Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g01590 Schrenkiella parvula HOM05D000855 ORTHO05D001716 3.5e-268 927.9 549 100.0
BcaC08g44451 Brassica carinata HOM05D000855 ORTHO05D001716 3.8e-113 412.9 485 54.4
BolC6t37101H Brassica oleracea HOM05D000855 ORTHO05D001716 3.8e-113 412.9 485 54.4
BcaB02g07949 Brassica carinata HOM05D000855 ORTHO05D001716 2.1e-111 407.1 469 59.3
C06p19000 Brassica napus HOM05D000855 ORTHO05D001716 1.4e-110 404.4 485 53.8
A07p20230 Brassica napus HOM05D000855 ORTHO05D001716 7.4e-109 398.7 485 59.0
Thhalv10027630m.g Eutrema salsugineum HOM05D000855 ORTHO05D001716 2.2e-108 397.1 506 59.1
AL7G49610 Arabidopsis lyrata HOM05D000855 ORTHO05D001716 1.5e-106 391.0 564 50.5
CARHR261750 Cardamine hirsuta HOM05D000855 ORTHO05D001716 3.0e-102 376.7 535 52.3
AT5G40340 Arabidopsis thaliana HOM05D000855 ORTHO05D001716 1.7e-100 370.9 494 52.0
BraA07t29724Z Brassica rapa HOM05D000855 ORTHO05D001716 5.9e-98 362.5 445 57.3
Carub.0007s3528 Capsella rubella HOM05D000855 ORTHO05D001716 1.6e-95 354.4 507 53.3
THA.LOC104805390 Tarenaya hassleriana HOM05D000855 ORTHO05D001716 4.6e-58 229.9 504 41.5
Sp2g16900 Schrenkiella parvula HOM05D000855 ORTHO05D001716 2.5e-56 224.2 477 37.7
Aa31LG9G1290 Aethionema arabicum HOM05D000855 ORTHO05D001716 2.5e-48 197.6 593 37.6
Carub.0005s0638 Capsella rubella HOM05D000855 ORTHO05D001716 2.5e-48 197.6 496 32.1
AL5G17342 Arabidopsis lyrata HOM05D000855 ORTHO05D001716 7.3e-48 196.1 470 34.3
AT3G27860 Arabidopsis thaliana HOM05D000855 ORTHO05D001716 4.0e-46 190.3 496 33.9
Thhalv10005709m.g Eutrema salsugineum HOM05D000855 ORTHO05D001716 1.2e-42 178.7 476 33.6
BcaC06g30957 Brassica carinata HOM05D000855 ORTHO05D001716 1.3e-36 158.7 459 32.9
C07p19900 Brassica napus HOM05D023722 ORTHO05D016766 6.4e-28 129.8 145 50.3
BolC7t42509H Brassica oleracea HOM05D023722 ORTHO05D016766 6.4e-28 129.8 145 50.3
Manes.15G166000 Manihot esculenta HOM05D000855 ORTHO05D001716 2.8e-23 114.4 485 29.1
Duzib187G0729 Durio zibethinus HOM05D000855 ORTHO05D001716 1.4e-22 112.1 473 27.9
Cpa.g.sc272.1 Carica papaya HOM05D000855 ORTHO05D001716 3.1e-22 110.9 475 26.9
Gorai.012G062400 Gossypium raimondii HOM05D000855 ORTHO05D001716 1.2e-21 109.0 470 27.7
Gohir.D04G055600 Gossypium hirsutum HOM05D000855 ORTHO05D001716 1.5e-21 108.6 467 27.4
Duzib147G0205 Durio zibethinus HOM05D000855 ORTHO05D001716 4.5e-21 107.1 466 26.6
QL02p075970 Quercus lobata HOM05D000855 ORTHO05D001716 9.9e-21 105.9 489 26.6
Gohir.A05G358500 Gossypium hirsutum HOM05D000855 ORTHO05D001716 1.3e-20 105.5 468 27.6
