Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.8e-201 705.7 356 100.0
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 4.7e-181 637.9 356 89.6
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 6.0e-176 620.9 355 88.5
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 8.9e-172 607.1 357 87.1
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 1.5e-171 606.3 351 87.2
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.3e-170 603.2 350 88.0
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 3.7e-170 601.7 356 85.7
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 2.4e-169 599.0 350 87.1
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 5.4e-169 597.8 350 86.9
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 3.0e-167 592.0 351 86.0
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 5.1e-167 591.3 351 86.6
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 5.1e-167 591.3 351 86.6
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 4.6e-144 515.0 376 71.0
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 7.9e-136 487.6 350 72.0
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 5.9e-115 418.3 357 63.9
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 1.7e-114 416.8 338 63.3
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.1e-113 414.1 301 68.8
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 4.2e-113 412.1 350 61.7
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 9.4e-113 411.0 293 68.3
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 1.2e-112 410.6 293 68.6
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 1.6e-112 410.2 295 69.8
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 3.6e-112 409.1 350 60.9
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 6.1e-112 408.3 347 62.8
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.3e-109 400.6 329 62.3
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 1.7e-109 400.2 296 67.6
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 2.2e-109 399.8 307 65.1
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 4.8e-109 398.7 297 67.0
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 1.8e-108 396.7 343 59.8
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 5.3e-108 395.2 351 60.1
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 5.3e-108 395.2 343 60.9
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 6.9e-108 394.8 321 64.2
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.1e-108 394.4 356 60.7
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 9.1e-108 394.4 350 59.7
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.5e-107 393.7 309 64.7
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 2.6e-107 392.9 350 59.1
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 3.4e-107 392.5 366 59.0
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 7.7e-107 391.3 313 63.9
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 1.3e-106 390.6 331 60.7
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 8.5e-106 387.9 321 63.6
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.1e-105 387.5 321 63.6
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.1e-105 387.5 343 59.8
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.1e-105 387.5 289 67.8
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.4e-105 387.1 305 64.6
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 1.4e-105 387.1 349 59.3
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 1.9e-105 386.7 344 60.2
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.9e-105 386.7 305 64.3
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 3.2e-105 386.0 283 66.1
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 7.2e-105 384.8 417 52.5
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 9.4e-105 384.4 330 61.5
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 4.7e-104 382.1 329 60.2
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 1.0e-103 380.9 326 60.4
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.4e-103 380.6 297 65.7
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 1.8e-103 380.2 338 57.7
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 3.9e-103 379.0 282 66.7
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 8.8e-103 377.9 282 65.6
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.5e-102 377.1 314 61.8
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 1.3e-101 374.0 296 65.5
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 2.2e-101 373.2 282 64.9
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 2.8e-101 372.9 282 64.9
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 3.1e-100 369.4 316 61.7
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.6e-99 367.1 282 64.2
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 2.0e-99 366.7 378 56.1
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 4.5e-99 365.5 282 65.2
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.7e-98 363.6 282 64.2
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 1.7e-98 363.6 314 60.5
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 3.8e-98 362.5 289 62.3
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 1.1e-97 360.9 282 65.2
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 3.2e-97 359.4 290 63.1
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 4.2e-97 359.0 295 62.7
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 9.4e-97 357.8 315 59.7
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 4.7e-96 355.5 312 59.9
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.3e-95 353.2 317 59.6
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 2.0e-94 350.1 288 63.2
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 7.5e-94 348.2 295 61.4
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 1.7e-93 347.1 331 55.6
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 2.8e-93 346.3 294 59.2
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.7e-93 345.9 339 54.3
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 1.3e-90 337.4 328 55.5
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.9e-89 333.6 327 54.4
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 4.2e-89 332.4 293 58.7
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 9.4e-89 331.3 310 56.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.1e-84 317.8 351 51.0
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 4.1e-84 315.8 246 65.4
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 2.7e-83 313.2 248 62.1
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 5.0e-82 308.9 283 56.5
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 1.6e-80 303.9 288 56.2
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 4.7e-80 302.4 321 52.6
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.7e-78 295.4 276 58.0
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.3e-74 284.3 345 49.0
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.6e-74 282.0 291 54.0
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 4.3e-73 279.3 200 67.5
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.4e-71 274.2 300 52.0
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.8e-71 273.9 297 47.8
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 5.7e-70 268.9 262 53.4
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.4e-68 264.2 310 46.5
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 1.5e-65 254.2 323 45.5
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 3.6e-64 249.6 305 43.6
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.1e-52 211.5 172 61.0
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 2.1e-51 207.2 227 47.1
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.1e-47 194.9 166 60.8
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 2.3e-47 193.7 290 39.0
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 2.6e-46 190.3 137 65.0
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 2.6e-46 190.3 156 60.3
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.2e-38 164.9 381 33.1
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 8.7e-34 148.7 163 47.9
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.5e-33 147.9 305 35.7
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 6.7e-26 122.5 147 45.6
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.2e-21 107.5 70 68.6
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 2.7e-19 100.5 101 51.5
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 8.7e-18 95.5 130 43.1
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 2.5e-12 77.4 153 34.6
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 1.8e-07 61.2 164 31.7
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 2.4e-07 60.8 131 34.4
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.1e-07 60.1 149 29.5
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 4.1e-07 60.1 170 32.4
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 4.1e-07 60.1 170 32.4
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 4.1e-07 60.1 170 32.4
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 5.3e-07 59.7 243 27.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 6.9e-07 59.3 244 27.0
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.0e-07 58.9 62 50.0
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.0e-07 58.9 62 50.0
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 1.2e-06 58.5 182 29.1
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.5e-06 58.2 149 29.5
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 2.0e-06 57.8 149 29.5
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 2.0e-06 57.8 175 30.9
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 2.0e-06 57.8 213 28.2
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 3.4e-06 57.0 177 31.1
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 4.5e-06 56.6 179 29.6
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 5.9e-06 56.2 151 29.1
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 5.9e-06 56.2 174 31.6
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 5.9e-06 56.2 253 25.7
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 5.9e-06 56.2 180 31.7
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 5.9e-06 56.2 182 30.2
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 5.9e-06 56.2 244 27.0
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 5.9e-06 56.2 151 30.5
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 7.6e-06 55.8 253 26.1


User provided reference genes

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