Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 0.0e+00 1158.3 563 100.0
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 0.0e+00 1132.1 563 96.8
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 0.0e+00 1118.6 563 95.7
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 0.0e+00 1118.2 563 96.1
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 0.0e+00 1117.4 563 95.4
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 0.0e+00 1116.7 563 95.6
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 0.0e+00 1115.9 563 95.6
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 0.0e+00 1112.4 563 95.7
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 0.0e+00 1109.7 563 94.7
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 0.0e+00 1100.9 571 94.0
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 0.0e+00 1078.9 563 91.7
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 1.1e-296 1022.7 557 88.3
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 5.7e-290 1000.3 560 83.8
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 9.7e-290 999.6 549 85.1
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 1.7e-289 998.8 549 84.9
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 4.8e-289 997.3 550 85.8
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.1e-288 996.1 550 85.8
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.4e-288 995.7 550 85.5
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 1.8e-288 995.3 549 85.1
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.4e-288 995.0 550 85.6
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 3.1e-288 994.6 549 85.1
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 7.0e-288 993.4 549 85.2
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 9.1e-288 993.0 549 84.9
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 3.5e-287 991.1 549 84.9
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 7.7e-287 989.9 549 84.9
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 1.9e-285 985.3 551 84.8
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 2.5e-285 984.9 552 82.6
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 3.2e-285 984.6 549 84.3
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 1.2e-284 982.6 553 85.0
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 2.7e-284 981.5 556 82.0
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 3.6e-284 981.1 559 83.2
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 1.0e-283 979.5 552 82.8
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 1.8e-283 978.8 549 83.6
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 3.0e-283 978.0 549 83.1
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 4.0e-283 977.6 564 81.7
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 4.0e-283 977.6 549 83.1
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 4.0e-283 977.6 568 80.5
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 2.0e-282 975.3 549 83.1
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 2.0e-282 975.3 551 84.8
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 9.8e-282 973.0 549 83.1
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 2.2e-281 971.8 549 82.7
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 2.8e-281 971.5 553 82.6
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 3.7e-281 971.1 552 83.0
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 3.7e-281 971.1 549 82.5
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 6.3e-281 970.3 549 82.3
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 6.3e-281 970.3 549 83.1
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 8.3e-281 969.9 549 82.9
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 7.0e-280 966.8 552 81.9
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 9.1e-280 966.5 551 82.0
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 3.5e-279 964.5 549 81.6
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 4.5e-279 964.1 564 81.2
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 7.7e-279 963.4 549 82.3
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.0e-278 963.0 546 82.8
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.0e-278 963.0 549 82.0
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 2.3e-278 961.8 549 82.1
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 1.1e-277 959.5 549 81.4
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.5e-277 959.1 549 82.1
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 1.9e-277 958.7 551 82.4
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 4.2e-277 957.6 549 81.6
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 4.2e-277 957.6 553 80.8
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 2.1e-276 955.3 573 79.1
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 2.8e-276 954.9 552 82.1
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 2.8e-276 954.9 552 80.6
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.6e-276 954.5 549 81.4
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 3.6e-276 954.5 548 82.1
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 6.1e-276 953.7 552 80.4
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 6.1e-276 953.7 549 81.1
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 2.3e-275 951.8 549 81.1
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 4.0e-275 951.0 547 81.5
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.4e-274 948.0 542 81.7
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 9.8e-274 946.4 549 80.7
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 9.8e-274 946.4 549 80.7
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 1.3e-273 946.0 547 81.5
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 2.8e-273 944.9 549 80.1
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 2.8e-273 944.9 579 77.2
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 2.8e-273 944.9 546 81.3
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 1.1e-272 943.0 548 80.1
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.5e-271 937.9 555 79.3
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 5.0e-270 934.1 549 79.8
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 1.5e-269 932.6 546 80.2
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 9.5e-269 929.9 546 79.1
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 1.2e-268 929.5 550 79.5
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.0e-267 926.4 549 78.9
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 6.8e-267 923.7 549 78.9
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 8.9e-267 923.3 569 77.3
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 1.5e-266 922.5 569 76.3
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 3.4e-266 921.4 541 80.2
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 5.8e-266 920.6 544 79.6
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 1.7e-265 919.1 543 80.3
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 3.2e-264 914.8 545 78.2
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 3.2e-264 914.8 499 86.0
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 2.3e-262 908.7 549 78.1
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 3.9e-262 907.9 554 78.9
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 2.5e-261 905.2 513 83.0
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 6.2e-260 900.6 542 78.0
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.5e-253 878.6 552 76.4
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 1.2e-252 876.3 549 77.2
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 9.9e-250 866.7 545 75.0
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 3.7e-249 864.8 543 75.0
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.3e-246 856.3 549 74.1
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 1.1e-245 853.2 497 78.7
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.9e-245 852.4 538 74.3
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.5e-245 852.0 538 74.3
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 4.3e-245 851.3 555 74.6
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 1.6e-244 849.4 549 74.1
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 7.6e-242 840.5 559 71.9
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 3.0e-238 828.6 550 71.6
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 2.2e-233 812.4 555 72.6
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 6.6e-230 800.8 544 71.9
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 4.8e-228 794.7 455 83.5
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 5.3e-227 791.2 503 75.1
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 3.8e-225 785.0 549 68.7
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 3.3e-221 771.9 552 68.8
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 7.4e-221 770.8 541 68.2
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 1.3e-220 770.0 539 66.6
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 1.1e-219 766.9 423 85.6
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 1.0e-214 750.4 424 83.7
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.2e-210 736.9 532 66.4
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 1.4e-208 729.9 540 64.8
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.1e-205 720.3 535 64.9
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.8e-198 694.1 531 63.8
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.8e-198 694.1 531 63.8
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 1.4e-190 670.2 609 59.1
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 1.1e-163 580.9 330 83.6
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 4.2e-160 568.9 334 80.2
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 2.9e-153 546.2 555 55.0
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 5.0e-145 518.8 292 84.6
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 8.6e-145 518.1 546 49.3
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 8.3e-132 474.9 306 73.5
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 6.2e-127 458.8 309 72.5
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 2.3e-121 440.3 350 64.6
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.0e-100 371.7 199 87.4
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.4e-91 341.3 200 82.5
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.7e-84 317.8 515 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 7.7e-69 265.8 335 43.9
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 8.0e-58 229.2 129 86.0
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 4.4e-56 223.4 137 80.3
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 4.4e-56 223.4 133 81.2
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 2.8e-55 220.7 139 74.1
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 1.6e-53 214.9 127 82.7
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 1.6e-53 214.9 127 82.7
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 1.1e-51 208.8 120 83.3
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 1.1e-51 208.8 120 83.3
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 5.2e-49 199.9 109 79.8
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 1.2e-48 198.7 119 81.5
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 1.2e-48 198.7 119 81.5
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 3.7e-47 193.7 111 77.5
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.8e-46 191.4 114 74.6
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.6e-44 183.0 119 72.3
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 2.6e-40 171.0 95 78.9
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 5.0e-36 156.8 76 92.1
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 6.0e-29 133.3 79 81.0
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 2.6e-24 117.9 189 41.8
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 7.5e-24 116.3 118 48.3
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 7.5e-24 116.3 86 62.8
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 6.4e-23 113.2 121 48.8
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 4.3e-19 100.5 62 69.4
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 5.1e-12 77.0 63 61.9


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