Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g29900 Schrenkiella parvula HOM05D001817 ORTHO05D001647 3.2e-74 281.6 134 100.0
SpUn0983_0020 Schrenkiella parvula HOM05D001817 ORTHO05D001647 4.0e-48 194.9 95 91.6
AT4G32105 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 2.0e-36 156.0 133 57.9
Carub.0007s0845 Capsella rubella HOM05D001817 ORTHO05D001647 7.8e-36 154.1 133 56.4
AL7G19750 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 1.3e-35 153.3 133 56.4
AT4G32110 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 1.3e-35 153.3 133 56.4
Thhalv10027525m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 1.3e-35 153.3 134 57.5
BolC1t00680H Brassica oleracea HOM05D001817 ORTHO05D001647 1.6e-33 146.4 135 56.3
CARHR240020 Cardamine hirsuta HOM05D001817 ORTHO05D001647 2.0e-31 139.4 134 53.7
AL7G19780 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 2.6e-31 139.0 102 60.8
Thhalv10027554m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 9.5e-26 120.6 135 50.4
AT4G32100 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 5.8e-23 111.3 137 48.9
Thhalv10001075m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 9.8e-23 110.5 135 45.2
Sp2g10660 Schrenkiella parvula HOM05D001817 ORTHO05D001647 8.3e-22 107.5 133 48.1
BraA01t00587Z Brassica rapa HOM05D001817 ORTHO05D001647 1.4e-21 106.7 135 43.0
AL7G19790 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 1.9e-21 106.3 139 46.8
A01p06200 Brassica napus HOM05D001817 ORTHO05D001647 4.1e-21 105.1 137 43.1
BolC1t00681H Brassica oleracea HOM05D001817 ORTHO05D001647 4.1e-21 105.1 137 43.8
C01p06840 Brassica napus HOM05D001817 ORTHO05D001647 5.4e-21 104.8 137 43.1
A06p46400 Brassica napus HOM05D001817 ORTHO05D001647 7.1e-21 104.4 130 43.8
C01p07490 Brassica napus HOM05D001817 ORTHO05D001647 7.1e-21 104.4 131 42.0
BraA06t27504Z Brassica rapa HOM05D001817 ORTHO05D001647 7.1e-21 104.4 130 43.8
BcaB07g30433 Brassica carinata HOM05D001817 ORTHO05D001647 9.2e-21 104.0 127 48.8
BcaNung03138 Brassica carinata HOM05D001817 ORTHO05D001647 9.2e-21 104.0 135 42.2
Sp2g10630 Schrenkiella parvula HOM05D001817 ORTHO05D001647 2.7e-20 102.4 132 42.4
A01p06730 Brassica napus HOM05D001817 ORTHO05D001647 6.0e-20 101.3 135 40.7
A02p29300 Brassica napus HOM05D001817 ORTHO05D001647 7.8e-20 100.9 127 47.2
C07p29020 Brassica napus HOM05D001817 ORTHO05D001647 1.0e-19 100.5 130 42.3
BolC7t43441H Brassica oleracea HOM05D001817 ORTHO05D001647 1.0e-19 100.5 130 42.3
BcaB07g30432 Brassica carinata HOM05D001817 ORTHO05D001647 1.3e-19 100.1 125 44.8
BcaC03g16785 Brassica carinata HOM05D001817 ORTHO05D001647 1.7e-19 99.8 125 45.6
Thhalv10001150m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 1.7e-19 99.8 94 52.1
BcaC06g31519 Brassica carinata HOM05D001817 ORTHO05D001647 5.1e-19 98.2 130 43.8
A02p29320 Brassica napus HOM05D001817 ORTHO05D001647 6.6e-19 97.8 125 44.8
BcaC03g16784 Brassica carinata HOM05D001817 ORTHO05D001647 1.1e-18 97.1 127 45.7
C02p46580 Brassica napus HOM05D001817 ORTHO05D001647 1.1e-18 97.1 125 44.8
THA.LOC104818605 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 1.1e-18 97.1 131 40.5
