Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g03930 Schrenkiella parvula HOM05D011596 ORTHO05D000002 2.5e-83 312.0 152 100.0
SpUn0980_0010 Schrenkiella parvula HOM05D011596 ORTHO05D000002 3.7e-74 281.6 146 93.8
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.3e-34 147.9 147 50.3
Sp5g18800 Schrenkiella parvula HOM05D011596 ORTHO05D000002 2.3e-28 129.4 128 52.3
BcaB05g22502 Brassica carinata HOM05D011596 ORTHO05D000002 2.9e-23 112.5 98 56.1
BolC9t56893H Brassica oleracea HOM05D011596 ORTHO05D000002 1.1e-22 110.5 137 48.2
BcaB07g32201 Brassica carinata HOM05D011596 ORTHO05D000002 2.1e-21 106.3 110 49.1
BolC1t04627H Brassica oleracea HOM05D011596 ORTHO05D000002 2.1e-21 106.3 92 53.3
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-13 80.5 87 43.7
Ca_22397_v3 Cicer arietinum L. HOM05D019583 ORTHO05D025031 6.1e-13 78.2 63 49.2
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.0e-12 77.4 62 48.4
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.0e-12 77.4 62 50.0
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.4e-12 77.0 71 47.9
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 3.0e-12 75.9 62 48.4
BolC7t43393H Brassica oleracea HOM05D011596 ORTHO05D000002 5.2e-12 75.1 53 60.4
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.9e-12 74.3 87 39.1
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-11 73.9 62 46.8
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.5e-11 73.6 61 47.5
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.4e-11 72.4 61 45.9
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 4.4e-11 72.0 58 50.0
BcaB07g33616 Brassica carinata HOM05D000004 ORTHO05D000002 5.7e-11 71.6 58 50.0
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-11 71.6 59 50.8
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 5.7e-11 71.6 58 50.0
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-10 70.1 59 45.8
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-10 69.3 59 47.5
BcaB03g14473 Brassica carinata HOM05D000004 ORTHO05D000002 3.7e-10 68.9 57 49.1
BcaC04g19062 Brassica carinata HOM05D061053 ORTHO05D000002 3.7e-10 68.9 57 49.1
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 6.4e-10 68.2 59 47.5
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 6.4e-10 68.2 59 49.2
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.1e-09 67.4 62 50.0
ECA234G0220 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.4 61 45.9
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.4 59 44.1
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.4 59 44.1
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.4 73 37.0
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 1.4e-09 67.0 59 47.5
BcaC05g28910 Brassica carinata HOM05D019583 ORTHO05D000002 1.4e-09 67.0 53 47.2
ECA233G4737 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-09 67.0 59 42.4
ECA233G1543 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-09 66.6 59 44.1
ECA236G1497 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-09 66.6 60 43.3
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-09 66.6 90 36.7
Psat1g210200 Pisum sativum HOM05D000004 ORTHO05D000002 1.8e-09 66.6 57 47.4
PSO832G2519 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-09 66.2 86 39.5
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-09 65.9 58 44.8
ECA236G2364 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-09 65.9 59 44.1
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-09 65.9 57 43.9
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.2e-09 65.9 63 46.0
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.5 82 37.8
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.5 82 36.6
PGSC0003DMG400042551 Solanum tuberosum HOM05D023338 ORTHO05D028486 4.1e-09 65.5 58 48.3
CAN.G1642.2 Capsicum annuum HOM05D011596 ORTHO05D000002 5.4e-09 65.1 54 48.1
ECA246G1596 Erigeron canadensis HOM05D000004 ORTHO05D000048 5.4e-09 65.1 59 45.8
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-09 65.1 63 44.4
PSO724G0511 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-09 65.1 100 33.0
Atru.chr3.1983 Acer truncatum HOM05D000004 ORTHO05D000002 7.0e-09 64.7 91 37.4
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.0e-09 64.7 59 39.0
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.0e-09 64.7 55 47.3
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 9.2e-09 64.3 88 34.1
ECA232G1063 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-08 63.9 56 46.4
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.6e-08 63.5 59 44.1
ECA246G1959 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-08 63.5 68 41.2
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-08 63.2 57 42.1
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-08 62.8 97 33.0
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-08 62.4 100 34.0
CAN.G1300.6 Capsicum annuum HOM05D000004 ORTHO05D000002 4.6e-08 62.0 66 39.4
PSO210G0641 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-08 62.0 57 45.6
BcaC08g44498 Brassica carinata HOM05D000004 ORTHO05D027131 5.9e-08 61.6 53 45.3
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.9e-08 61.6 56 44.6
COL.COLO4_33175 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.8e-08 61.2 60 43.3
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.8e-08 61.2 61 41.0
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-07 60.8 61 36.1
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-07 60.8 56 39.3
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 61 41.0
ECA247G0871 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 56 39.3