Phvul.008G155500 Phaseolus vulgaris HOM05D000855 ORTHO05D001716 1.3e-20 105.5 478 27.0
COL.COLO4_29000 Corchorus olitorius HOM05D000855 ORTHO05D001716 2.2e-20 104.8 529 26.1
Glyma.16G073200 Glycine max HOM05D000855 ORTHO05D001716 5.5e-19 100.1 478 25.5
Lalb_Chr17g0337301 Lupinus albus HOM05D000855 ORTHO05D001716 1.2e-18 99.0 461 26.9
Eucgr.I01513 Eucalyptus grandis HOM05D000855 ORTHO05D001716 7.9e-18 96.3 508 25.8
Glyma.19G065400 Glycine max HOM05D000855 ORTHO05D001716 2.3e-17 94.7 502 25.3
PGR083G1200 Punica granatum HOM05D000855 ORTHO05D001716 3.9e-17 94.0 448 26.8
Thecc.04G011500 Theobroma cacao HOM05D000855 ORTHO05D001716 5.1e-17 93.6 514 24.5
TWI12G0146 Tripterygium wilfordii HOM05D000855 ORTHO05D001716 8.7e-17 92.8 171 34.5
BcaC06g33778 Brassica carinata HOM05D000855 ORTHO05D001716 1.1e-16 92.4 234 36.3
C07p37020 Brassica napus HOM05D000855 ORTHO05D001716 1.1e-16 92.4 234 36.3
BolC7t44214H Brassica oleracea HOM05D000855 ORTHO05D001716 1.1e-16 92.4 234 36.3
Sabra04G0087000 Salix brachista HOM05D000855 ORTHO05D001716 1.1e-16 92.4 472 25.2
CARHR149330 Cardamine hirsuta HOM05D000855 ORTHO05D001716 1.5e-16 92.0 88 48.9
BraA06t27007Z Brassica rapa HOM05D000855 ORTHO05D001716 2.5e-16 91.3 241 36.5
TWI56G0295 Tripterygium wilfordii HOM05D000855 ORTHO05D001716 2.5e-16 91.3 171 34.5
arahy.Tifrunner.gnm1.ann1.ALQ29C Arachis hypogaea HOM05D000855 ORTHO05D001716 3.3e-16 90.9 416 25.2
MD09G1031100 Malus domestica HOM05D000855 ORTHO05D001716 3.3e-16 90.9 519 29.5
A06p40850 Brassica napus HOM05D000855 ORTHO05D001716 9.6e-16 89.4 239 35.1
BcaC01g06502 Brassica carinata HOM05D000106 ORTHO05D000160 3.7e-15 87.4 144 36.1
Cfa007413 Carpinus fangiana HOM05D000855 ORTHO05D001716 4.8e-15 87.0 535 25.4
Potri.004G130600 Populus trichocarpa HOM05D000855 ORTHO05D001716 4.8e-15 87.0 469 24.7
VMungo1383G3683 Vigna mungo HOM05D000855 ORTHO05D001716 1.4e-14 85.5 482 26.3
C03p13370 Brassica napus HOM05D000106 ORTHO05D000160 1.8e-14 85.1 140 37.1
BolC3t13799H Brassica oleracea HOM05D000106 ORTHO05D000160 1.8e-14 85.1 140 37.1
Prupe.3G286500 Prunus persica HOM05D000855 ORTHO05D001716 1.8e-14 85.1 503 25.2
Ciclev10014124m.g Citrus clementina HOM05D000855 ORTHO05D001716 3.1e-14 84.3 448 28.6
Haze_14689 Corylus avellana HOM05D000855 ORTHO05D001716 4.5e-13 80.5 558 28.1
RcHm_v2.0_Chr2g0172271 Rosa chinensis HOM05D000855 ORTHO05D001716 1.0e-12 79.3 439 25.5
FAN09G2467 Fragaria x ananassa HOM05D000855 ORTHO05D001716 1.3e-12 79.0 482 25.3
Sopen02g031510 Solanum pennellii HOM05D000855 ORTHO05D001716 1.7e-12 78.6 504 24.8