THA.LOC104818607 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 1.1e-18 97.1 131 40.5
THA.LOC104818611 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 1.1e-18 97.1 131 40.5
A02p29330 Brassica napus HOM05D001817 ORTHO05D001647 1.5e-18 96.7 125 44.0
C02p46550 Brassica napus HOM05D001817 ORTHO05D001647 1.5e-18 96.7 127 45.7
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 9.5e-18 94.0 134 38.8
BcaC09g51999 Brassica carinata HOM05D000316 ORTHO05D001978 1.2e-17 93.6 110 44.5
C01p06830 Brassica napus HOM05D001817 ORTHO05D001647 2.1e-17 92.8 98 45.9
FvH4_2g28690 Fragaria vesca HOM05D001817 ORTHO05D001647 2.1e-17 92.8 101 41.6
FvH4_2g28701 Fragaria vesca HOM05D001817 ORTHO05D001647 6.2e-17 91.3 102 40.2
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 6.2e-17 91.3 130 40.0
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 6.2e-17 91.3 130 40.0
FAN24G3294 Fragaria x ananassa HOM05D001817 ORTHO05D001647 8.1e-17 90.9 102 40.2
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 8.1e-17 90.9 101 42.6
BcaC06g34407 Brassica carinata HOM05D001817 ORTHO05D001647 1.4e-16 90.1 102 46.1
BcaC09g51932 Brassica carinata HOM05D001817 ORTHO05D001647 3.1e-16 89.0 104 41.3
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 6.8e-16 87.8 102 40.2
Cpa.g.sc187.6 Carica papaya HOM05D001817 ORTHO05D001647 1.5e-15 86.7 102 39.2
RcHm_v2.0_Chr6g0297461 Rosa chinensis HOM05D001817 ORTHO05D001647 1.5e-15 86.7 101 40.6
FAN27G3307 Fragaria x ananassa HOM05D000140 ORTHO05D000087 2.0e-15 86.3 106 45.3
Thecc.02G154500 Theobroma cacao HOM05D001817 ORTHO05D001647 2.6e-15 85.9 104 39.4
CiPaw.08G009300 Carya illinoinensis HOM05D001817 ORTHO05D001647 5.8e-15 84.7 101 38.6
Gohir.A13G061900 Gossypium hirsutum HOM05D001817 ORTHO05D001647 7.6e-15 84.3 104 41.3
Gohir.D13G060100 Gossypium hirsutum HOM05D001817 ORTHO05D001647 7.6e-15 84.3 104 41.3
Atru.chr6.250 Acer truncatum HOM05D001817 ORTHO05D001647 1.3e-14 83.6 112 39.3
FAN15G2483 Fragaria x ananassa HOM05D000140 ORTHO05D000087 1.3e-14 83.6 106 44.3
FAN24G1684 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.3e-14 83.6 85 43.5
FAN24G1722 Fragaria x ananassa HOM05D000140 ORTHO05D000087 1.3e-14 83.6 106 44.3
Gorai.013G068000 Gossypium raimondii HOM05D001817 ORTHO05D001647 1.3e-14 83.6 104 40.4
Glyma.09G085400 Glycine max HOM05D001817 ORTHO05D001647 1.7e-14 83.2 107 41.1
Phvul.010G051700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.7e-14 83.2 117 38.5
MD15G1128800 Malus domestica HOM05D001817 ORTHO05D001647 2.2e-14 82.8 122 39.3
Medtr2g438190 Medicago truncatula HOM05D001817 ORTHO05D001647 2.2e-14 82.8 135 35.6
BraA02t07960Z Brassica rapa HOM05D001817 ORTHO05D001647 3.7e-14 82.0 81 51.9
Glyma.17G218100 Glycine max HOM05D001817 ORTHO05D001647 3.7e-14 82.0 135 38.5
FvH4_2g27480 Fragaria vesca HOM05D001817 ORTHO05D001647 4.9e-14 81.6 134 38.8
FAN20G0384 Fragaria x ananassa HOM05D000140 ORTHO05D000087 4.9e-14 81.6 106 43.4
arahy.Tifrunner.gnm1.ann1.G1WXPY Arachis hypogaea HOM05D001817 ORTHO05D001647 6.4e-14 81.3 129 34.9
Glyma.10G186200 Glycine max HOM05D001817 ORTHO05D001647 6.4e-14 81.3 117 36.8
