Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0002_0170 Schrenkiella parvula HOM05D003567 ORTHO05D004117 6.3e-163 577.4 295 100.0
C01p34500 Brassica napus HOM05D003567 ORTHO05D004117 6.7e-133 477.6 295 84.7
BolC1t03421H Brassica oleracea HOM05D003567 ORTHO05D004117 6.7e-133 477.6 295 84.7
BcaB04g20139 Brassica carinata HOM05D003567 ORTHO05D004117 1.2e-132 476.9 294 84.4
Thhalv10023619m.g Eutrema salsugineum HOM05D003567 ORTHO05D004117 2.0e-132 476.1 295 84.7
BraA01t02844Z Brassica rapa HOM05D003567 ORTHO05D004117 1.1e-130 470.3 295 84.1
BcaC09g49610 Brassica carinata HOM05D003567 ORTHO05D004117 1.7e-128 463.0 283 85.5
AL1G65120 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 1.9e-127 459.5 297 81.1
CARHR055820 Cardamine hirsuta HOM05D003567 ORTHO05D004117 1.5e-119 433.3 302 75.8
BcaC05g25942 Brassica carinata HOM05D003567 ORTHO05D004117 5.2e-117 424.9 269 83.6
Carub.0002s0892 Capsella rubella HOM05D003567 ORTHO05D004117 7.5e-116 421.0 297 76.8
AT1G54680 Arabidopsis thaliana HOM05D003567 ORTHO05D004117 1.7e-115 419.9 294 76.9
Aa31LG2G12110 Aethionema arabicum HOM05D003567 ORTHO05D004117 4.5e-113 411.8 311 70.1
THA.LOC104805845 Tarenaya hassleriana HOM05D003567 ORTHO05D004117 9.2e-82 307.8 293 59.0
AL7G51030 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 4.0e-77 292.4 198 79.3
A01p27100 Brassica napus HOM05D003567 ORTHO05D004117 1.0e-72 277.7 189 78.8
Dinv40231 Davidia involucrata HOM05D003567 ORTHO05D004117 1.3e-62 244.2 289 47.1
TAR365G0081 Trochodendron aralioides HOM05D003567 ORTHO05D004117 4.8e-62 242.3 288 46.2
PGR031G3379 Punica granatum HOM05D003567 ORTHO05D004117 6.9e-61 238.4 304 45.7
GSVIVG01022012001 Vitis vinifera HOM05D003567 ORTHO05D004117 1.2e-57 227.6 277 46.2
Nn3g21221 Nelumbo nucifera HOM05D003567 ORTHO05D004117 7.9e-57 224.9 298 43.3
C05p18930 Brassica napus HOM05D003567 ORTHO05D004117 3.0e-56 223.0 148 80.4
Cpa.g.sc84.116 Carica papaya HOM05D003567 ORTHO05D004117 3.9e-56 222.6 302 45.4
Eucgr.H04432 Eucalyptus grandis HOM05D003567 ORTHO05D004117 4.5e-52 209.1 291 41.6
Sed0008957 Sechium edule HOM05D003567 ORTHO05D004117 5.8e-52 208.8 293 40.6
Actinidia30900 Actinidia chinensis HOM05D003567 ORTHO05D004117 4.9e-51 205.7 246 46.7
Solyc08g042140.3 Solanum lycopersicum HOM05D003567 ORTHO05D004117 2.5e-50 203.4 280 44.3
Nitab4.5_0006272g0050 Nicotiana tabacum HOM05D003567 ORTHO05D004117 1.2e-49 201.1 291 43.6
Oeu033946.2 Olea europaea HOM05D003567 ORTHO05D004117 1.6e-49 200.7 306 41.5
Aqoxy2G03162 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 2.7e-49 199.9 290 40.3
