Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 4.7e-174 614.4 299 100.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.5e-167 592.0 299 96.0
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 9.5e-167 590.1 297 96.0
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.2e-166 589.7 298 95.3
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 6.1e-166 587.4 297 95.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 8.0e-166 587.0 297 95.3
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.0e-165 585.1 298 94.0
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 4.0e-165 584.7 297 95.3
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 4.0e-165 584.7 297 95.3
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.2e-164 583.2 299 93.3
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-161 573.2 299 90.3
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 5.9e-161 570.9 322 87.9
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.5e-151 539.7 299 85.6
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 8.9e-149 530.4 298 84.6
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.3e-139 500.0 297 78.8
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.7e-139 499.6 299 78.9
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.9e-138 496.1 295 79.7
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.1e-138 494.2 298 78.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.1e-137 492.7 298 77.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.0e-136 490.3 295 78.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.0e-136 490.3 297 78.5
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.3e-136 490.0 298 77.2
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.7e-136 489.6 298 77.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.3e-136 489.2 298 78.2
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.3e-136 489.2 296 75.3
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.9e-136 488.4 294 76.5
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 5.1e-136 488.0 295 79.0
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 5.1e-136 488.0 298 77.5
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 6.6e-136 487.6 294 76.9
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 8.6e-136 487.3 298 76.8
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.5e-135 486.5 298 75.2
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.5e-135 486.5 300 76.7
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.3e-135 485.3 294 76.2
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 9.5e-135 483.8 294 76.2
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.2e-134 483.4 298 77.2
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.6e-134 483.0 298 76.2
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.7e-134 481.5 295 78.0
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 6.2e-134 481.1 297 76.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 6.2e-134 481.1 298 75.8
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.1e-133 480.3 298 75.8
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.4e-133 479.9 298 75.8
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.4e-133 479.9 286 79.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.1e-133 478.8 299 75.3
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.1e-133 478.8 299 75.3
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.0e-133 478.4 299 75.3
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 6.8e-133 477.6 298 75.8
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 8.9e-133 477.2 299 74.9
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.2e-132 476.9 296 76.0
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.2e-132 476.9 317 72.6
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.0e-132 476.1 299 74.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.6e-132 475.7 287 76.3
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.6e-132 475.7 314 72.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 3.4e-132 475.3 295 75.6
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 5.8e-132 474.6 298 75.5
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 7.6e-132 474.2 298 74.2
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-131 473.4 294 76.5
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.7e-131 473.0 295 74.9
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 3.8e-131 471.9 296 76.0
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.8e-131 471.9 298 74.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.8e-131 471.9 298 75.2
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 6.4e-131 471.1 295 74.6
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 9.2e-130 467.2 294 75.2
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.7e-129 465.7 297 74.1
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 4.6e-129 464.9 294 74.8
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 2.3e-128 462.6 314 70.1
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 8.7e-128 460.7 302 72.2
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.7e-128 460.7 302 72.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 8.7e-128 460.7 296 74.3
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 2.5e-127 459.1 299 72.6
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 8.1e-126 454.1 315 71.7
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.1e-125 453.8 271 76.8
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.1e-125 452.2 295 72.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.1e-125 452.2 294 71.4
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.1e-125 452.2 299 70.9
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.0e-125 451.8 293 72.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.0e-125 451.8 294 71.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 6.9e-125 451.1 346 63.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 3.4e-124 448.7 298 70.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 7.6e-124 447.6 294 72.1
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.2e-123 446.0 295 70.5
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.9e-122 443.0 301 71.1
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 6.0e-121 438.0 294 70.1
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.3e-120 436.8 337 65.9
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 3.3e-119 432.2 266 74.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 5.6e-119 431.4 293 69.6
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 5.6e-119 431.4 260 77.3
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 7.3e-119 431.0 295 67.8
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.6e-118 429.9 298 69.1
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.4e-117 426.8 296 67.2
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 9.9e-116 420.6 287 68.6
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.9e-114 416.4 295 68.5
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.0e-112 410.6 299 68.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.2e-108 397.1 289 65.1
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 8.2e-102 374.4 222 77.0
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.6e-97 358.6 290 57.6
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 6.0e-97 358.2 186 93.5
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 5.7e-95 351.7 284 57.7
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 5.7e-95 351.7 205 80.0
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.9e-92 341.7 286 57.3
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 6.5e-91 338.2 291 58.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 7.9e-89 331.3 200 74.5
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.1e-81 306.6 199 71.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.2e-70 270.0 166 74.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.0e-67 261.2 258 50.0
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.2e-58 228.4 149 67.1
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.8e-53 213.8 143 71.3
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 4.9e-46 189.1 147 66.0
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.8e-44 181.8 139 66.9
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-35 154.5 106 73.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 2.8e-33 146.7 97 75.3
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-31 141.0 117 62.4
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.1e-28 130.6 326 30.1
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.5e-26 123.6 71 83.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 5.8e-23 112.5 297 25.9
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 7.5e-23 112.1 73 76.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-22 110.5 74 73.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 2.9e-22 110.2 235 28.9
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.4e-21 107.1 73 68.5
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 2.6e-07 60.5 41 65.9


User provided reference genes

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