Atru.chr12.564 Acer truncatum HOM05D001817 ORTHO05D001647 8.4e-14 80.9 112 37.5
Haze_21486 Corylus avellana HOM05D001817 ORTHO05D001647 8.4e-14 80.9 133 37.6
Medtr0100s0140 Medicago truncatula HOM05D001817 ORTHO05D001647 8.4e-14 80.9 129 37.2
arahy.Tifrunner.gnm1.ann1.P3P3AQ Arachis hypogaea HOM05D001817 ORTHO05D001647 1.1e-13 80.5 105 38.1
BolC2t10708H Brassica oleracea HOM05D001817 ORTHO05D001647 1.1e-13 80.5 81 50.6
FAN27G0609 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.1e-13 80.5 124 34.7
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 1.1e-13 80.5 104 37.5
C01p07500 Brassica napus HOM05D001817 ORTHO05D001647 1.4e-13 80.1 117 42.7
ClCG05G016690 Citrullus lanatus HOM05D001817 ORTHO05D001647 1.4e-13 80.1 101 40.6
Glyma.07G189600 Glycine max HOM05D001817 ORTHO05D001647 1.4e-13 80.1 129 37.2
arahy.Tifrunner.gnm1.ann1.2D36J9 Arachis hypogaea HOM05D001817 ORTHO05D001647 2.4e-13 79.3 103 37.9
C02p46590 Brassica napus HOM05D001817 ORTHO05D028283 2.4e-13 79.3 100 46.0
Lalb_Chr21g0316231 Lupinus albus HOM05D001817 ORTHO05D001647 2.4e-13 79.3 127 33.9
arahy.Tifrunner.gnm1.ann1.36N5BX Arachis hypogaea HOM05D001817 ORTHO05D001647 3.2e-13 79.0 101 37.6
Duzib052G0237 Durio zibethinus HOM05D001817 ORTHO05D001647 3.2e-13 79.0 101 40.6
FAN24G2789 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.2e-13 79.0 100 38.0
Lj3g0023162 Lotus japonicus HOM05D001817 ORTHO05D001647 3.2e-13 79.0 129 38.0
Phvul.007G030500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 3.2e-13 79.0 127 34.6
Phvul.002G171300 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 4.1e-13 78.6 112 37.5
Phvul.007G030200 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 4.1e-13 78.6 127 34.6
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 4.1e-13 78.6 135 34.8
arahy.Tifrunner.gnm1.ann1.27HQCZ Arachis hypogaea HOM05D001817 ORTHO05D001647 9.2e-13 77.4 101 36.6
Eucgr.C01626 Eucalyptus grandis HOM05D001817 ORTHO05D001647 9.2e-13 77.4 106 41.5
Actinidia22324 Actinidia chinensis HOM05D001817 ORTHO05D001647 1.2e-12 77.0 101 41.6
Lj4g0011737 Lotus japonicus HOM05D001817 ORTHO05D001647 1.2e-12 77.0 135 35.6
arahy.Tifrunner.gnm1.ann1.07A84U Arachis hypogaea HOM05D001817 ORTHO05D001647 1.6e-12 76.6 105 39.0
Lj4g0027202 Lotus japonicus HOM05D001817 ORTHO05D001647 1.6e-12 76.6 135 32.6
Manes.02G218600 Manihot esculenta HOM05D001817 ORTHO05D001647 1.6e-12 76.6 137 35.8
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 2.7e-12 75.9 100 40.0
Lalb_Chr21g0316211 Lupinus albus HOM05D001817 ORTHO05D001647 2.7e-12 75.9 127 33.9
DCAR_004364 Daucus carota HOM05D001817 ORTHO05D001647 3.5e-12 75.5 128 38.3
Eucgr.L02576 Eucalyptus grandis HOM05D001817 ORTHO05D001647 3.5e-12 75.5 100 30.0
Lalb_Chr13g0294691 Lupinus albus HOM05D001817 ORTHO05D001647 3.5e-12 75.5 127 33.9
Sp2g10650 Schrenkiella parvula HOM05D001817 ORTHO05D001647 3.5e-12 75.5 131 36.6
SpUn0983_0010 Schrenkiella parvula HOM05D001817 ORTHO05D001647 3.5e-12 75.5 64 65.6
Sc06g0000520 Simmondsia chinensis HOM05D001817 ORTHO05D001647 3.5e-12 75.5 120 32.5
VMungo0331G0458 Vigna mungo HOM05D001817 ORTHO05D001647 3.5e-12 75.5 127 36.2