Duzib106G0722 Durio zibethinus HOM05D003567 ORTHO05D004117 5.1e-48 195.7 311 40.5
PSO170G0922 Papaver somniferum HOM05D003567 ORTHO05D004117 1.1e-47 194.5 291 39.9
ECA246G0369 Erigeron canadensis HOM05D003567 ORTHO05D004117 4.3e-47 192.6 298 39.9
Lj9A677G34 Lonicera japonica HOM05D003567 ORTHO05D004117 3.7e-46 189.5 290 40.0
CAN.G566.56 Capsicum annuum HOM05D003567 ORTHO05D004117 8.2e-46 188.3 269 43.1
Migut.L01511 Erythranthe guttata HOM05D003567 ORTHO05D004117 2.0e-44 183.7 288 42.4
Peaxi162Scf00071g00838 Petunia axillaris HOM05D003567 ORTHO05D004117 2.2e-43 180.3 267 41.6
SGA_v2.0_scaffold21G09406 Striga asiatica HOM05D003567 ORTHO05D004117 2.5e-42 176.8 316 40.2
ClCG03G016600 Citrullus lanatus HOM05D003567 ORTHO05D004117 3.2e-42 176.4 320 34.7
Gohir.D11G270600 Gossypium hirsutum HOM05D003567 ORTHO05D004117 1.6e-41 174.1 332 33.4
Gorai.007G291100 Gossypium raimondii HOM05D003567 ORTHO05D004117 1.6e-41 174.1 332 33.4
A09p05230 Brassica napus HOM05D003567 ORTHO05D004117 2.1e-41 173.7 328 34.1
TAR362G0113 Trochodendron aralioides HOM05D003567 ORTHO05D004117 2.1e-41 173.7 312 34.3
BraA09t36162Z Brassica rapa HOM05D003567 ORTHO05D004117 3.6e-41 172.9 328 33.8
Aa31LG11G9050 Aethionema arabicum HOM05D003567 ORTHO05D004117 4.6e-41 172.6 328 32.0
Atru.chr2.536 Acer truncatum HOM05D003567 ORTHO05D004117 1.0e-40 171.4 314 34.4
BcaB04g19661 Brassica carinata HOM05D003567 ORTHO05D004117 1.0e-40 171.4 328 33.5
HanXRQChr12g0379821 Helianthus annuus HOM05D003567 ORTHO05D004117 1.0e-40 171.4 278 36.7
THA.LOC104802813 Tarenaya hassleriana HOM05D003567 ORTHO05D004117 1.0e-40 171.4 313 34.5
Thecc.05G296900 Theobroma cacao HOM05D003567 ORTHO05D004117 3.0e-40 169.9 332 32.2
BolC9t53498H Brassica oleracea HOM05D003567 ORTHO05D004117 3.9e-40 169.5 328 33.5
Duzib177G1144 Durio zibethinus HOM05D003567 ORTHO05D004117 5.1e-40 169.1 315 33.3
SGA_v2.0_scaffold21G09407 Striga asiatica HOM05D003567 ORTHO05D004117 5.1e-40 169.1 325 33.8
C09p05690 Brassica napus HOM05D003567 ORTHO05D004117 8.8e-40 168.3 328 33.5
COL.COLO4_13563 Corchorus olitorius HOM05D003567 ORTHO05D004117 8.8e-40 168.3 334 32.6
Eucgr.H04431 Eucalyptus grandis HOM05D003567 ORTHO05D004117 8.8e-40 168.3 314 34.4
Aqoxy2G03161 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 1.1e-39 167.9 314 35.7
BcaC04g23687 Brassica carinata HOM05D003567 ORTHO05D004117 1.1e-39 167.9 328 33.5
AUR62005073 Chenopodium quinoa HOM05D003567 ORTHO05D004117 1.5e-39 167.5 314 32.8
Ciclev10001775m.g Citrus clementina HOM05D003567 ORTHO05D004117 1.5e-39 167.5 314 33.4
MD04G1212700 Malus domestica HOM05D003567 ORTHO05D004117 1.5e-39 167.5 314 33.8