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-07 60.1 59 39.0
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-07 60.1 57 42.1
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 59.7 56 41.1
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 59.7 88 31.8
COL.COLO4_36404 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.9e-07 58.9 59 42.4
PSO170G6288 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.9 88 37.5
PSO339G0831 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.9 99 35.4
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-07 58.9 70 34.3
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.0e-07 58.5 57 45.6
COL.COLO4_07267 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.0e-07 58.5 106 36.8
ECA240G3467 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-07 58.5 53 41.5
Manes.08G071733 Manihot esculenta HOM05D000004 ORTHO05D000002 5.0e-07 58.5 58 39.7
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 5.0e-07 58.5 64 35.9
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.5 64 35.9
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 6.6e-07 58.2 58 37.9
PSO675G6766 Papaver somniferum HOM05D000004 ORTHO05D000002 6.6e-07 58.2 55 43.6
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-07 57.8 58 44.8
AUR62027767 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.6e-07 57.8 47 51.1
COL.COLO4_15060 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.6e-07 57.8 60 41.7
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 8.6e-07 57.8 59 37.3
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-07 57.8 55 36.4
PSO170G5728 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-07 57.8 52 48.1
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-07 57.8 55 38.2
COL.COLO4_14043 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-06 57.4 58 43.1
COL.COLO4_30010 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-06 57.4 103 35.0
PSO017G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 84 34.5
PSO675G5993 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 99 32.3
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-06 57.0 57 45.6
COL.COLO4_25153 Corchorus olitorius HOM05D030667 ORTHO05D000002 1.5e-06 57.0 59 42.4
Sc04g0006270 Simmondsia chinensis HOM05D011596 ORTHO05D000002 1.5e-06 57.0 65 41.5
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-06 56.6 57 36.8
Nitab4.5_0000009g0180 Nicotiana tabacum HOM05D013382 ORTHO05D027131 1.9e-06 56.6 59 35.6
PSO063G4254 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 55 36.4
PSO675G6875 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 54 35.2
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 55.8 63 41.3
COL.COLO4_37053 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.3e-06 55.8 58 39.7
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 55.8 85 32.9
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 55.8 60 40.0
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 4.3e-06 55.5 62 40.3
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-06 55.5 57 35.1
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-06 55.5 59 39.0
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-06 55.5 121 27.3
PSO339G1607 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-06 55.5 99 31.3
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-06 55.5 64 34.4
Ah.15g097860 Amaranthus hybridus HOM05D012832 ORTHO05D019522 5.6e-06 55.1 62 40.3
AL3G28900 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.6e-06 55.1 53 45.3
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 5.6e-06 55.1 53 45.3
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.6e-06 55.1 64 39.1
ECA236G3223 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.6e-06 55.1 47 46.8
ECA238G1046 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-06 55.1 58 37.9
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 5.6e-06 55.1 56 41.1
CAN.G929.35 Capsicum annuum HOM05D014102 ORTHO05D016168 7.3e-06 54.7 49 44.9
COL.COLO4_12322 Corchorus olitorius HOM05D015139 ORTHO05D013281 7.3e-06 54.7 59 45.8
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 7.3e-06 54.7 62 45.2
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 54.7 57 36.8
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 54.7 88 29.5
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 54.7 52 42.3
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 54.7 99 33.3
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 7.3e-06 54.7 54 42.6
SHI25069 Sapria himalayana HOM05D000004 ORTHO05D000002 7.3e-06 54.7 54 42.6
HanXRQChr08g0211671 Helianthus annuus HOM05D046019 ORTHO05D000002 9.5e-06 54.3 61 34.4
Manes.11G130716 Manihot esculenta HOM05D000004 ORTHO05D000002 9.5e-06 54.3 62 41.9
PSO063G2309 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 56 37.5
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 55 41.8
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 89 29.2
PSO339G1921 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 54 35.2
PSO541G1232 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 55 40.0
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 61 41.0
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-06 54.3 55 41.8
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 9.5e-06 54.3 55 40.0
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 9.5e-06 54.3 72 37.5
vmacro07154 Vaccinium macrocarpon HOM05D002389 ORTHO05D003227 9.5e-06 54.3 62 40.3


User provided reference genes

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