CsaV3_3G046190 Cucumis sativus L. HOM05D001817 ORTHO05D001647 4.6e-12 75.1 102 36.3
Glyma.08G357100 Glycine max HOM05D001817 ORTHO05D001647 4.6e-12 75.1 107 40.2
Glyma.08G316300 Glycine max HOM05D001817 ORTHO05D001647 7.8e-12 74.3 113 38.1
Lj4g0020170 Lotus japonicus HOM05D001817 ORTHO05D001647 1.0e-11 73.9 107 37.4
ClCG05G016680 Citrullus lanatus HOM05D001817 ORTHO05D001647 1.7e-11 73.2 96 36.5
Potri.006G257600 Populus trichocarpa HOM05D001817 ORTHO05D001647 3.0e-11 72.4 129 32.6
TAR629G0897 Trochodendron aralioides HOM05D001817 ORTHO05D001647 3.0e-11 72.4 104 39.4
Aqoxy5G03160 Aquilegia oxysepala HOM05D001817 ORTHO05D001647 5.1e-11 71.6 132 31.8
Sabra06G0201500 Salix brachista HOM05D001817 ORTHO05D001647 5.1e-11 71.6 130 32.3
FvH4_5g25410 Fragaria vesca HOM05D001817 ORTHO05D001647 6.6e-11 71.2 100 36.0
FAN18G2855 Fragaria x ananassa HOM05D001817 ORTHO05D001647 6.6e-11 71.2 100 36.0
Phvul.001G045800 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.1e-10 70.5 104 36.5
Eucgr.C01709 Eucalyptus grandis HOM05D001817 ORTHO05D001647 1.5e-10 70.1 100 29.0
TAR629G2934 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.5e-10 70.1 104 38.5
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.9e-10 69.7 112 33.0
FvH4_2g28680 Fragaria vesca HOM05D001817 ORTHO05D001647 3.3e-10 68.9 123 32.5
Lj4g0019656 Lotus japonicus HOM05D001817 ORTHO05D001647 3.3e-10 68.9 124 34.7
HPP92_015931 Vanilla planifolia HOM05D001817 ORTHO05D001647 3.3e-10 68.9 106 35.8
VMungo0464G1322 Vigna mungo HOM05D001817 ORTHO05D001647 4.3e-10 68.6 101 33.7
Dinv24980 Davidia involucrata HOM05D001817 ORTHO05D001647 5.6e-10 68.2 101 34.7
VMungo0464G0399 Vigna mungo HOM05D001817 ORTHO05D001647 5.6e-10 68.2 101 33.7
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea HOM05D001817 ORTHO05D001647 9.6e-10 67.4 86 39.5
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea HOM05D001817 ORTHO05D001647 9.6e-10 67.4 86 39.5
Glyma.10G114100 Glycine max HOM05D001817 ORTHO05D001647 9.6e-10 67.4 100 33.0
Phvul.009G216600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.2e-09 67.0 135 31.1
Sed0003642 Sechium edule HOM05D001817 ORTHO05D001647 1.2e-09 67.0 99 33.3
Glyma.10G113700 Glycine max HOM05D001817 ORTHO05D001647 1.6e-09 66.6 89 38.2
arahy.Tifrunner.gnm1.ann1.8W5KIC Arachis hypogaea HOM05D001817 ORTHO05D001647 2.1e-09 66.2 130 31.5
Psat0s2453g0080 Pisum sativum HOM05D001817 ORTHO05D001647 2.1e-09 66.2 103 34.0
Manes.16G124600 Manihot esculenta HOM05D001817 ORTHO05D001647 2.8e-09 65.9 105 32.4
Phvul.004G057100 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 2.8e-09 65.9 128 33.6
CANSAT25G3871 Cannabis sativa HOM05D001817 ORTHO05D001647 3.6e-09 65.5 101 33.7
Potri.004G167900 Populus trichocarpa HOM05D001817 ORTHO05D001647 3.6e-09 65.5 89 39.3
A01p06190 Brassica napus HOM05D001817 ORTHO05D001647 6.2e-09 64.7 55 50.9
COL.COLO4_18892 Corchorus olitorius HOM05D001817 ORTHO05D001647 6.2e-09 64.7 107 36.4
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 6.2e-09 64.7 98 32.7
VMungo0464G1777 Vigna mungo HOM05D001817 ORTHO05D001647 6.2e-09 64.7 112 32.1