Sabra13G0029300 Salix brachista HOM05D003567 ORTHO05D004117 1.5e-39 167.5 324 32.4
SalBow1G3301 Salvia bowleyana HOM05D003567 ORTHO05D004117 1.5e-39 167.5 339 33.3
CSS0000473 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 2.0e-39 167.2 330 32.7
CSS0010999 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 2.0e-39 167.2 330 32.7
Manes.08G124900 Manihot esculenta HOM05D003567 ORTHO05D004117 2.0e-39 167.2 325 32.6
PSO170G0105 Papaver somniferum HOM05D003567 ORTHO05D004117 2.0e-39 167.2 337 32.6
PGR031G0264 Punica granatum HOM05D003567 ORTHO05D004117 2.0e-39 167.2 330 33.6
PGSC0003DMG400010083 Solanum tuberosum HOM05D003567 ORTHO05D004117 2.5e-39 166.8 311 32.2
BcaB04g19664 Brassica carinata HOM05D003567 ORTHO05D004117 3.3e-39 166.4 328 32.9
BcaC04g23684 Brassica carinata HOM05D003567 ORTHO05D004117 3.3e-39 166.4 328 32.9
Cpa.g.sc84.115 Carica papaya HOM05D003567 ORTHO05D004117 3.3e-39 166.4 347 32.9
Lj1g0016651 Lotus japonicus HOM05D003567 ORTHO05D004117 3.3e-39 166.4 314 33.4
PSO302G0249 Papaver somniferum HOM05D003567 ORTHO05D004117 3.3e-39 166.4 320 35.0
Sopen02g034720 Solanum pennellii HOM05D003567 ORTHO05D004117 4.3e-39 166.0 311 32.2
CDE05G1895 Ceratophyllum demersum HOM05D003567 ORTHO05D004117 5.7e-39 165.6 314 33.4
VMungo0540G1876 Vigna mungo HOM05D003567 ORTHO05D004117 5.7e-39 165.6 314 33.1
CANSAT54G0395 Cannabis sativa HOM05D003567 ORTHO05D004117 7.4e-39 165.2 314 33.4
Rhsim05G0146400 Rhododendron simsii HOM05D003567 ORTHO05D004117 7.4e-39 165.2 315 33.3
Sp2g20530 Schrenkiella parvula HOM05D003567 ORTHO05D004117 9.7e-39 164.9 335 32.8
arahy.Tifrunner.gnm1.ann1.BBX3WJ Arachis hypogaea HOM05D003567 ORTHO05D004117 1.3e-38 164.5 317 32.5
Thhalv10004533m.g Eutrema salsugineum HOM05D003567 ORTHO05D004117 1.3e-38 164.5 325 32.3
Potri.013G029000 Populus trichocarpa HOM05D003567 ORTHO05D004117 1.7e-38 164.1 324 31.8
Migut.L01512 Erythranthe guttata HOM05D003567 ORTHO05D004117 2.8e-38 163.3 311 33.4
FvH4_6g04940 Fragaria vesca HOM05D003567 ORTHO05D004117 2.8e-38 163.3 314 32.2
arahy.Tifrunner.gnm1.ann1.86SZEE Arachis hypogaea HOM05D003567 ORTHO05D004117 3.7e-38 162.9 317 32.5
RcHm_v2.0_Chr3g0453431 Rosa chinensis HOM05D003567 ORTHO05D004117 3.7e-38 162.9 314 32.5
Carub.0006s2522 Capsella rubella HOM05D003567 ORTHO05D004117 8.2e-38 161.8 335 31.3
GSVIVG01022011001 Vitis vinifera HOM05D003567 ORTHO05D004117 8.2e-38 161.8 331 32.3
AL6G39790 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 1.1e-37 161.4 335 31.3
Ca_09384_v3 Cicer arietinum L. HOM05D003567 ORTHO05D004117 1.8e-37 160.6 314 32.8
