6
MD04G1104600 Malus domestica HOM05D001673 ORTHO05D002312 1.6e-06 58.2 52 55.8
CANSAT80G1184 Cannabis sativa HOM05D001673 ORTHO05D002312 2.1e-06 57.8 268 23.5
Glyma.10G049100 Glycine max HOM05D001673 ORTHO05D002312 2.1e-06 57.8 257 24.9
Nitab4.5_0001142g0080 Nicotiana tabacum HOM05D001673 ORTHO05D002312 2.1e-06 57.8 69 47.8
Nitab4.5_0009766g0020 Nicotiana tabacum HOM05D001673 ORTHO05D002312 2.1e-06 57.8 69 47.8
vmacro08696 Vaccinium macrocarpon HOM05D001673 ORTHO05D002312 2.1e-06 57.8 260 23.5
Cc06_g03520 Coffea canephora HOM05D001673 ORTHO05D002312 2.7e-06 57.4 62 43.5
FvH4_6g15270 Fragaria vesca HOM05D001673 ORTHO05D002312 2.7e-06 57.4 266 22.6
Potri.016G085200 Populus trichocarpa HOM05D001673 ORTHO05D002312 2.7e-06 57.4 53 54.7
CiPaw.09G180300 Carya illinoinensis HOM05D001673 ORTHO05D002312 3.6e-06 57.0 52 53.8
Migut.J00412 Erythranthe guttata HOM05D001673 ORTHO05D002312 4.6e-06 56.6 51 52.9
MD12G1124500 Malus domestica HOM05D001673 ORTHO05D002312 4.6e-06 56.6 52 53.8
Phvul.007G163300 Phaseolus vulgaris HOM05D001673 ORTHO05D002312 6.1e-06 56.2 257 24.9
ECA248G3606 Erigeron canadensis HOM05D001673 ORTHO05D002312 7.9e-06 55.8 52 53.8
FAN09G0078 Fragaria x ananassa HOM05D001673 ORTHO05D002312 7.9e-06 55.8 52 51.9
FAN14G0414 Fragaria x ananassa HOM05D001673 ORTHO05D002312 7.9e-06 55.8 52 51.9
Oeu060083.1 Olea europaea HOM05D001673 ORTHO05D002312 7.9e-06 55.8 65 41.5


User provided reference genes

Program Settings