Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 2.8e-228 795.0 434 100.0
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.3e-212 743.0 434 92.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 3.1e-211 738.4 434 89.2
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 5.0e-209 731.1 435 91.3
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 1.6e-207 726.1 435 90.6
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.1e-205 719.9 436 88.1
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 4.4e-205 718.0 435 88.3
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 2.2e-204 715.7 436 87.8
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.8e-204 715.3 430 88.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 7.7e-202 707.2 440 90.0
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.1e-192 676.8 434 85.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 9.5e-176 620.5 428 80.4
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 7.3e-168 594.3 433 75.1
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 2.9e-132 476.1 373 66.5
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.9e-132 475.3 380 65.8
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 3.0e-129 466.1 366 66.7
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 8.7e-129 464.5 367 65.9
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 8.7e-129 464.5 383 65.0
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.6e-127 460.3 370 65.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.8e-127 458.8 370 66.5
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.8e-126 456.8 407 62.2
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 4.0e-126 455.7 374 63.6
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 5.3e-126 455.3 380 63.2
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 9.0e-126 454.5 365 66.6
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.2e-125 454.1 343 67.3
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 5.8e-125 451.8 375 63.2
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.0e-124 451.1 345 67.0
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.0e-124 451.1 345 66.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.3e-124 450.7 345 67.0
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.7e-124 450.3 375 63.2
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.7e-124 450.3 371 63.6
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.9e-124 449.5 346 66.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 3.8e-124 449.1 374 65.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 8.4e-124 448.0 376 63.8
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.1e-123 447.6 346 66.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.4e-123 447.2 373 64.1
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.9e-123 446.8 375 63.2
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.9e-123 446.8 433 56.8
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.5e-123 446.4 371 62.5
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.2e-123 446.0 373 61.7
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 5.5e-123 445.3 382 63.6
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.2e-122 444.1 383 63.4
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 2.7e-122 443.0 382 63.1
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.3e-121 440.7 344 64.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 2.3e-121 439.9 371 62.3
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.5e-120 437.2 383 62.1
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.9e-120 436.8 347 66.0
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.9e-120 436.8 346 65.3
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.3e-120 436.0 374 62.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 7.4e-120 434.9 356 63.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 9.6e-120 434.5 371 61.7
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 9.6e-120 434.5 380 62.9
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 9.6e-120 434.5 370 61.4
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.6e-119 433.7 374 59.6
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.6e-119 433.7 380 62.6
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 8.2e-119 431.4 383 59.8
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 8.2e-119 431.4 378 61.6
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 1.1e-118 431.0 369 62.9
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.1e-118 431.0 344 65.4
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.8e-118 430.3 348 65.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 2.4e-118 429.9 373 61.4
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 5.3e-118 428.7 376 61.2
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.6e-117 426.4 365 61.4
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 5.8e-117 425.2 380 61.6
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.8e-117 425.2 333 65.5
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 5.8e-117 425.2 348 65.2
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.9e-116 422.9 376 59.0
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 3.8e-116 422.5 381 60.9
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 3.8e-116 422.5 421 55.6
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 5.0e-116 422.2 376 59.3
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 6.5e-116 421.8 370 58.9
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.9e-115 420.2 375 59.5
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 4.2e-115 419.1 377 59.2
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 2.7e-114 416.4 343 62.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 6.1e-114 415.2 375 59.2
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 6.1e-114 415.2 375 58.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 1.0e-113 414.5 337 64.4
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.0e-113 412.9 370 58.9
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 7.4e-112 408.3 376 57.2
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 9.7e-112 407.9 312 68.9
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 9.7e-112 407.9 375 58.1
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.6e-111 407.1 343 61.8
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 2.2e-111 406.8 441 52.2
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 6.3e-111 405.2 373 60.6
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.1e-110 404.4 348 60.9
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.7e-108 397.1 367 57.2
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 8.5e-108 394.8 363 59.5
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-107 394.0 338 61.8
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.2e-106 391.0 379 58.3
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.5e-104 384.0 338 58.9
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 3.7e-103 379.4 379 56.2
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 3.3e-96 356.3 293 63.8
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.3e-92 344.4 241 71.8
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 2.8e-87 326.6 391 47.8
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 2.8e-87 326.6 363 51.2
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.8e-86 323.9 370 50.5
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.6e-85 320.1 356 50.0
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 3.8e-84 316.2 261 62.5
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 7.7e-77 292.0 343 50.4
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.2e-76 290.4 213 69.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 7.7e-69 265.4 210 67.1
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.7e-68 264.2 342 44.7
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 5.0e-68 262.7 206 66.5
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.6e-66 257.7 349 42.4
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 3.2e-62 243.4 345 42.6
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.2e-56 224.9 344 41.9
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 3.0e-52 210.3 224 49.6
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 3.4e-40 170.2 174 53.4
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 3.6e-34 150.2 175 49.7
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.4e-30 138.3 243 38.3
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.1e-25 120.6 77 75.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 7.3e-19 99.4 102 53.9
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 9.6e-19 99.0 93 57.0
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.4e-17 95.1 105 49.5
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 4.0e-17 93.6 119 49.6
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 9.0e-17 92.4 341 25.8
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.3e-15 88.6 199 30.7
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.0e-12 77.4 343 25.7


User provided reference genes

Program Settings