A01p06740 Brassica napus HOM05D001817 ORTHO05D001647 8.1e-09 64.3 86 39.5
Lalb_Chr07g0186891 Lupinus albus HOM05D001817 ORTHO05D001647 8.1e-09 64.3 100 38.0
DCAR_015990 Daucus carota HOM05D001817 ORTHO05D001647 1.1e-08 63.9 103 34.0
FvH4_5g03660 Fragaria vesca HOM05D001817 ORTHO05D001647 1.1e-08 63.9 98 33.7
Lj5g0009014 Lotus japonicus HOM05D001817 ORTHO05D001647 1.1e-08 63.9 88 38.6
QL07p000821 Quercus lobata HOM05D001817 ORTHO05D001647 1.1e-08 63.9 131 32.1
HPP92_021712 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.4e-08 63.5 104 36.5
Phvul.009G216700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.8e-08 63.2 135 29.6
QL02p021022 Quercus lobata HOM05D001817 ORTHO05D001647 1.8e-08 63.2 90 35.6
HPP92_021690 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.8e-08 63.2 104 36.5
FAN04G2963 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.1e-08 62.4 88 36.4
FAN08G2754 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.1e-08 62.4 88 36.4
FAN18G1420 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.1e-08 62.4 88 36.4
TPR.G19813 Trifolium pratense HOM05D001817 ORTHO05D001647 3.1e-08 62.4 118 32.2
HPP92_021711 Vanilla planifolia HOM05D001817 ORTHO05D001647 3.1e-08 62.4 127 32.3
Os02g0511600 Oryza sativa ssp. japonica HOM05D001817 ORTHO05D001647 4.0e-08 62.0 101 37.6
FAN04G1340 Fragaria x ananassa HOM05D001817 ORTHO05D001647 5.2e-08 61.6 88 36.4
Medtr1g048300 Medicago truncatula HOM05D001817 ORTHO05D001647 6.8e-08 61.2 114 33.3
Phvul.007G239600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 6.8e-08 61.2 89 34.8
MBI18_g29804_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 8.9e-08 60.8 106 34.0
PSO675G0727 Papaver somniferum HOM05D001817 ORTHO05D001647 8.9e-08 60.8 134 29.9
Peaxi162Scf00429g00027 Petunia axillaris HOM05D028014 ORTHO05D030439 8.9e-08 60.8 132 33.3
TAR371G0865 Trochodendron aralioides HOM05D001817 ORTHO05D001647 8.9e-08 60.8 101 30.7
Glyma.13G199700 Glycine max HOM05D001817 ORTHO05D001647 1.2e-07 60.5 109 32.1
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.2e-07 60.5 104 33.7
HPP92_021691 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.5e-07 60.1 127 30.7
VMungo0720G0118 Vigna mungo HOM05D001817 ORTHO05D001647 1.5e-07 60.1 89 32.6
Lalb_Chr13g0294721 Lupinus albus HOM05D001817 ORTHO05D001647 2.6e-07 59.3 135 31.1
ATR0582G316 Amborella trichopoda HOM05D001817 ORTHO05D001647 4.4e-07 58.5 124 29.8
Lalb_Chr03g0036441 Lupinus albus HOM05D001817 ORTHO05D001647 5.8e-07 58.2 90 33.3
Zm00001eb421200 Zea mays HOM05D001817 ORTHO05D001647 7.6e-07 57.8 101 36.6
CDE05G1510 Ceratophyllum demersum HOM05D000485 ORTHO05D000341 1.3e-06 57.0 103 32.0
HanXRQChr03g0079111 Helianthus annuus HOM05D001817 ORTHO05D001647 1.7e-06 56.6 95 33.7
Sc03g0006280 Simmondsia chinensis HOM05D001817 ORTHO05D001647 1.7e-06 56.6 102 28.4
Prupe.1G484200 Prunus persica HOM05D001817 ORTHO05D001647 2.9e-06 55.8 122 33.6
Migut.E00880 Erythranthe guttata HOM05D017739 ORTHO05D001647 6.4e-06 54.7 57 42.1
Migut.E01748 Erythranthe guttata HOM05D017739 ORTHO05D001647 6.4e-06 54.7 57 42.1


User provided reference genes

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