Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 3.6e-106 388.3 195 100.0
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 6.7e-89 330.9 195 88.2
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 9.4e-83 310.5 200 83.0
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 1.0e-81 307.0 200 81.5
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 1.4e-81 306.6 195 84.1
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 1.8e-81 306.2 196 84.7
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 8.8e-81 303.9 200 81.0
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 2.0e-80 302.8 195 83.1
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 2.0e-80 302.8 195 83.1
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 7.5e-80 300.8 196 83.7
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 2.8e-79 298.9 195 84.6
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 1.0e-73 280.4 203 77.3
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 9.8e-72 273.9 193 75.1
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 2.3e-60 236.1 204 62.7
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 4.1e-54 215.3 204 59.3
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 3.5e-53 212.2 153 71.2
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 3.5e-53 212.2 153 71.2
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 1.0e-52 210.7 195 60.0
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 2.3e-52 209.5 112 85.7
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.3e-52 209.5 196 59.2
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 6.6e-52 208.0 111 85.6
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 6.6e-52 208.0 153 69.9
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 8.6e-52 207.6 134 75.4
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 8.6e-52 207.6 134 75.4
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.1e-51 207.2 112 85.7
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 1.1e-51 207.2 126 77.8
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.5e-51 206.8 202 57.9
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 3.3e-51 205.7 138 71.7
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 3.3e-51 205.7 195 58.5
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 3.3e-51 205.7 198 58.1
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 5.6e-51 204.9 112 83.0
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 5.6e-51 204.9 142 71.1
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 5.6e-51 204.9 142 71.1
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 5.6e-51 204.9 133 75.9
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 9.5e-51 204.1 125 76.0
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 9.5e-51 204.1 111 83.8
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 1.2e-50 203.8 120 80.0
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 1.2e-50 203.8 125 78.4
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.1e-50 203.0 120 80.0
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 2.1e-50 203.0 164 64.0
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 2.1e-50 203.0 111 82.9
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 2.1e-50 203.0 199 56.8
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 2.8e-50 202.6 137 73.0
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 2.8e-50 202.6 124 75.8
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-50 202.2 126 78.6
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-50 202.2 126 78.6
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 3.6e-50 202.2 112 82.1
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 3.6e-50 202.2 190 57.9
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 4.7e-50 201.8 199 57.8
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 4.7e-50 201.8 142 68.3
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 6.2e-50 201.4 163 64.4
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 8.1e-50 201.1 196 58.7
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 1.1e-49 200.7 140 71.4
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 1.1e-49 200.7 187 58.3
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 1.8e-49 199.9 203 58.1
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.8e-49 199.9 197 57.4
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 3.1e-49 199.1 194 58.8
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 4.0e-49 198.7 199 57.3
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 5.2e-49 198.4 126 73.8
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 5.2e-49 198.4 198 56.1
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 5.2e-49 198.4 197 55.8
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 8.9e-49 197.6 192 54.7
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 1.2e-48 197.2 192 56.2
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 1.2e-48 197.2 142 68.3
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 2.0e-48 196.4 141 68.1
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 2.0e-48 196.4 196 56.1
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.6e-48 196.1 127 74.8
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 4.4e-48 195.3 194 57.2
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 4.4e-48 195.3 205 56.6
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 5.8e-48 194.9 194 54.1
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 7.5e-48 194.5 194 55.7
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 1.3e-47 193.7 190 58.4
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.3e-47 193.7 193 54.9
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 2.2e-47 193.0 142 66.9
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.2e-47 193.0 186 57.0
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 2.2e-47 193.0 111 80.2
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 2.2e-47 193.0 111 81.1
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 2.2e-47 193.0 111 81.1
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 2.2e-47 193.0 111 81.1
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 2.9e-47 192.6 200 55.5
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 4.9e-47 191.8 136 68.4
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 1.1e-46 190.7 204 53.4
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 1.4e-46 190.3 129 72.1
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 3.2e-46 189.1 198 55.1
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 3.2e-46 189.1 112 77.7
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 7.1e-46 188.0 203 52.2
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 9.2e-46 187.6 162 58.0
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.2e-45 187.2 111 74.8
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.2e-45 187.2 129 69.8
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 2.7e-45 186.0 215 51.2
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 2.7e-45 186.0 129 69.0
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 3.5e-45 185.7 206 52.9
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 6.0e-45 184.9 153 60.8
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 6.0e-45 184.9 113 76.1
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 3.0e-44 182.6 111 73.0
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 3.9e-44 182.2 178 56.2
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 6.6e-44 181.4 111 72.1
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 6.6e-44 181.4 126 68.3
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.9e-43 179.9 206 50.5
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 3.3e-43 179.1 178 56.2
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 9.5e-43 177.6 145 59.3
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 1.6e-42 176.8 129 65.9
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 3.6e-42 175.6 145 57.9
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 4.7e-42 175.3 111 70.3
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 6.2e-42 174.9 119 68.1
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 5.2e-41 171.8 94 81.9
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 2.0e-40 169.9 171 55.6
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 5.8e-40 168.3 182 52.2
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 5.8e-40 168.3 152 57.2
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 1.7e-39 166.8 144 57.6
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 2.2e-39 166.4 148 55.4
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 4.9e-39 165.2 89 85.4
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 4.9e-39 165.2 110 67.3
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 1.1e-38 164.1 110 68.2
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.1e-38 164.1 120 64.2
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 7.1e-38 161.4 116 60.3
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 7.1e-38 161.4 108 67.6
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 6.0e-37 158.3 106 70.8
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 9.6e-35 151.0 108 69.4
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 3.6e-34 149.1 108 63.9
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 8.1e-34 147.9 164 51.8
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 2.7e-29 132.9 125 50.4
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 5.6e-27 125.2 159 42.1
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 2.0e-24 116.7 138 46.4
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 9.9e-24 114.4 152 46.1
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 3.0e-20 102.8 136 41.2
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 7.9e-13 78.2 80 48.8


User provided reference genes

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