Glyma.03G241900 Glycine max HOM05D003567 ORTHO05D004117 1.8e-37 160.6 314 32.8
CAN.G836.16 Capsicum annuum HOM05D003567 ORTHO05D004117 2.4e-37 160.2 311 31.8
Lalb_Chr18g0045341 Lupinus albus HOM05D003567 ORTHO05D004117 2.4e-37 160.2 314 32.2
Os01g0382700 Oryza sativa ssp. japonica HOM05D003567 ORTHO05D004117 3.1e-37 159.8 322 32.9
ATR0487G007 Amborella trichopoda HOM05D003567 ORTHO05D004117 6.9e-37 158.7 313 34.5
AT5G27290 Arabidopsis thaliana HOM05D003567 ORTHO05D004117 6.9e-37 158.7 335 31.3
Nitab4.5_0000027g0510 Nicotiana tabacum HOM05D003567 ORTHO05D004117 6.9e-37 158.7 251 40.2
Oeu025239.1 Olea europaea HOM05D003567 ORTHO05D004117 6.9e-37 158.7 354 31.1
PSO302G0281 Papaver somniferum HOM05D003567 ORTHO05D004117 6.9e-37 158.7 328 32.6
CARHR185910 Cardamine hirsuta HOM05D003567 ORTHO05D004117 9.1e-37 158.3 328 31.1
Hund07025 Selenicereus undatus HOM05D003567 ORTHO05D004117 9.1e-37 158.3 325 32.0
CsaV3_1G039400 Cucumis sativus L. HOM05D003567 ORTHO05D004117 1.2e-36 157.9 315 33.0
Nn3g21224 Nelumbo nucifera HOM05D003567 ORTHO05D004117 1.2e-36 157.9 337 31.8
Nitab4.5_0008257g0040 Nicotiana tabacum HOM05D003567 ORTHO05D004117 1.2e-36 157.9 318 31.8
Phvul.006G095900 Phaseolus vulgaris HOM05D003567 ORTHO05D004117 1.2e-36 157.9 311 33.4
Cc02_g32800 Coffea canephora HOM05D003567 ORTHO05D004117 1.5e-36 157.5 314 32.5
TPR.G21793 Trifolium pratense HOM05D003567 ORTHO05D004117 1.5e-36 157.5 315 33.0
Psat3g009280 Pisum sativum HOM05D003567 ORTHO05D004117 2.0e-36 157.1 314 31.8
DCAR_016974 Daucus carota HOM05D003567 ORTHO05D004117 2.6e-36 156.8 316 32.6
QL03p002916 Quercus lobata HOM05D003567 ORTHO05D004117 2.6e-36 156.8 351 31.3
Cfa006520 Carpinus fangiana HOM05D003567 ORTHO05D004117 7.7e-36 155.2 317 31.5
Medtr7g114070 Medicago truncatula HOM05D003567 ORTHO05D004117 7.7e-36 155.2 315 31.7
Sed0017789 Sechium edule HOM05D003567 ORTHO05D004117 7.7e-36 155.2 315 31.4
AUR62000902 Chenopodium quinoa HOM05D003567 ORTHO05D004117 1.3e-35 154.5 283 33.2
PSO170G3637 Papaver somniferum HOM05D003567 ORTHO05D004117 1.3e-35 154.5 325 32.0
FAN14G3462 Fragaria x ananassa HOM05D003567 ORTHO05D004117 1.7e-35 154.1 314 31.2
HanXRQChr16g0512311 Helianthus annuus HOM05D003567 ORTHO05D004117 2.2e-35 153.7 310 31.0
Sc06g0003450 Simmondsia chinensis HOM05D003567 ORTHO05D004117 2.9e-35 153.3 314 32.5
unitig_578.g16416 Utricularia gibba HOM05D003567 ORTHO05D004117 2.9e-35 153.3 316 31.6
QL03p003527 Quercus lobata HOM05D003567 ORTHO05D004117 3.8e-35 152.9 356 31.2
EL10Ac4g09285 Beta vulgaris HOM05D003567 ORTHO05D004117 1.4e-34 151.0 322 31.1
DCAR_003305 Daucus carota HOM05D003567 ORTHO05D004117 3.2e-34 149.8 304 34.2