FAN05G0881 Fragaria x ananassa HOM05D000855 ORTHO05D001716 3.8e-12 77.4 480 24.2
CSS0035274 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 4.9e-12 77.0 341 24.9
Hma1.2p1_0993F.1_g245380 Hydrangea macrophylla HOM05D000855 ORTHO05D001716 4.9e-12 77.0 483 24.4
FAN02G1078 Fragaria x ananassa HOM05D000855 ORTHO05D001716 6.5e-12 76.6 481 25.2
Atru.chr9.2483 Acer truncatum HOM05D000855 ORTHO05D008469 1.1e-11 75.9 154 33.8
Glyma.05G006200 Glycine max HOM05D000855 ORTHO05D001716 1.1e-11 75.9 448 25.7
Nitab4.5_0008510g0010 Nicotiana tabacum HOM05D000855 ORTHO05D001716 1.1e-11 75.9 526 24.7
Dinv33478 Davidia involucrata HOM05D000855 ORTHO05D001716 1.4e-11 75.5 383 24.5
FvH4_6g50890 Fragaria vesca HOM05D000855 ORTHO05D001716 1.4e-11 75.5 466 24.9
FAN14G0543 Fragaria x ananassa HOM05D000855 ORTHO05D001716 1.4e-11 75.5 466 24.9
Lalb_Chr06g0175941 Lupinus albus HOM05D000855 ORTHO05D001716 3.2e-11 74.3 522 23.6
Actinidia35751 Actinidia chinensis HOM05D000855 ORTHO05D001716 5.5e-11 73.6 145 33.1
arahy.Tifrunner.gnm1.ann1.XTK520 Arachis hypogaea HOM05D000855 ORTHO05D001716 5.5e-11 73.6 160 34.4
CSS0017800 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D001716 7.1e-11 73.2 413 25.2
vmacro18258 Vaccinium macrocarpon HOM05D000855 ORTHO05D001716 7.1e-11 73.2 417 23.5
arahy.Tifrunner.gnm1.ann1.S449H3 Arachis hypogaea HOM05D000855 ORTHO05D001716 1.6e-10 72.0 427 23.9
Peaxi162Scf00129g01229 Petunia axillaris HOM05D000855 ORTHO05D001716 1.6e-10 72.0 166 30.7
Atru.chr6.2318 Acer truncatum HOM05D000855 ORTHO05D001716 2.1e-10 71.6 477 27.5
Nitab4.5_0014517g0020 Nicotiana tabacum HOM05D000855 ORTHO05D001716 4.6e-10 70.5 526 24.5
Gohir.D06G177900 Gossypium hirsutum HOM05D000855 ORTHO05D008469 1.0e-09 69.3 160 32.5
Gohir.A06G170100 Gossypium hirsutum HOM05D000855 ORTHO05D008469 1.8e-09 68.6 160 30.6
Gorai.N007400 Gossypium raimondii HOM05D000855 ORTHO05D008469 1.8e-09 68.6 160 31.9
MSTRG.24025 Avicennia marina HOM05D000855 ORTHO05D001716 3.0e-09 67.8 465 23.2
CAN.G206.19 Capsicum annuum HOM05D000855 ORTHO05D001716 3.0e-09 67.8 422 22.7
COL.COLO4_21664 Corchorus olitorius HOM05D000855 ORTHO05D008469 3.0e-09 67.8 159 28.3
Lj1g0022369 Lotus japonicus HOM05D000855 ORTHO05D001716 3.0e-09 67.8 517 23.2
PGSC0003DMG400000489 Solanum tuberosum HOM05D000855 ORTHO05D001716 3.0e-09 67.8 504 23.2
Psat1g056360 Pisum sativum HOM05D000855 ORTHO05D001716 6.7e-09 66.6 378 23.8
GSVIVG01032455001 Vitis vinifera HOM05D000855 ORTHO05D001716 6.7e-09 66.6 73 42.5
CiPaw.04G026000 Carya illinoinensis HOM05D000855 ORTHO05D001716 8.7e-09 66.2 522 26.6
