Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.5e-74 281.6 145 100.0
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 5.0e-73 277.7 145 97.9
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.1e-72 276.6 145 97.2
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.9e-72 275.8 145 96.6
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 3.3e-72 275.0 145 96.6
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 5.6e-72 274.2 145 96.6
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 7.3e-72 273.9 145 96.6
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.2e-71 273.1 145 95.2
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.2e-71 273.1 145 95.2
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.2e-71 273.1 145 95.9
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.6e-71 272.7 145 95.2
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 3.6e-71 271.6 145 94.5
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.4e-70 269.6 145 93.8
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 4.0e-70 268.1 145 93.1
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.8e-70 267.3 145 93.8
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.4e-69 264.6 145 93.1
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 7.5e-69 263.8 145 91.7
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 2.9e-68 261.9 145 91.0
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 2.9e-68 261.9 145 91.0
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 2.9e-68 261.9 145 91.0
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 2.9e-68 261.9 145 91.0
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 2.9e-68 261.9 145 91.0
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.9e-67 259.2 145 90.3
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.5e-64 249.6 145 86.9
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 7.3e-64 247.3 145 88.3
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.4e-62 243.0 145 84.1
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 5.2e-62 241.1 146 83.6
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 84.8
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.0e-61 239.2 145 84.1
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 2.6e-61 238.8 145 83.4
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 3.4e-61 238.4 143 83.9
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 3.4e-61 238.4 143 83.9
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 82.8
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.3e-60 236.5 158 79.7
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.7e-60 235.0 146 84.2
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 82.8
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 1.9e-59 232.6 145 81.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.4e-59 232.3 145 81.4
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 81.4
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 80.0
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 9.2e-59 230.3 145 82.1
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 9.2e-59 230.3 145 80.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-58 229.9 134 85.1
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 79.3
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.1e-58 229.2 145 80.7
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.7e-58 228.8 147 81.6
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 82.1
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 80.7
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 80.7
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.6e-58 228.0 145 80.7
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 6.0e-58 227.6 147 78.9
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 7.8e-58 227.3 143 80.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 80.0
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.0e-57 226.9 143 80.4
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.3e-57 226.5 132 85.6
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.3e-57 226.5 146 80.1
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.7e-57 226.1 132 85.6
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.3e-57 225.7 146 80.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.3e-57 225.7 147 78.2
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.3e-57 225.7 141 79.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.9e-57 224.9 145 81.4
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 5.1e-57 224.6 146 78.8
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 6.6e-57 224.2 142 79.6
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.6e-57 223.8 146 79.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 8.6e-57 223.8 146 79.5
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 80.7
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.1e-56 223.4 146 79.5
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.1e-56 223.4 145 82.1
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.1e-56 223.4 147 77.6
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.1e-56 223.4 144 81.2
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.5e-56 223.0 146 78.1
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 2.5e-56 222.2 146 80.8
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.3e-56 221.5 143 79.0
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.6e-56 221.1 146 79.5
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 9.5e-56 220.3 142 80.3
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.2e-55 219.9 145 81.4
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.8e-55 218.8 145 77.9
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 2.8e-55 218.8 146 79.5
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.1e-54 216.9 130 83.8
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 1.1e-54 216.9 147 79.6
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 2.4e-54 215.7 130 83.1
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 3.1e-54 215.3 147 77.6
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.2e-53 213.4 147 79.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 77.2
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 2.6e-53 212.2 147 76.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 76.9
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 4.4e-53 211.5 143 79.0
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 9.9e-53 210.3 147 78.2
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.3e-52 209.9 145 75.9
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.2e-52 209.1 148 75.7
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.2e-52 209.1 147 78.2
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 2.2e-52 209.1 145 77.9
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 2.2e-52 209.1 147 78.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.9e-52 208.8 145 75.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 4.9e-52 208.0 145 74.5
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 8.4e-52 207.2 145 74.5
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.1e-51 206.8 123 82.1
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.9e-51 206.1 146 76.0
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.2e-51 205.3 147 76.9
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.1e-51 204.9 146 76.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.1e-51 204.9 147 76.9
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 5.4e-51 204.5 147 75.5
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 7.1e-51 204.1 144 77.1
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 7.1e-51 204.1 147 77.6
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.6e-50 203.0 146 75.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 2.1e-50 202.6 145 75.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.1e-50 202.6 143 75.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 2.1e-50 202.6 153 73.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.7e-50 202.2 147 75.5
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 3.5e-50 201.8 136 80.1
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 6.0e-50 201.1 146 76.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 6.0e-50 201.1 146 76.7
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 6.0e-50 201.1 146 76.7
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-49 200.3 146 73.3
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.0e-49 200.3 146 73.3
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-49 199.5 133 81.2
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.3e-49 199.1 143 75.5
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.1e-48 196.8 201 57.2
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.1e-48 196.8 128 79.7
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 146 72.6
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.5e-48 195.7 148 75.0
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.3e-48 194.9 145 73.1
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 5.6e-48 194.5 144 73.6
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 9.6e-48 193.7 146 74.7
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 9.6e-48 193.7 146 74.7
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 9.6e-48 193.7 146 74.7
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.2e-47 193.4 148 72.3
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.6e-47 193.0 147 71.4
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 2.1e-47 192.6 148 72.3
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 8.1e-47 190.7 145 73.8
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.1e-46 190.3 151 70.9
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 3.4e-45 185.3 183 60.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 4.4e-45 184.9 121 81.8
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.6e-45 184.1 145 69.7
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.2e-44 182.6 168 61.3
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.4e-43 179.9 143 69.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 4.2e-43 178.3 145 69.7
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 9.3e-43 177.2 150 68.0
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-42 176.8 145 70.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.5e-42 175.3 145 68.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.8e-42 174.1 145 66.9
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.3e-41 173.3 145 66.2
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.7e-41 172.9 155 65.2
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 3.0e-41 172.2 146 68.5
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.9e-40 169.5 95 86.3
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 1.9e-40 169.5 133 72.2
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.3e-40 167.5 133 69.2
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 2.8e-39 165.6 141 68.8
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 8.1e-39 164.1 137 70.8
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.4e-38 162.5 111 77.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.0e-38 161.8 123 75.6
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 5.3e-38 161.4 123 75.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-37 160.2 125 73.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.5e-37 159.8 91 84.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 5.8e-37 157.9 132 65.9
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 9.9e-37 157.1 144 63.2
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 3.2e-35 152.1 115 74.8
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 8.7e-33 144.1 123 68.3
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 4.3e-32 141.7 98 75.5
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.3e-31 140.2 104 76.0
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.8e-31 139.0 99 76.8
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.1e-30 137.1 82 78.0
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 9.0e-30 134.0 123 60.2
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 3.8e-28 128.6 143 52.4
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 6.4e-28 127.9 134 56.7
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.3e-25 120.2 107 70.1
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.0e-25 119.0 120 60.8
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.0e-25 119.0 120 60.8
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 5.1e-25 118.2 69 79.7
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 6.7e-25 117.9 101 71.3
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-24 116.7 64 85.9
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 4.8e-23 111.7 82 72.0
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 6.2e-23 111.3 131 52.7
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-22 110.2 136 50.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.8e-22 109.8 145 51.0
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-22 109.4 76 75.0
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-22 109.4 77 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.4e-19 100.1 83 62.7
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 7.1e-19 97.8 81 66.7
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 8.7e-17 90.9 45 88.9
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 6.9e-14 81.3 76 64.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
AagrBONN_evm.TU.Sc2ySwM_362.1258 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.9e-06 54.7 98 43.9


User provided reference genes

Program Settings