ECA246G1301 Erigeron canadensis HOM05D003567 ORTHO05D004117 4.2e-34 149.4 317 30.9
ClCG03G016590 Citrullus lanatus HOM05D003567 ORTHO05D004117 1.0e-32 144.8 315 31.1
Lsat_1_v5_gn_5_38921 Lactuca sativa HOM05D003567 ORTHO05D004117 6.7e-32 142.1 314 29.9
Peaxi162Scf00338g00312 Petunia axillaris HOM05D003567 ORTHO05D004117 3.3e-31 139.8 271 32.5
Lj9A677T42 Lonicera japonica HOM05D003567 ORTHO05D004117 7.4e-31 138.7 339 29.8
Cc02_g32780 Coffea canephora HOM05D003567 ORTHO05D004117 9.7e-31 138.3 207 38.6
SEGI_02572 Sequoiadendron giganteum HOM05D003567 ORTHO05D004117 2.2e-30 137.1 314 29.9
Glyma.19G239300 Glycine max HOM05D003567 ORTHO05D004117 4.8e-30 136.0 188 37.8
Rhsim07G0178200 Rhododendron simsii HOM05D003567 ORTHO05D004117 8.2e-30 135.2 179 46.4
Nitab4.5_0000327g0090 Nicotiana tabacum HOM05D003567 ORTHO05D004117 1.1e-29 134.8 316 28.8
SalBow1G7230 Salvia bowleyana HOM05D003567 ORTHO05D004117 3.1e-29 133.3 289 36.7
Actinidia19813 Actinidia chinensis HOM05D003567 ORTHO05D004117 1.5e-28 131.0 243 35.4
Haze_04266 Corylus avellana HOM05D003567 ORTHO05D004117 2.6e-28 130.2 371 27.5
CiPaw.08G174300 Carya illinoinensis HOM05D003567 ORTHO05D004117 5.0e-27 125.9 170 38.8
SMO367G0890 Selaginella moellendorffii HOM05D003567 ORTHO05D004117 2.5e-26 123.6 174 39.1
Solyc02g090020.4 Solanum lycopersicum HOM05D003567 ORTHO05D004117 2.5e-26 123.6 263 33.5
CiPaw.08G174900 Carya illinoinensis HOM05D003567 ORTHO05D004117 2.1e-25 120.6 288 29.5
CsaV3_1G039390 Cucumis sativus L. HOM05D003567 ORTHO05D004117 3.6e-25 119.8 205 37.6
vmacro19654 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 4.7e-25 119.4 411 25.5
MELO3C015365.2 Cucumis melo HOM05D003567 ORTHO05D004117 1.0e-24 118.2 332 28.3
PSO302G0180 Papaver somniferum HOM05D003567 ORTHO05D004117 3.9e-24 116.3 283 30.7
Sopen08g012740 Solanum pennellii HOM05D003567 ORTHO05D004117 6.7e-24 115.5 187 41.2
vmacro05046 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 1.5e-23 114.4 200 38.0
Pp3c5_10750 Physcomitrium patens HOM05D003567 ORTHO05D004117 4.4e-23 112.8 256 31.2
AagrBONN_evm.TU.Sc2ySwM_344.4623 Anthoceros agrestis HOM05D003567 ORTHO05D004117 5.7e-23 112.5 167 35.3
CBR_g53664 Chara braunii HOM05D003567 ORTHO05D004117 1.3e-22 111.3 324 26.5
MELO3C029313.2 Cucumis melo HOM05D003567 ORTHO05D004117 1.7e-22 110.9 105 52.4
Mapoly0059s0075 Marchantia polymorpha HOM05D003567 ORTHO05D004117 1.4e-21 107.8 174 33.3
Sopen08g012750 Solanum pennellii HOM05D003567 ORTHO05D004117 7.0e-21 105.5 139 42.4
AUR62033882 Chenopodium quinoa HOM05D003567 ORTHO05D004117 3.5e-20 103.2 222 32.0