Rhsim08G0053500 Rhododendron simsii HOM05D000855 ORTHO05D001716 8.7e-09 66.2 323 24.8
Manes.14G065400 Manihot esculenta HOM05D000855 ORTHO05D008469 1.1e-08 65.9 154 28.6
Lj7C593G6 Lonicera japonica HOM05D000855 ORTHO05D001716 1.9e-08 65.1 500 24.0
Glyma.19G006600 Glycine max HOM05D000855 ORTHO05D001716 3.3e-08 64.3 454 22.9
Hund02451 Selenicereus undatus HOM05D000855 ORTHO05D001716 3.3e-08 64.3 484 24.4
Cpa.g.c30444 Carica papaya HOM05D000855 ORTHO05D008469 5.7e-08 63.5 158 28.5
Nn4g22754 Nelumbo nucifera HOM05D000855 ORTHO05D001716 5.7e-08 63.5 537 25.0
Cc07_g02060 Coffea canephora HOM05D000855 ORTHO05D001716 7.4e-08 63.2 500 22.4
TWI23G1303 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 7.4e-08 63.2 152 30.9
Lj2g0009611 Lotus japonicus HOM05D000855 ORTHO05D001716 9.6e-08 62.8 515 21.0
Duzib106G2025 Durio zibethinus HOM05D000855 ORTHO05D008469 1.3e-07 62.4 156 28.2
CiPaw.12G026700 Carya illinoinensis HOM05D000855 ORTHO05D008469 1.6e-07 62.0 171 26.9
TWI14G0012 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 1.6e-07 62.0 150 30.7
Psat5g106400 Pisum sativum HOM05D000855 ORTHO05D008469 2.1e-07 61.6 153 30.7
Sabra12G0058300 Salix brachista HOM05D000855 ORTHO05D008469 2.8e-07 61.2 155 29.0
Thecc.10G121100 Theobroma cacao HOM05D000855 ORTHO05D008469 2.8e-07 61.2 156 26.9
GSVIVG01007736001 Vitis vinifera HOM05D000855 ORTHO05D008469 2.8e-07 61.2 152 28.9
SHI22284 Sapria himalayana HOM05D000855 ORTHO05D001716 4.8e-07 60.5 165 29.7
TAR371G0869 Trochodendron aralioides HOM05D000855 ORTHO05D001716 4.8e-07 60.5 171 29.8
CSS0023112 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D001716 1.1e-06 59.3 338 24.6
TAR374G0945 Trochodendron aralioides HOM05D000855 ORTHO05D008469 1.1e-06 59.3 171 26.9
Oeu004722.1 Olea europaea HOM05D000855 ORTHO05D001716 1.8e-06 58.5 378 23.5
MBI10_g28018_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D001716 2.4e-06 58.2 143 32.9
THA.LOC104821475 Tarenaya hassleriana HOM05D000855 ORTHO05D008469 3.1e-06 57.8 150 30.0
CSS0004279 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 4.1e-06 57.4 169 26.0
Manes.06G105300 Manihot esculenta HOM05D000855 ORTHO05D008469 4.1e-06 57.4 158 27.8
Potri.012G081500 Populus trichocarpa HOM05D000855 ORTHO05D008469 4.1e-06 57.4 155 27.7
CSS0039177 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 9.0e-06 56.2 169 25.4
Eucgr.B00304 Eucalyptus grandis HOM05D000855 ORTHO05D008469 9.0e-06 56.2 152 30.9


User provided reference genes

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