MELO3C029314.2 Cucumis melo HOM05D003567 ORTHO05D004117 3.5e-20 103.2 205 35.1
PRCOL_00003025 Prasinoderma coloniale HOM05D003567 ORTHO05D004117 1.5e-18 97.8 169 34.3
MCO11G582 Micromonas commoda HOM05D003567 ORTHO05D004117 4.2e-18 96.3 170 31.2
CiPaw.08G171000 Carya illinoinensis HOM05D003567 ORTHO05D004117 5.5e-18 95.9 142 35.9
CiPaw.08G171500 Carya illinoinensis HOM05D003567 ORTHO05D004117 7.2e-18 95.5 165 32.7
Lsat_1_v5_gn_5_39020 Lactuca sativa HOM05D003567 ORTHO05D004117 7.2e-18 95.5 164 38.4
Gohir.A11G260300 Gossypium hirsutum HOM05D003567 ORTHO05D004117 1.8e-16 90.9 196 32.7
Dinv22925 Davidia involucrata HOM05D003567 ORTHO05D004117 5.2e-16 89.4 219 30.1
AUR62025002 Chenopodium quinoa HOM05D003567 ORTHO05D004117 8.8e-16 88.6 159 31.4
AUR62030520 Chenopodium quinoa HOM05D003567 ORTHO05D004117 8.8e-16 88.6 159 31.4
AUR62032573 Chenopodium quinoa HOM05D003567 ORTHO05D004117 8.8e-16 88.6 159 31.4
AUR62037588 Chenopodium quinoa HOM05D003567 ORTHO05D004117 8.8e-16 88.6 159 31.4
Cre01.g055412 Chlamydomonas reinhardtii HOM05D003567 ORTHO05D004117 1.5e-15 87.8 164 28.7
Manes.09G161401 Manihot esculenta HOM05D003567 ORTHO05D004117 2.0e-15 87.4 93 45.2
AUR62026190 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.8e-14 83.6 99 42.4
Prupe.6G333000 Prunus persica HOM05D003567 ORTHO05D004117 3.7e-14 83.2 196 30.1
MSTRG.10546 Avicennia marina HOM05D003567 ORTHO05D004117 1.1e-13 81.6 115 40.9
CiPaw.08G170300 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.4e-13 81.3 198 30.8
AUR62043825 Chenopodium quinoa HOM05D003567 ORTHO05D004117 3.5e-12 76.6 170 28.2
Duzib128G1838 Durio zibethinus HOM05D003567 ORTHO05D004117 7.7e-12 75.5 88 38.6
CiPaw.08G169100 Carya illinoinensis HOM05D003567 ORTHO05D004117 3.8e-11 73.2 144 29.9
CBR_g22370 Chara braunii HOM05D003567 ORTHO05D004117 3.8e-11 73.2 207 28.0
Zm00001eb131930 Zea mays HOM05D003567 ORTHO05D004117 1.0e-08 65.1 153 32.7
Cc02_g32790 Coffea canephora HOM05D003567 ORTHO05D004117 2.3e-08 63.9 67 50.7
Lsat_1_v5_gn_5_38361 Lactuca sativa HOM05D003567 ORTHO05D004117 1.2e-07 61.6 59 45.8
AT1G56180 Arabidopsis thaliana HOM05D007284 ORTHO05D009303 4.4e-07 59.7 175 25.1
Mapoly0080s0063 Marchantia polymorpha HOM05D007284 ORTHO05D009303 9.8e-07 58.5 175 22.9
CiPaw.08G169600 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.3e-06 58.2 85 37.6
CiPaw.08G176400 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.3e-06 58.2 85 37.6
Ah.01g016620 Amaranthus hybridus HOM05D003567 ORTHO05D004117 3.7e-06 56.6 52 46.2


User provided reference genes

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